Array 1 56805-53802 **** Predicted by CRISPRDetect 2.4 *** >NZ_RRCQ01000014.1 Xanthomonas vasicola pv. musacearum strain BCC282 scf_22297_14, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ====================================== ================== 56804 31 100.0 34 ............................... GTCTATGACGTCACGACCTGGATTTTACGCAACG 56739 31 100.0 36 ............................... GTCAGGTAAAGGGTCTGCTCTGCCTTTGCATACAGG 56672 31 100.0 35 ............................... AGGCATACACAGGAAACTAGGGATAAAATAAGTGC 56606 31 100.0 35 ............................... TTCACCTAGGCTCCTACCCCACCGCTGACCTGGCC 56540 31 100.0 34 ............................... CAGTTCTACGCAGAACACGAAACAATGACGACAT 56475 31 100.0 35 ............................... CTTTAGCAGGCGTTCACCACTCTCTTGATCATATG 56409 31 100.0 33 ............................... CTGGTGTGTCTGTCTACCTTGGTAAGAGTTGGC 56345 31 100.0 37 ............................... CAAGTCCACCTTGTCATAACCGTACCGATTCGCACCG 56277 31 100.0 36 ............................... CTTACTCAGCTGCATGGCTAGTGCACTTCGCTTATT 56210 31 100.0 36 ............................... CTGAAGCCCTGCCAGGTTACGTACCTTCCGAAGGGA 56143 31 100.0 35 ............................... CAGTCCTGAATAATGTCCTCATGCCCAATGAACTG 56077 31 100.0 37 ............................... CCTTGCGTTCGCCTGTCTTTGGGTCTCCCGTCCAGTG 56009 31 100.0 35 ............................... AGATTTTGGCGGTGCATCTGTTGTACTCCCTCTGC 55943 31 100.0 34 ............................... TGGGCATTGGACAACCATCAGCCCCTATGCAAGC 55878 31 100.0 35 ............................... CCACTGTGGCAGGGCCTTGACATAACCGGGGAAGC 55812 31 100.0 36 ............................... AGTACAGGTCACTGCATAGTGCCTACTGCAGTACGG 55745 31 100.0 35 ............................... CAATATGGAGAGTTCCTGATGGACTACCTAGTTGA 55679 31 100.0 34 ............................... TCGCCAGAGAGCCTTACCAGCGAACTTGCCGTGG 55614 31 100.0 35 ............................... AAGGTAAGCACAATGTGGTTGAGCAAGATCTGTCC 55548 31 100.0 34 ............................... TTAGCACCACCAGCAAAGCGGGCTAGCTGATACT 55483 31 100.0 36 ............................... AGGCACTGCACTGTCCCAGCCATTGGGGCCCTTTGA 55416 31 100.0 35 ............................... TGGCGGATTAGCTCCCCCTTAGCTGTATCCACGTA 55350 31 100.0 32 ............................... ACAAAATAAGGAGGCCCTATGGCCGAGCAAAA 55287 31 100.0 35 ............................... TTTGTCGGCTTTTTCAGCAAGGGCAAGCAGGAGAC 55221 31 100.0 34 ............................... GAGCTATGCGTGTTCGAACCAGTGCCAGTACACA 55156 31 100.0 36 ............................... AGCAATGTGGATTCGCAGGCTGGCGGCTCGTTACAG 55089 31 100.0 34 ............................... TGGGAGACTGTCAGACAATAAGCTGGTGCTGACG 55024 31 100.0 35 ............................... TGCAGGATGCACAGAACCACCAAGCATGGATGCAG 54958 31 100.0 35 ............................... CTAAGTGATAGCGAAGAATGCAGGCGGCTGACCTA 54892 31 100.0 37 ............................... GTGTACACATCTGCCGCCCCTAGGTCCGCAGAGGCAA 54824 31 100.0 35 ............................... AAGACTTGGTACTTTGACGAGAGTGCAGAGGGGTG 54758 31 100.0 35 ............................... AAGACTTGGTACTTTGACGAGAGTGCAGAGGGGTG 54692 31 100.0 35 ............................... ACTCTTTTGTACCAGCAGCGCATCATTCTGCGCCA 54626 31 100.0 34 ............................... CTGTGCTGCATGGCGCACGCGAGATTGCAGAGTT 54561 31 100.0 35 ............................... TTTGTCAAACATGGTAGCGGCCTCCGTTGGTGTAG 54495 31 100.0 33 ............................... ACCTTTGCAACCCTTACCAGCATACAGGCCGAT 54431 31 100.0 35 ............................... AGGCGCATCTCGAAGATCTTCACAGTTAATTTCCT 54365 31 100.0 36 ............................... ATCCCCATCCTCGTTTTGTGTGGCCGGTGCGGGCCG 54298 31 96.8 38 .....................C......... GTCTCGCTGGCGACGTTCTGGCTGCTGCTGCCCACCGG 54229 31 100.0 35 ............................... TCCTCCGGAGTCATGGTTGCATCCCCGGCTTGGCG 54163 31 100.0 35 ............................... GTTTCCAAGGTCGCAGCCAACGTCACCCGCATCAT 54097 31 100.0 37 ............................... GTTGATCAATATGGCTCGGCTGCGGAAATAGTGGATG 54029 31 100.0 35 ............................... AGGCACGAAGGCGCCCGGCGTAGCCTCGCGCTCAA 53963 31 100.0 35 ............................... TGGTCTGCGTACCCGAACAAGAAGGGCCGGCAAGA 53897 31 93.5 34 ..........GC................... AACGGCCCGTTGATGATTCGGCACGTGGCGCAGG 53832 31 90.3 0 .............A.A.....A......... | ========== ====== ====== ====== =============================== ====================================== ================== 46 31 99.6 35 GTCGCGCCCTCACGGGCGCGTGGATTGAAAC # Left flank : AAATGACGCGACTCAAGCCCCATGATGATTCTTGTCAGCTACGACGTCAGCACCAGTTCTCCCGGCGGCGAGAAGCGCCTGCGCAAGGTCGCCAAAGCCTGCCGTGACCGTGGCCAGCGCGTGCAATTCTCGGTCTTCGAGATCGAAGTCGAGCCTGCCCAATGGACTGAATTACGGCAGCAGCTATGCGACCTGATCGACCCGGCCCTGGACAGCCTGCGGTTCTATCACCTTGGCGCGAAATGGGAGACCCGCGTGGAGCACATCGGCGCCAAGCCCAGCCTGAACCTCAAAGGCCCACTGATTTTTTGACGCGAACCCCAAGCGCCCCATAAAAACCGGGCAGGTTCGCAGTCTCCTCAAGCAACTGATTTGCAACAAAAAAATAAATAGACAGCGGATTCACGGGGCCGCATGACGACTTCTCGACTGCTTTTTTCAGCAAGTCCGCGCAATTGCCCGTGTTTTAGCAACGATGGCAAACACTTATGCTAAGGGGG # Right flank : ACTTTAGACTCGCCCGCCAGCCGGACGCTGACCAGGTGCAGGTTGGAGACGCTTGAGGCCTGCATGTAGCACGGATCAATACGCACGCAGATCAAAAATTGGGCTCCGTCCATCAACGCTTGAGCACCATTATTTGACGATGATCGTCTGAGGCGTGCCTGCAAGCTTCCCGTCCACCATCACCTGCGCGGTGTAGGTGCCGGCCGGCCAGCCATCGGGCTTGCTGAAGCTCAGGTTGGTGGTTTCGGCACCGGTGGTGTTCAACGTCGCGTTCTGTTCGCCGGCCACCTGGCCATCCTGGTAGGCCAGCTTCGCCGACAGGGCCACGTTGCTCGCGCTGCCGTCGGTCTTGACCGAGACGATGATGGTGTCTTTGCTGCCGACACTGGTGGCCGGCGTCACCGTCTTGTCGGCTGCGGCCTGGGTGCCGACGGCCACGCTGGAGACCGTCACTGCACTACCCGTCGCAGCGCCGCCATCGGTGCTGGCCGCTCCGGTGG # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCTCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCTCACGGGCGCGTGGATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.80,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //