Array 1 13824-10133 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABGBO010000003.1 Pelistega europaea strain LMG10982 Scaffold3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ======================================= ================== 13823 31 100.0 36 ............................... CCAGCTTGATCATCATTAAAGACATCTACAATCTCA 13756 31 100.0 34 ............................... CGGCTTTGTCTCCCCATTTTTCTTTGGCCACGGC 13691 31 100.0 34 ............................... CCCTCCACCTGCAGCTCCACCATACCCAATGATG 13626 31 100.0 36 ............................... CTCTGGGTGAGTGTCTTTGGTCGCACGGTCGAGCAT 13559 31 100.0 35 ............................... CTAGTACCTTGAGTAAATCCAGTCGGTTGTGAATG 13493 31 100.0 38 ............................... CCGTCCCGTGATGTACTGTACTTTGCGCATCTGGGAAA 13424 31 100.0 35 ............................... CTAAGCGAAAGTGATTGGAAGCAGTTTGCGAAACG 13358 31 100.0 36 ............................... CAAAATAATCACGCCAAAGATTTCACCACCGAACAA 13291 31 100.0 35 ............................... CCTGTTTCTGAGCATTTACAGCTGGTGCAGCAGGA 13225 31 100.0 36 ............................... CATCGTTATGGGTACGAGAGTTATTTGCGTAAGGGA 13158 31 100.0 35 ............................... CCTCAATCTCAAATCTGCAGATTATTGCTGGCATT 13092 31 100.0 37 ............................... CAAGTTGACCTCATCTGTGATGGTTAAATCTTACCTG 13024 31 100.0 36 ............................... CATCAATTAAGATGCGATGAAGAAATTGCGGACTAT 12957 31 100.0 36 ............................... CACGGTTTTAGCCGCAGCGTTCAACGCTTCAATCTC 12890 31 100.0 36 ............................... CACATCAAGTCGAGCTGGAGCAATCTCTTTTACCTC 12823 31 80.6 35 ...G.....CA.G......C....G...... CATCCAGTTTTTTATAAATATCGCTGTCCTTACCG 12757 31 80.6 35 ...G.....CA.G......C....G...... CTACCCATGCGGTTGGTATCACTTGATACACATCG 12691 31 80.6 39 ...G.....CA.G......C....G...... CTGCCAGCTCTTGGGGGATTAAAACTTATTCGTGAGAGT 12621 31 80.6 39 ...G.....CA.G......C....G...... CTGCCAGCTCTTGGGGGATTAAAACTTATTCGTGAGAGT 12551 31 80.6 35 ...G.....CA.G......C....G...... CTCCGTATAAAAATTTTGGCAGAGTGTTATTCTCC 12485 31 80.6 35 ...G.....CA.G......C....G...... CATGTTTAGCTAACCAGTCATAAACAGCATTGCGA 12419 31 80.6 37 ...G.....CA.G......C....G...... CAAAAAGCCAAGCGAGGGCTTGAAAACTGCATTGAGC 12351 31 93.5 35 ..........A.............G...... CTCTTTATAAGCTCTCTGCCACTCAAACCATATCA 12285 31 93.5 36 ..........A.............G...... CATTTATTCATAAGTTGGGAAATAAGGGAAAATGGG 12218 31 93.5 36 ..........A.............G...... CCGGTTAATCAAATAGTGGCATACTTTGACAAACAA 12151 31 93.5 34 ..........A.............G...... CTTCACCTACTCCTACAAATTGATAAGCAGGTCT 12086 31 96.8 35 ..........A.................... CTTTGTTCAAGTTTATGCACACATCCAAGTGTGTA 12020 31 96.8 35 ..........A.................... TATTTTTAACCTCGTAATAAAACTTTAACCATACC 11954 31 100.0 34 ............................... TGTCTGCTGCCATAATTACCTCAATCGTTTTAGG 11889 31 100.0 36 ............................... TTTCAACTTGCGTTTTCACGACCTGCGACACGAGGC 11822 31 100.0 35 ............................... TGTTTATTGAAGCGGCATTAGGCAACATTAAACAG 11756 31 100.0 36 ............................... TTTGCCTCCTACACTAGAGCAGGTTCTACCTCTGTC 11689 31 100.0 35 ............................... TTACTTATATATAGGCAAGGCAGGAAAAAAGTAAG 11623 31 100.0 37 ............................... TTACCAATACGTTTAAAGCAAACATGGATAAAAACGT 11555 31 100.0 38 ............................... TTTAGATATAACCTTATTGACTGTTTAGCTACTTGGTA 11486 31 100.0 35 ............................... TAGCTCTAATACGAGCTGCATAATGTCGGTTCCCA 11420 31 100.0 35 ............................... TCCACTCGAAATAATTAATAATCATGCTCCCTCTG 11354 31 100.0 36 ............................... TTGCATCCCTTTACTGTTAAGCGCCATCGCTGTTTT 11287 31 100.0 36 ............................... TTTTGTTTGAATTTGCACGTGTAAACGGGCTTGTGA 11220 31 100.0 35 ............................... TAGTTATCAGTAGAAGAAAAAGCAGGTCAAGCAGA 11154 31 100.0 36 ............................... TGATTAAAACGTGGGTTTGTCCACAAAACCGAAGAA 11087 31 100.0 37 ............................... TTTTGAAAACCACTTCTTTGGTAATGTACCGTGCCTC 11019 31 100.0 36 ............................... TCAAGGTATACCACCGATGGAACTTATTAATTATCT 10952 31 100.0 34 ............................... TACTGGACAACGACGCATAAAATCAAGCAGGAAG 10887 31 100.0 35 ............................... TTGCGATTTTTTAGCTATGCATAATAAAATCAAGC 10821 31 100.0 35 ............................... TTCGTACGTTCTGCGTGCCATGATGCAAGCGTGTT 10755 31 100.0 36 ............................... CCGAGTTTACACGATTGATTTTGAACCTGAAATATT 10688 31 100.0 34 ............................... CTACTGGTGATACTGATGATGGTTTAATCGACAT 10623 31 100.0 35 ............................... CTTCATCTAATGGATCTAATTCCAGCAAGCTCTGC 10557 31 100.0 35 ............................... TTCTTTGGTCTCTTTTACCGAAAAGAGTATGTACT 10491 31 100.0 35 ............................... TACTTATTCTACAAGGAGCATATCACAGCAAAGTC 10425 31 100.0 35 ............................... TTAATAAGGCTAATACTGACCTAGACAATATTACC 10359 31 100.0 35 ............................... TTCAGGCGTTGGCGCAGCAATCGGTGGCTTTTTCG 10293 31 96.8 34 ........................G...... CATCAATTCCGAGATTGGTTCTTAGCTAATCAGA 10228 31 93.5 34 ..........A.............G...... CCTGGTACGATTGTAACTGCTAAGTGGTTGAATG 10163 31 80.6 0 ...G......A.G......C....GC..... | ========== ====== ====== ====== =============================== ======================================= ================== 56 31 96.5 36 GTCACCCTCTGCACGAGGGTGTGAATTGAAA # Left flank : ACCGTTTTTGATGAAATAGGAGAAAGGATGTTAGTGCTGATTACCTATGATGTTTCGTTTGATGATCCAGCAGGAGCTAGGAGATTACGAAGAATTGCTAAGCATTGTTTAGATTATGGAGTGCGGGTTCAGTATTCTGTTTTTGAATGTGATGTGACGCCAGATCAATGGGTTATATTAAAAAATAAATTATTAGATGAATATCAAGAGGAGACAGATAGCTTGCGATTTTATATGCTGGGCGCTAAAGGTAGGCAGAAAATTGAGCATTATGGTGCTAAGCGTGCTATTGATATTTTTAAGGATGAGCTAATTATTTGATGCCCGCTAATTTGTAGTAAACATATGATTAGGATAAGCTTAGCGGGCTTTGATTTTTAAGTATAAATGCCGAGAAAGTAGTTTTTCTTGGATGGTTCTTTAAAAAGATGTAATGATTTCTTGAAATTAGCGGGAATGCTAATTTTAAGGTAATATATATGAGCCATCTAGCGATGGCG # Right flank : ACTAGTATTATTGCAATAACCATAGGAGGTGGATCGTTAGTCATGGGAGTTGGTGGTAAAGCAGCATATGCAGGAGCTAACCTTGCTTCAGCTGGAACGGTAATGGGTCTGCAAACGGCAGGTGCAGAATATAAGCAATCTCGCGATAGTGGCTTAACCCCGATTCAGTCTATTCCTTATGCTGCATCACAAGCTGCTATTGAGGTAGCCACGGAAAGTATTCCAGCCATGGTATTTTTTAAAAACCTTAAGCAGGGCGCACCTTTTTATCAGACTGTTTTAAATTCTCTTGCTGCAGAAATCCCTAGCGAACAAGTGGCGACCATTTTGCAAGACGCAAACGAATGGGCGGTATTAAACCCTGAAAAAACATTTAAAGATTATCTAAGTGAACGACCTGACAGGGCTGTATCTACCGCTATCTCGACAATTACCTCTACTTTAATATTAGGTTCTGCAGGTCATACTGTGCAGCGTATCGCAGATAGAAAAGCGAAGAA # Questionable array : NO Score: 6.08 # Score Detail : 1:0, 2:0, 3:3, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACCCTCTGCACGAGGGTGTGAATTGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.10,-4.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA //