Array 1 2733123-2732764 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP013686.1 Clostridium botulinum strain F1425 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 2733122 30 100.0 36 .............................. TGATGAAAAATAATTATGCACCTGGATATTTAAGAA 2733056 30 100.0 35 .............................. AAATTTATGGATCTAATACTCATAAAGATGATTTT 2732991 30 100.0 37 .............................. TTTATTAGTGCCATTCCCGCTGGAGAGTATTGTGTCC 2732924 30 100.0 36 .............................. AATGTTAAAACAGTTACACCAGCTACAAGACCAAAG 2732858 30 86.7 35 G.....T.G.......G............. TGGCTTCTTATTGCCTGTTGTATCTTTTCTGGTAG 2732793 30 80.0 0 .....G..C...G..AG............C | ========== ====== ====== ====== ============================== ===================================== ================== 6 30 94.5 36 ATTGAACATTAACATGAGATGTATTTAAAT # Left flank : AAAATCACTTGGAAAGCTTTCTATAAAACCTTGTAAAATCAATGGGTATATGATATTCTTAGAAATAAGGAATGGCTATTTTACTATGGTCGAACAGTAACATAAGATGTATTTAAATAGCATATAATCAATTTTCTTACCCTTTTCAGTATGTCGAACAGTAACATAAGATGTATTTAAATTAATAATTTCATTCCTGGATCTAATTTTTGTATTAGTTGAACAGTAACATAAGATGTATTTAAGCAGAGAACTTAAATTTGTGATTTGGTGTGAGTTGCTTACTTCTTGGAGGAGAGGAGTAGGAGTTTCATTAATTGAATTTTTCCAGGTGCAATAAATTTGCGAACCTATTCTAGACGTTGATATATAAGGCTTAGAATAGGTTTTTATCATGTGCTTATGAAAAAACAAAATCACTTGGAAAACTTTTTCTAGAACCTTGTAAAATCAATGGCTATATGCTATTCTTAAAAATAAGGAATGGCTATTTTACTATG # Right flank : AAATTAAAATCCATGATTTTTTCTCTTTAAAGTTGTTTAGTTTTTAGAGCAGCGTTGATAATATATCAATTTTTAAGAGAAGTCATTTTAGACTTCTCTTAAGTGGTATTTTATTTAATTGTATAAAGTACATTAGTTAAAACTTATTTTTTCAAATGTACCCTTTTCTATGTGTAATTCAATATCAATATCTGCTTTTTTATAACCTACTAATTTTATACGATTATTACCTTTTTTTATTGGTAAAGTTAATGATGTTGTTCCTTTCATAGTGGCTTTATCTGTATTTTCTACAAGATTAACAACCGTATTGTCAGGAGATATTAAAACGATTTTTGCCTTTCCACTTTTTACTGATAAGATATATGGAACTTTCAAATCAAAATCAGAACTACTTTCATATGTCCAAATAGTTCCACTTCCACTTAATTTCAACTTCCCTTTATATATTCCAGATTCTATGATTTCATCACTTTTATCTAATCCAAAAGTATCATATA # Questionable array : NO Score: 5.98 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 2 2733535-2733378 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP013686.1 Clostridium botulinum strain F1425 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ===================================== ================== 2733534 28 100.0 36 ............................ ATAGCATATAATCAATTTTCTTACCCTTTTCAGTAT 2733470 28 100.0 37 ............................ ATTAATAATTTCATTCCTGGATCTAATTTTTGTATTA 2733405 28 96.4 0 ..T......................... | ========== ====== ====== ====== ============================ ===================================== ================== 3 28 98.8 37 GTCGAACAGTAACATAAGATGTATTTAA # Left flank : AAATAAATTTGAAATTATTGTTAATGAAGATGAAGTAAGCCAAAGAAAAGCAACTATAGCTTTAGGAATGGGTTTAGGTGAGAAAGGAAGCAGTTTAGGTGCAGGATTTTGTATTTACAGATAAACTTTAAATAGGCGTTTATTTATTATTGTTGAACCTTAATATGGGATGTATTTAAATTTTTCTTAACTTCCTTAAATGCTTACATATTCTTTGATTGAATATTAACATAGGATGTATTTAAGCAGAGAACCCAAATCTATGATTTGGCGTGAATCGCTTACTCCTTCGAGAAGAGGAGAAGGAGTTTTATAAATTGAATTTTTTCAGGCGTAACAAATTTCAGAACCTATTCTAGTCATTGATATATAAGGGTTAGGATAGGTTCTTGTTGAGAATTTTTCGAAAAGTAAAATCACTTGGAAAGCTTTCTATAAAACCTTGTAAAATCAATGGGTATATGATATTCTTAGAAATAAGGAATGGCTATTTTACTATG # Right flank : GCAGAGAACTTAAATTTGTGATTTGGTGTGAGTTGCTTACTTCTTGGAGGAGAGGAGTAGGAGTTTCATTAATTGAATTTTTCCAGGTGCAATAAATTTGCGAACCTATTCTAGACGTTGATATATAAGGCTTAGAATAGGTTTTTATCATGTGCTTATGAAAAAACAAAATCACTTGGAAAACTTTTTCTAGAACCTTGTAAAATCAATGGCTATATGCTATTCTTAAAAATAAGGAATGGCTATTTTACTATGATTGAACATTAACATGAGATGTATTTAAATTGATGAAAAATAATTATGCACCTGGATATTTAAGAAATTGAACATTAACATGAGATGTATTTAAATAAATTTATGGATCTAATACTCATAAAGATGATTTTATTGAACATTAACATGAGATGTATTTAAATTTTATTAGTGCCATTCCCGCTGGAGAGTATTGTGTCCATTGAACATTAACATGAGATGTATTTAAATAATGTTAAAACAGTTAC # Questionable array : NO Score: 5.30 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAACAGTAACATAAGATGTATTTAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.43%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //