Array 1 1109090-1112137 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP067432.1 Chryseobacterium indoltheticum strain POL15 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 1109090 46 78.7 30 C.AT.T.G..T....T.-......A.T.................... CTACTCTACCCTTTCCAACCGTAGCAGCCG 1109166 47 100.0 30 ............................................... AAATGCGTTTACAATCTCTTTGGCGTTACC 1109243 47 100.0 30 ............................................... ATCGGGCAATTCATCTTTAGTCTCATAACC 1109320 47 100.0 30 ............................................... TTCTGCTGATTTTGGAGCATTAACAAGTAG 1109397 47 100.0 30 ............................................... AGAAATCAGCAGAAGATATTCAAAGCGCCT 1109474 47 100.0 30 ............................................... AGCTTTCACAAAAAGACGCTGAGCTTAACG 1109551 47 100.0 30 ............................................... GCAATGCCGTGACAACTAATAACAGATTTG 1109628 47 100.0 30 ............................................... TTCTAATTATGGTAACTCAAGGACTATCTT 1109705 47 100.0 30 ............................................... CTAAGTCTGAAGTTATCGAGGATGATTTTC 1109782 47 100.0 30 ............................................... AAATCAAGAAATAATGCGGGTACGCCCACT 1109859 47 100.0 30 ............................................... AACTTCCGTTTTTACTTCTCCAGCTGATTG 1109936 47 100.0 30 ............................................... ACCCGATAACGCCAGAAAACCAGGCGCTTT 1110013 47 100.0 30 ............................................... TCAGCACAAAATATCAACAATGCTTCAGGC 1110090 47 100.0 30 ............................................... CTTTACCGTTAAATCCAATTACACCGTCTT 1110167 47 100.0 30 ............................................... TCGGGGTGTTTTTATCTGTATCTCTACACA 1110244 47 100.0 30 ............................................... ATATCTGCGGTAAGGGGGTGAAGGACACGG 1110321 47 100.0 30 ............................................... AGCCAATTGCCAGGAAAGATGATGAGAATT 1110398 47 100.0 30 ............................................... TAGAGCAGATAGATCATAGTGGTCTGAGTA 1110475 47 100.0 30 ............................................... CTTCGCTATTCGCGATTTTTGAAATTCAGT 1110552 47 100.0 30 ............................................... TTACTCGACACGAGACACCTAACGTGTCAT 1110629 47 100.0 29 ............................................... GAAACACAAAATAAACAATTAGTTTTTAT 1110705 47 100.0 30 ............................................... TGCGACACAGGAAGATTAGAAATTCTTCTG 1110782 47 100.0 30 ............................................... ATGAATTAGGAAAGGAAGCTGAAATGGATC 1110859 47 100.0 30 ............................................... TACTCTTTTAACACCTTGAGCGTCTTGAGA 1110936 47 100.0 30 ............................................... CAGGCGGGATTACGATTTGGAGGCCAAACA 1111013 47 100.0 30 ............................................... ATCTAAATCTAAAAAGACAAAAGAAGCTTT 1111090 47 100.0 30 ............................................... TGGAATTAAATGGAGTTCCTTTTGTTCCTG 1111167 47 100.0 30 ............................................... ACTGCGCCGAAAATATGGAACATTTTATTT 1111244 47 100.0 30 ............................................... AGCGGTCCAGCGGGTTTGGCCCCACGACTA 1111321 47 100.0 30 ............................................... GGAGCATTCTAAAGCGTGCCGGGAAATGGT 1111398 47 100.0 30 ............................................... GAGAACAAAATCAGCACAATGGTCTCCACT 1111475 47 100.0 30 ............................................... GAATTAATTTGGTTTATGGTCAGGTAAAAG 1111552 47 100.0 30 ............................................... CTTCGGGAATACGAGAAGAAAGAAGGTGGT 1111629 47 100.0 30 ............................................... AACGGCTTTGAGTGCTTTAGATAGCACCTC 1111706 47 100.0 30 ............................................... TTGAAAACACCAAAACAATTACGGAAGTCG 1111783 47 100.0 30 ............................................... ACAAAGCTATGATTCTGCACGGATCACACA 1111860 47 100.0 30 ............................................... CGCTCAATCCTAAATATGGATCTGGTCACA 1111937 47 100.0 30 ............................................... TGGAGCGTAAAGCTGTAACGGCTGAACATT 1112014 47 100.0 30 ............................................... ACCTACAATGATCTTAAAGTATCTTTGGGT 1112091 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 40 47 99.5 30 GTTGTGAATTGCTTTCATTTTTGAGTATCTTTGAGATATAACACAAC # Left flank : GGACTAATAATATGAGCTGTCCAACCCTGTTGTTCCAAATGTTCTTTTGGAGATTTCAATTCACTTTCCTCAAATCCGTGTGTAGCAAGAATTGCAATTTTCTTTGACATAATAATATTTTTTGGTGTTATGATAGATATGTAAGAAAATATGATGCCTACTCCGATTATTGTGGTATTAAAAAATGTTAAAATTTATTTTAGAATTCTTCATTATTCCAAATATAATTAGCTGAACAAAAATTACGATAAGAAGTTTAAGAATAAAAGATTTTTTTGATGTTTTATGTCTAAAAATCATCATCGCTAACAATGCTCCCAAAGTACCTCCTAAAAAAGTCAAACTCAGAAGAAATAGTTCTGAAACTCTTCTTTTGCTTTTTTTGGCATACCATTTATCTACTCCGAAAACTATAAAAGTCAAAATATTTGACACCACCAGAAAGTAAATCATTCACAAAAATAGGAATATCTTTTATGAATATTCTTTGGGATGTGATA # Right flank : CCTCAAAATTTAACCCATTGTATTTCAGTGGGTTTTGTTGTTTTTTAGGATTTGAAATTTAGAATAATTCGAGTTGTTGGAAGGTGGGTGGCGGTTCTTCTTTATTTCTGGCAAAGAATATTTCTATGTCGGCAAATTGCTTATCGGTAATACACATGATGGCTACTTTTCCTGCCTTTGGAAGATTAAACTTCGTGCGCTTAATGTGCACCTCAGCATTTTCACGACTTGGGCAATGGCGAACATACATGGAAAATTGAAATAATGTAAAGCCATCATCAATTAGGCCTTTACGAAAGCGGTTGGCATCTTTCATATTGGCTTTGGTTTCCGTTGGTAAGTCGTATAATACTAAAACCCACATAATTCGGTAAGCGTTAAACCTTTCGGCATTCATTTTTCATGGTTTTGTTTTGCGGTATAATGGTTGTGCAGCCCGACATGAGCGGAAATCCTTTTTTGCATGCTCTCAAATACTATTTTATGTGAAATTGTCTGCA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCATTTTTGAGTATCTTTGAGATATAACACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.21%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCATTTTTGAGTATCTTTGAGATATAACACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.50,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //