Array 1 1-295 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_SZOD01001692.1 Bacillus mycoides strain I186 NODE_4203_length_268_cov_13.731343, whole genome shotgun sequence		Array_Orientation: Unconfirmed

  Position	Repeat	   %id	Spacer	Repeat_Sequence          	Spacer_Sequence                               	Insertion/Deletion
==========	======	======	======	=========================	==============================================	==================
         1	    25	 100.0	    41	.........................	GCGACAGATGGCGTCGATGCTTTAACAAAACAAACTGATAT     	
        67	    25	 100.0	    46	.........................	NNNNNNNNNNGTTGTCTCACTGATTTCTCTAACTCCTTTGTTACAT	
       138	    25	 100.0	    42	.........................	GCGACAGCGTTATGGATGCGAAGAGATTGTAACAGAAAAAAT    	
       205	    25	 100.0	    41	.........................	GCGACCGTGTAGCCATACTAGTTGATGCGGTGGCTTGGAAT     	
       271	    25	 100.0	     0	.........................	|                                             	
==========	======	======	======	=========================	==============================================	==================
         5	    25	 100.0	    43	TTCAATCCACGCACCTACAAGAGGT	                                              	       

# Left flank :   |
# Right flank :  GCG

# Questionable array : NO	 Score: 3.06
# 	Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     TTCAATCCACGCACCTACAAGAGGT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:52.00%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         NA [0,0   Confidence: NA] 

# Array family : NA
//


Array 1 1-224 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_SZOD01000089.1 Bacillus mycoides strain I186 NODE_92_length_3382_cov_13.058249, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                   	Insertion/Deletion
==========	======	======	======	================================	==================================	==================
         1	    28	  87.5	    33	----............................	ATTCCCCTTTCTATTCAAATAACGCTTTGGTTC 	
        62	    32	  96.9	    34	...................A............	AGCGAAGCACAAACAGCAATGTCAGAACGTTTTA	
       128	    32	 100.0	    33	................................	GGTATTCGTGTACAAGACGGATCAAAGGGTGCA 	
       193	    32	  96.9	     0	...............A................	|                                 	
==========	======	======	======	================================	==================================	==================
         4	    32	  95.3	    34	GTCGCACCTCTTGTAGGTGCGTGGATTGAAAT	                                  	       

# Left flank :   |
# Right flank :  TATCACAAGATTGAGGAAGAAGGGGTTTTTAAGGTAATGCTTTAACTTCAAAACAGTCTTCAGCTCATTAGATACTCAAATCGGCGCATCTCTACCTGCAGTATCTAACACACATGTTAAAACTATAAAATGGAGGGAGATAGAATGACCCACATTGCTCATATCCGCGAAAAAGACAAGCAAGTTCAAACTGTTGAGGAGCATTTATTAGGGGTAAAAGAACTAGCCGAAACCTATGGAGAAAAAATTGGTATAAAACATTTAGCTGGTTTAGCGGGCATGCTCCATGATATAGGTAAATATACCATTGAGTTTAAAGAGTATATATTGGAAGCAGTAAATAACCCTGATTCTCCATCTAAAAGAGGAAGTGTTGATCATTCAACTGCAGGTGGAAAATTGTTATATCAATTATTCCATACTGAAGATATCATTCCTTACAAAGGGATACTATCTGAAATAGTAGGAAATGCTATTATTTCTCACCATGGATACCTTCA

# Questionable array : NO	 Score: 8.31
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:0.69,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCACCTCTTGTAGGTGCGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:53.57%AT]
# 	Reference repeat match prediction:         F [matched GTCGCACCTCATATAGGTGCGTGGATTGAAAT with 93% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [1-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [9.41,0   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
//