Array 1 2534895-2527845 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP072262.1 Kocuria rhizophila strain 28R2A-20 chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 2534894 28 100.0 33 ............................ GTCTGCGACCCACCCTGTAGCGGCCTGGTGTTC 2534833 28 100.0 33 ............................ TGTCCCCGGGGGACAACACCGGGTACGGGGTGC 2534772 28 100.0 33 ............................ TCCCCGTCCTGCCACACCATCGTGAATCCGAAC 2534711 28 100.0 33 ............................ GGCGCCCGTGTCAATCGCGCCCTGCAACGCGCC 2534650 28 100.0 33 ............................ TGGTGCGGGTCATGATGCGTTCTCCCTCTCCTG 2534589 28 100.0 33 ............................ CAGGTAACCGGCCGCGTAGTAGGGTTGCAGGAC 2534528 28 100.0 33 ............................ GGAGGTCACGGCATGACCGAGCGCACGTACACA 2534467 28 100.0 34 ............................ AGATGCCGCGGTGGACCTGGTGATGGCGATTTTC 2534405 28 100.0 33 ............................ CACGTGAACCTCACCCCCGACCAGGCGGAAACC 2534344 28 100.0 34 ............................ CCACCCCGTACACCGCGTCCTTGTACTGCGGGAA 2534282 28 100.0 33 ............................ CACCCTCCCCGGTGAAGCGGAAATCGAAGTTGC 2534221 28 100.0 33 ............................ TTGCTCTCCTGTTGGCCCCAGCAAGAATGTGGG 2534160 28 100.0 33 ............................ TGCCCCACGTGCGGCCGGTGGTGGAAGTACGGG 2534099 28 100.0 33 ............................ TTCCCGGCCCGTCTTGGCGAGCTGAACGATCAG 2534038 28 100.0 33 ............................ CGCCTCACCGCCCTGCGAGATGGACGACAAGAA 2533977 28 100.0 33 ............................ ACAATGATCGGGGCGTTCGCGTTAACTGCCGCG 2533916 28 100.0 33 ............................ CTGGCATGGAAAGGCACCCTCACCGACCGGGAA 2533855 28 100.0 33 ............................ ACGGCACGTAATACGCCGGGTTCGAGTTCCTCT 2533794 28 100.0 33 ............................ GGACGGGGCCCCCGCCGCCGGCGTCGATGAGCT 2533733 28 100.0 33 ............................ CGTCGGATCGTGCCCAGTGGGTGCAGGCGGGGC 2533672 28 100.0 33 ............................ ACCTGGAAGGTAACCAGCCACCTAGGGTCACGC 2533611 28 100.0 33 ............................ CGTTCAACCCGGTCACCGCCCCCGAGCAGTGGC 2533550 28 100.0 33 ............................ CCTCGTGCCGGCGGTCATCCGTGCACTCCGGCA 2533489 28 100.0 33 ............................ GGCAGACAAGGCAACCACGCCCACCACGGCTGA 2533428 28 100.0 33 ............................ CTCCACCTGCCCGCCCTGGTTGTGCTGCCCGAA 2533367 28 100.0 33 ............................ GCGTGCGGAGGGCGATGCCCGGGAGCCGGATTC 2533306 28 100.0 33 ............................ CCGCTGATCAACTCCCCCCGGTACATGGCACGG 2533245 28 100.0 33 ............................ CGCGGCCTTCAGACGCCGGGCGTCGTCACGGAC 2533184 28 100.0 33 ............................ CCCGCATGGTTGGTGGACCGGGGTTCACAGAAC 2533123 28 100.0 33 ............................ CGCCCTGGCCGGAAGATCCTCGTGTACTCGGGG 2533062 28 100.0 33 ............................ ACCGAAAACCTGCCCAGACGGGGCAGTGATCTC 2533001 28 100.0 33 ............................ GTTGACCGCGACAGCGGCGTCGGCACCGTTGGT 2532940 28 100.0 33 ............................ CACGCTGGTCGTGGTGAGCCGCACCATCACCTC 2532879 28 100.0 33 ............................ GTGGCACACGGACGTGCTCATGACCCACACGGA 2532818 28 100.0 33 ............................ CGGTGGCCCGGTGATGTCGGTGCAGATCGACGG 2532757 28 100.0 33 ............................ ACGGTGTCGTTCTAGACCCGGGGCGTGTGGTGG 2532696 28 100.0 33 ............................ CGATTTTCACCTGGTTGTACGTGAACGTCATCC 2532635 28 100.0 33 ............................ CCCACCACATAACCGAGAGACAAGGACAGGAAC 2532574 28 100.0 34 ............................ CGTGCCCGCCTGGTTGGACACCACCCTCGCCGAA 2532512 28 100.0 34 ............................ TCGTTGCCATGAGTCAGTCTCCTTAGAAGGCAGT 2532450 28 100.0 33 ............................ CCGGGTGCAGGGCAACCAGAATCCCATGCATTA 2532389 28 100.0 33 ............................ GCCATCCTCGAGTGAGCCGGTGACGTGGTGCAG 2532328 28 100.0 33 ............................ CGCGGCGTTCGGTGCGATCCAGACTGTGGTGGG 2532267 28 100.0 33 ............................ GTCCTCCGCGTCCACGGCGGCGTCGGAGTCGAA 2532206 28 100.0 33 ............................ GGGGGGTCGGTCGCCGTGGCAGCAAGAGGAGTT 2532145 28 100.0 33 ............................ GTCGCGGAATGTGCACGGGAGACCGATGGAACT 2532084 28 100.0 33 ............................ GAAGAAGCCCACGATGGCCGGGACCCGATCCTG 2532023 28 100.0 33 ............................ GCCGTTGCCGCATGTCAGCGACCGGCATCGCGT 2531962 28 100.0 33 ............................ GCGTGGTCCAACAACTCACGGCCCTACGCGGGG 2531901 28 100.0 33 ............................ TCCCTGGGGCCAGGACCCCTGAACCTCCACCCG 2531840 28 100.0 33 ............................ GCTCGCGCTCGTGTCCACAGGTGTCGCATCTCT 2531779 28 100.0 33 ............................ CGCCTCGATCACGAACGCCTTGCGGTCCTGCAG 2531718 28 100.0 33 ............................ CTTCTGGGCTCAGGCCGCTGATCCGATCCGCGA 2531657 28 100.0 33 ............................ CGTCCCCGACGCGAGGTCCAGACCCGCCGGCAC 2531596 28 100.0 33 ............................ CCCCACCCTGGGCGGGGTCATTCAGGGCGGCGA 2531535 28 100.0 33 ............................ GATGCGGGAGTTCTACGGCTTCTCCTGAGTTTC 2531474 28 100.0 33 ............................ CTCGGGTGGTGGGACCGCGCAGTGGGGTGTGTA 2531413 28 100.0 33 ............................ CCGAACCCGCCCAGTGTTGAACGAGGTCTGCGC 2531352 28 100.0 33 ............................ CATGACCACCAGCATGGACCGCGCTATCCCGAA 2531291 28 100.0 33 ............................ CCGTCCCCACAGGGGCGTCCCACACCCCAGACA 2531230 28 100.0 33 ............................ CGGGTCACACGGTTCGCGCTGATCTGCAGGTTC 2531169 28 100.0 33 ............................ GCCTCGAAGGCTTCCGGGTTCTCCTTGTGGGCT 2531108 28 100.0 33 ............................ GGTCCACCGAGGAGATCACTTGGTGCGACATGG 2531047 28 100.0 33 ............................ GGGTCACCTTCATCTCCGTCTCCGTGATGCTTG 2530986 28 100.0 33 ............................ CTCGGGTGGTGGGACCGCGCAGTGGGGTGTGTA 2530925 28 100.0 33 ............................ CTTCACCCCGTCACCCGCCTCACGTGCACCTCG 2530864 28 100.0 33 ............................ CCGACGCCGAGCTCTTCGCCAGCAGACACGGCC 2530803 28 100.0 33 ............................ CGGGGTCTCGTGGACGATCGGGAGGAGCCCCCC 2530742 28 100.0 33 ............................ CTGATGGGCTCCTTCACGGCATCCTTCAGCTTG 2530681 28 100.0 33 ............................ CGCCGGGAACGTCGAGGCATGGCCCAAGTTCGT 2530620 28 100.0 33 ............................ GGAGACCTCCGCGGATCATGAACGTATCCGCGA 2530559 28 100.0 33 ............................ GGCGGGCACGGCGCAGGCGGCGGCGGACGGGAA 2530498 28 100.0 33 ............................ GTTGCTCGCCCTGTCTGGGAGGAACCCGTCATG 2530437 28 100.0 33 ............................ CTTCTTGGGGTCCTTGCCAGCGGCGATGTAGTT 2530376 28 100.0 33 ............................ GCACTTCGGGGGGCTGGGCATCTCTGGCCAGGA 2530315 28 100.0 33 ............................ CGCGGACGCCAGATCGAGGGCGTACCCCGTGAC 2530254 28 100.0 33 ............................ GATCCTTCTCCGCCTGAGCAATCGCCTCCCGAC 2530193 28 100.0 33 ............................ GCTCCCCAACACGGCCCTGGTGTTGGCTGTGCA 2530132 28 100.0 33 ............................ CCCCGTGTCCACCAGCCACGACGGCTTCCCGAA 2530071 28 100.0 33 ............................ AACGATGCGGGGTCGGCGTCTCGGGCGATCAAC 2530010 28 100.0 33 ............................ CCGCCACCGCACACGAGACTGCTCACGGTCGGC 2529949 28 100.0 33 ............................ CGGCAACTCCACCTCCGTGACGATCCACAGGTC 2529888 28 100.0 33 ............................ GACACCATCGCCCGGTGGATCAACCCCGCCACC 2529827 28 100.0 33 ............................ CCACGAAGGAGAACTGACCATGGCAGCACAGGC 2529766 28 100.0 33 ............................ GGAGAACTTCGCGGAGGGCTTCTTCCGGTCCGT 2529705 28 100.0 33 ............................ GTTGCCCGGCACACGGGCGGTCTTCACGGTGCC 2529644 28 100.0 33 ............................ GGGCGCGGGGCACAAGGCGCGTGCGGCGACTGT 2529583 28 100.0 33 ............................ TCGGCTGATGGCCGTCGACAGGTTCGCGAGCGC 2529522 28 100.0 33 ............................ GCCCTGCCAGCGCATCGACGTCGCCGACGAGGC 2529461 28 100.0 33 ............................ GTGGGAGCCCTCCGCGTCGAACTGGGCGCGGGT 2529400 28 100.0 33 ............................ CAACCCGCCGCGAAGTCCCACGAGCGGGCTGAG 2529339 28 100.0 33 ............................ GCCCAGCGCGTTCGTCGTGCTGCTGGCGCTAGC 2529278 28 100.0 33 ............................ GCCCAGCGCGTTCGTCGTGCTGCTGGCGCTAGC 2529217 28 100.0 33 ............................ CGTGGACGCCGAGCCCGAAGACCTCGAGGAGTT 2529156 28 100.0 33 ............................ GGCGGCCTCGGTGGTCATGACCACGGGCGCGGT 2529095 28 100.0 33 ............................ GATCAACGACTTCTGGAAGGGCGACGACATCAA 2529034 28 100.0 33 ............................ CGCGTCCTTCAGCAGTCCCAAACCGGCCTTGAA 2528973 28 100.0 33 ............................ GGCGGGGATGGACAAGCCTGGTGGGGGTCTGCC 2528912 28 100.0 33 ............................ CGGTCACGGGCTTCTTGCGGTACGTCTTGGGTT 2528851 28 96.4 33 .G.......................... GCGGTGGACGGGCAGGTGCAGCTGCAGCTGCCG 2528790 28 100.0 33 ............................ CCGCAGGGCAACCTGGTCGTTCTCGGCCAGGCT 2528729 28 100.0 33 ............................ TGCCCCGGATGCGGCGGGCGGGGTCCCTGGCCC 2528668 28 100.0 33 ............................ CTGGTCAGAGAGCGGAGATACGAGGATCACGGT 2528607 28 100.0 33 ............................ CGAGCGGAACTCGGCGGCGGCTTCCAGCGGCGA 2528546 28 100.0 33 ............................ GTCCGTGGCGCCGTGCAGCGCCCCGCCCTGGAA 2528485 28 100.0 34 ............................ CGCCCTACCCACCTCGGGGCGGGACAGCGCTGCG 2528423 28 100.0 33 ............................ GACGGTGCTCTCCAACACCTAGGCCGGGATTAA 2528362 28 100.0 33 ............................ CCCGCCCCGGTCCACGATGCCCTGCCCCAGGCC 2528301 28 100.0 33 ............................ GCTCGGCCCCGGCGTCCTCACCATCGGGGACAG 2528240 28 100.0 33 ............................ CTTCCGGGCTTCCTCCAGGGTCTCCCACTCGGT 2528179 28 100.0 33 ............................ CGGAGCGCCGGGGGACTCACAGAACTCGAACGC 2528118 28 100.0 33 ............................ CCTCCCCTCCCTGCCCCGCGGCAAGAGTTCAAA 2528057 28 100.0 33 ............................ CCGTTGCCGGTCACGTTCCGTCAACGGCTCCCC 2527996 28 100.0 33 ............................ GAGACCACCGCCGCGCTCGCGGCGATCCGCCCG 2527935 28 100.0 34 ............................ CGGCGGGGGCGGTTTCGGCTTGGCCGTCGAGCTG 2527873 28 89.3 0 .....................T...A.A | C [2527849] ========== ====== ====== ====== ============================ ================================== ================== 116 28 99.9 33 GTGCTCCCCGCGCCTGCGGGGATGAGCC # Left flank : CGACGACGCCATGTCGCTGTGGTCTGGTCGGCGTGAAGGCCGCATGCCGACGGGGCAGAACTTCTCTCGGGAGGACTCATGATCGTCTTGGTCCTCTCAGCCTGCCCGGTAGGGCTCCGTGGGGATCTGACGAAATGGCTGTACGAAGTCTCTGCCGGGGTTTTCGTAGGTAAAGTCAGTGCGCGGATTCGGGAGCACCTGTGGGAGCGAGTGCTGGAGTCATCTGGCTCGGGGCGGGCCATCCTTGTATGGAATGCCAGGGGAGAGCAGGGCTTGACGTTCTCTGTCAAGGACCACCACTGGGACCCAGTGGATCTCGATGGGTTGACCCTGATGAAACGCCCCTCGCGCACCAAGCCCCGATCTTCTCCCGAGCTCAGGCCGGGGTGGAGCAAAGCCGGTGCCCGTCGCAGGTTCGGCGACAAAAAGACCTGACCGCAAAAGTGTCGAAGTCAAAGGAAAAACACCCCTCGGGGGACAATAACCCCTAGTCACCAAGT # Right flank : CGGCCGGGACAAAACGGCGAGTTCCTCTTCCATTTAGTTGTGGACAACTAAAAATTGCACAACTATAATCAGTCGCGGTCGGGTCGCGTGGCACCCGCCCTGGTCTTGCCAGCCGAGCATCCAGGGTGGCCAGTAACGAGGGGCAGCGAAAAATCTGCACCCGTTTGCGGCATCGATGTCGGCGGGTCTCGGCACTTGGGGGGTCGAGGCCCGTCAGGATCACCAGTGAAAAGGAGTCGTCATGAACGTTCTGCACACCTCCGGTCGTCCTTTCCGGCGCAGTGCGCGGGCGGAAAACCCCGCCGCGCTCTCCCCCGCCCGCCACATCGTCCGCACGGCCCTCGGCGGCTTCCTGGCCTTCGCCGGCGTCAGCCACCTGACCTTCGCCCGTGACGAGTTCCAGGCCCAGGTTCCGAACTTCGTGCCCCTGGACACGGACGTCACCGTCCTCGCGTCCGGTGTGGTGGAGATTGCGCTGGGTGCCTCGCTGATCGCCGCCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCCTGCGGGGATGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCGTGCGGGGATGAGCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //