Array 1 628663-631235 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP033898.1 Corynebacterium pseudopelargi strain 812CH chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 628663 28 100.0 33 ............................ CCCTCCCGTGCGCGCAGCGCTCGAATTGGCTAC 628724 28 100.0 33 ............................ CCAACGAGATCAACGAGGACATCACCAACGCCC 628785 28 100.0 33 ............................ CGAGAAACGTACCAAGGGAAAGAAGTCGCTGGT 628846 28 100.0 33 ............................ CGGGGTGCCTGCCTGTCGGCTTGCCGTTGGGGG 628907 28 100.0 33 ............................ CTTTATGGAGGTAGCCGCGCCGTCGTTGGATGA 628968 28 100.0 33 ............................ CTCCATCACAGAGTCCTCGGTGTACGACCACGC 629029 28 100.0 33 ............................ CGCTACGTTGATGCGCGTCCTGCGATGTGGATG 629090 28 100.0 33 ............................ CGACCAGGGGAAAGTGGGCATCTTATCGGCCGG 629151 28 100.0 33 ............................ CATCTATCAGTATGTCGCTGATTACATGGGCAA 629212 28 100.0 33 ............................ CCTTTGTGCCGGGCGGGAATGCGACTTCCTCAA 629273 28 100.0 33 ............................ GGAGTTGCTGCACGGCGCGAATGTCATGGCTCG 629334 28 100.0 33 ............................ CACCCACGGCTGCGTCTCCGTCTCCGACGTCCA 629395 28 100.0 33 ............................ GCTGGACAGCATGCCCGTGTCGGAAAACGCCAC 629456 28 100.0 33 ............................ CAAATCCGGCACAACGGCCCGTAATTACAGGGA 629517 28 100.0 33 ............................ TGGACGGTGACGGGGCCTGCTTCGATCATTTTG 629578 28 100.0 33 ............................ CGTCATGACCCAAATCAGTGCTGCTGGGCGTTT 629639 28 100.0 33 ............................ CTCGGCACCGCACAACAAGGCCGCTTTGACCTC 629700 28 100.0 33 ............................ CGCGCTGATGCAGGCCATTGTGCCTACGCAGAA 629761 28 100.0 33 ............................ CACATAGTCGTTTACCTCTTGCACCCCACATAC 629822 28 100.0 33 ............................ CGCATCAACCTTATCCAAGGTGGATTGCACATT 629883 28 100.0 33 ............................ TAGTCAGCGACAATGAATCGGGTGCCCTGGCGT 629944 28 100.0 33 ............................ CGAACAGCTTCGGCCTGCGCATGGGCACTTTGC 630005 28 100.0 33 ............................ CATGTCGCAGCGCTCTGGATCATCAGTCATTTC 630066 28 100.0 33 ............................ GCACCCGAAGCAAATTGAAGCCATGGCGCGGTG 630127 28 100.0 33 ............................ CTCTAGCACCCGAGGCAGTGCGTGCCATTGCCG 630188 28 100.0 33 ............................ CGACGCCGTGATCTCACCACGAAGCGCGCCCTC 630249 28 89.3 14 ....................T.G..C.. CGGGCGGTGCAAAT C [630273] Deletion [630291] 630292 28 100.0 33 ............................ CCCGCCCCGCCGGTAGCCCCCGGAATTCGCTTT 630353 28 100.0 33 ............................ GCTGCCAGGCTACCACGGCCTTGAAGGTGCAGC 630414 28 100.0 33 ............................ CAGTGGACCGGAAGGCCCAACTTGATCAATGCA 630475 28 96.4 33 .....T...................... GAATTTGCCACCCGCCGACCAATACATGCCGGA 630536 28 100.0 33 ............................ GTTAAGCGTTTGGCCGGTGGCCACGATATTGAC 630597 28 100.0 33 ............................ GCCTTACTCAAAGACACCACGCCCGCGCCGTGG 630658 28 100.0 33 ............................ CTGACCCAATGCCCATTCGACAGGGTCAGTATC A [630672] 630720 28 100.0 33 ............................ GCCTTGGTGGGCTCGGGCGGTAGCTCTACCGGG 630781 28 100.0 33 ............................ GGTTCCGCCGCCGAACATTTTGATGTCGTTGGA 630842 28 100.0 33 ............................ CTTGTCATTCAACTGCGACATGGTGGCCACATC 630903 28 100.0 33 ............................ TGGTGATGTGTGCGCAATGGTCGCGGCTGTGAA 630964 28 100.0 33 ............................ CACACCCGGCTCGTTCAAGATGCGTTCGACAGC 631025 28 100.0 33 ............................ CACCCCCGTGGTTGAGGAGGGGTGAGCCAATAA 631086 28 100.0 33 ............................ CAACGTCGCAGAGATTTGGGTCATGCAGCACTA 631147 28 85.7 33 .C..........TT.......G...... CGTCAGGGCATCGAAATTCCACCACCAAATGCA 631208 28 71.4 0 ............TTC.......CACA.A | ========== ====== ====== ====== ============================ ================================= ================== 43 28 98.7 33 GTGTTCCCCGCGAAGGCGGGGATGAGCC # Left flank : CCGGTTTGCGTGGCGACCTTGGGAAGTGGCTGACCGAGATTTCCCCAGGGGTTTTCGTCGGGAATCCCTCCGCGCGGATTCGCGACTTGCTCTGGCAACGCACCACTGAACTATGCAAGGACGGGCGTGCGCTGCTCATTTTCTCAACGAATAATGAGCAAGGAATGGAATTTCGAACCCACCGCCATGACTGGGAACCGGTCGACTTTGACGGGATAACACTCATGATGCGGCCCGATAAAAGCTCGAAACATGAAAAGAATCCGCGAAGAACAGGATGGTCCACTGCACGTAACCTACGAAGAAAACAGCGACGGTGAGGCATGGCCATTGGATGATGGGCAGTATGGGAGCCGAGCCCGATTCTCCCTCGCAAGTGTTAACTGAAGAGCTTAGTAAGAAGCCAGTAGACCGCACTCGAGTCCATTGGAGGCGTGATTAGTGAAACCAAGCTGTATGTAAAATGGGCCTGGCTCAACCTAACGTGCTGGTAGTGAAGT # Right flank : AACGTTCACGCACTGAGGGCCATTTTTGAGCACCCTGGTCGCCTGGGCTTCTAATGTTGCAGTTTTTCAGGCCGCGCAATTGCACTCAATTGGCTAACCTCGAACGGTTCTTGCACGTGGGTTGTGGATCCCGGTGGGGAAGGGGAGCGTCGAAAGGCGAAGGTCTATGCGAGCCTTTGCTCTAGTTCGAAGGCGCTGACTGAAGTGCATTTTGGAGACTTCACCGAAGGCATTGCCTAAACACCGCTGGATTTTGAGGTCGCATTAGCTTGCGACTTGAATTCTTTAAGGTCGCGTGAGGTAGCGCGGCAGTAGAGGGTCAGTGTTCTACGTCGCCTGATCGGTGTTGCCTTGCCAGCTTCAATTCGTGGTTGATGCTTTTTAAGGTGTTGTAGATTTTTGCTCCAAAAATGACCACTGCAGTGATTATTGCAAGGGGGATCGCGATTAAGACCGCGATTAACGCGAGTTCGACAATGCCCAGACTCATTTGGTTCCTC # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:-0.02, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGAAGGCGGGGATGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGAATGCGGGGATGAGCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.60,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-21] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //