Array 1 243593-246064 **** Predicted by CRISPRDetect 2.4 *** >NZ_MTCP01000002.1 Citrobacter braakii strain SCC4 scaffold2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 243593 29 100.0 32 ............................. ATTTCATTCAACCGGTCCAGCTCGAGCCGGTA 243654 29 100.0 32 ............................. CCGGCTGTGTCCATGATCGCCAAAAACGCAGA 243715 29 100.0 32 ............................. GATAATATTGCGCCACGACTCATAGCGGCTGT 243776 29 100.0 32 ............................. TAAAAGCCCTTCCCTTCAGTTCCTGCGTCAGT 243837 29 100.0 32 ............................. CTGTGACACGGACGGTATCGCCAACACCTCCG 243898 29 100.0 32 ............................. TTTTTCCAGTGCCCGGACTTATGCACAACCGA 243959 29 96.6 32 ............................T TACTAAAATTTCTTATTCCGTAGCGTCAGCCC 244020 29 100.0 32 ............................. GCGCTTAGATACAACAACCTGCCGTAATCCAT 244081 29 100.0 32 ............................. ATGATCGGCGGCAGCGATAACACTAGCGCGAA 244142 29 100.0 32 ............................. GTGTCAACCACGTCGCCGAGACCATCCAGTGC 244203 29 96.6 32 ............................C GCAGGGAATATAGCGGCCGGTGAAACTCTCTC 244264 29 100.0 32 ............................. CCAAATGCAAACGGCTCCTTCTTCCGTGTCGT 244325 29 100.0 32 ............................. CCGCTGGGCTGGCGACCGTCGTGGTTTGCAGA 244386 29 100.0 32 ............................. AGAACGGTGGCGGGTACTGGCTGGGCCGGATT 244447 29 100.0 32 ............................. TCTTTGGCCGCATAGGCTGCATCTTCCATTAT 244508 29 100.0 32 ............................. CCACTCTGGCGCGTATTCGTGCCGGAAAATTC 244569 29 100.0 32 ............................. GTATCATACAATTTCTTTCATAGACCCGGCAC 244630 29 100.0 32 ............................. CAGGAACGCAGATCAGGCAACAAATCGCGCGT 244691 29 100.0 32 ............................. ACAAGCTGCTGTGCCTGTTTAACCAGGTTAAC 244752 29 100.0 32 ............................. TCCGGACAGGGCAACGTGATTACCATTCCGTG 244813 29 100.0 32 ............................. GCTTCAGCATTAGCGGACCGCGGGGAGGATTC 244874 29 100.0 33 ............................. TCACGCGCGGTCACGTTGATGTCACGACAGAAG 244936 29 100.0 32 ............................. GTACGTGATCGACCAGGACGCAGACGGGAACC 244997 29 100.0 32 ............................. AATGATGGTGCGCAGCTCATGCAGCCTGGCTA 245058 29 100.0 33 ............................. CCAAATCTGTCACGAAATCATATTTTCCCCACA 245120 29 100.0 32 ............................. CATGTCGAGAAATGCTTGCAGATTACTGCTTA 245181 29 100.0 32 ............................. CGTCATCCGTCTTTACCCGCGCCTTGCGCAGG 245242 29 100.0 32 ............................. CGATCGTAACGGTTAGACAGCTAATTTGTATG 245303 29 100.0 32 ............................. TCACGATTGAATATTAAATAATCATCAGCTGA 245364 29 100.0 32 ............................. AACGAGGGGGCAATTGAGCCGGACGTTGACGG 245425 29 100.0 32 ............................. ATATTGAGGACTCGATATCGATTGCGATGATG 245486 29 100.0 32 ............................. TTGCCCGACCAGGCTTTCACTGACGTGCTCAA 245547 29 100.0 32 ............................. GCATACGGCAGGATTTACGAAATTACTATCAA 245608 29 100.0 32 ............................. TCCGCGACCGGTTCCCCCTCCCATATATTCGG 245669 29 100.0 33 ............................. GGTATTCTTTGTCTGAGTAACTGCCTTTTCTAA 245731 29 100.0 32 ............................. GTGCGCGGCCCCATTTAGCAGGGCGTTTTGCG 245792 29 100.0 32 ............................. CCAGGCTCCGCTCGGCAAGGCGTACAACTGGA 245853 29 100.0 32 ............................. GATATGATGTCAGGAAGCGGCGGCGCGTCTGG 245914 29 100.0 32 ............................. CGCATAGCCGAGCTGGAGGCGCGGACGGTGAA 245975 29 100.0 32 ............................. TCTCTGGCCGCGTTTAAATACTCAGTCGAGAA 246036 29 89.7 0 ............T............T..A | ========== ====== ====== ====== ============================= ================================= ================== 41 29 99.6 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGACGCTGGCGAAATAGACCCTCCGCAGCCTGCGCCAGATATGCTGCCGCCTGCAATACCGGAACCGGAATTGTTTGGAGATGGTGGTCATAGGGGGCGTGGTGGATGAGTATGGTTGTCGTTGTAACGGAAAACGTTCCGCCGCGTCTGCGAGGGCGTCTCGCCGTCTGGCTGCTGGAAATTCGTGCGGGTGTTTACGTTGGTGATACCTCTAAGCGAATTCGGGAAATGATTTGGCACCAAATCATACAGTTGGGCGGAGCGGGAAACGTTGTGATGGCCTGGGCGACAAACACGGAGTCAGGTTTTGAGTTTCAAACCTGGGGAGAAAATCGCCGTATTCCGGTAGATTTGGATGGACTTAGACTAGTGTCTTTTCTTCCTTTTGATAATCAATAGGTTGAGTGTTCTTTAATAAAACGGAATTGTTGTTCCCAAGTTGGTAGATTGTTACTTGATGAAAATTGCAATAGAAAACAGTTATATATATTTAGT # Right flank : ACTTTGAAAGCAGAAATATTATGGGGCTGGATGGGTTACGAGGATTTACCCGCCTTTGCCAGTTCTTTCACCAGCGGGAGCATAATGCGTACCACGTCGCGGCTACGGTGCTCTATCCTGCCCGGTAAGGCTTTATCGATATGCTGCTGGTTATCCAGTCGCACATCGTGCCAGCTGTTGCCTGCCGGGAACGAGGCGCTTTTGGCGCGCTGTTGATAGCCATCTTTCTTGCCCAGACTCCAGTTGGTTGCTTCAACGGAGAGCACGGCAATGCCCGCGTTGTCGAAGACCTCTGCATCGTTACAACATCCAGTACCTTTCGGATAGTTTTTGTTCAGTCCCGGATTGGTGCTGGCTACGATACCGCGGCTGTGCGCGATGGCCAGCGCCCGGTCACGCGTCAATTTTCGCACCGCTTCCGGGGTTTTCTTACCGCTATTGAAATAGAGCTTATCGCCGACGATCAGGTTATCGAGGTTGATAACCAGCAGCGTATTTTT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //