Array 1 129-281 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAXYD010000140.1 Streptomyces sp. McG5 NODE_140_length_13735_cov_55.7147, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ========================================= ================== 129 24 100.0 41 ........................ TCTTGAACGGACGAGTCCGATCCGGACCTCGGCCCACAACC 194 24 100.0 40 ........................ TCCTGAACCGTCAGGTTCCCCCGGGCCCAAGCCCAAAGAT 258 24 100.0 0 ........................ | ========== ====== ====== ====== ======================== ========================================= ================== 3 24 100.0 41 CAGCCCGGCCGGCGCTTGAGGCCA # Left flank : GGAGATGTGTATATGAGACAGGGTCCCACCGACAGCAGCGCACATCCCCCCATTGTCCGCAGCCCCCGCCCCACCGCGAAAAACAGCGGGCACGACCGCCGAGAGGCAACTGGCCGACCGCCGAAAAAC # Right flank : ACCCCACCGCACCCCCGCCGGGGAGGGAAGACTCACTCCCCGGCCATCCTCCGCAACATCCCCCGGAGGACCTCCCGCTCCTCCCGGGAAAACCCGGCAAGCGGCTCCCGAGCAAAATCAAGGGAGTCCCGCAGCACCCGCGCGACCTCACGCCCCTCCGCGGTCAGAGCGGCCACCTTGATCCGCCGGTCCCCGGGATCGGCCTGCCGCTCGACCAGCCCCCGCAGGGCGAGCCGGTCCACGATCCCGGTGACGTTCGACGGCTCGCACTTGAGCCGCCGGGCGATCTGCCGCATGGGCATCGCCTCAAGGGACAGCAGACCCAGTACACGGGCCTGCGCGCCGGTGAGCGCCTGCTCGGCGGCGGCCCGGTCGTACTCCTCGTGGTACCGCGCCACGACAGCGCCGATCAGCTCGACGACTTCGAGGGTCAAGGGGTCCGTGCGGGTGGCCATGGGTCCCAGGATAGCCGGTTGCTTGACAACATGAAATATTCAGAC # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAGCCCGGCCGGCGCTTGAGGCCA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.10,-1.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [33.3-26.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 1 1008-2072 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAXYD010000013.1 Streptomyces sp. McG5 NODE_13_length_30446_cov_62.6761, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1008 28 100.0 33 ............................ CAGGGCCGGGACGATGCCGCACGCCATGACGAC 1069 28 100.0 33 ............................ GGCGGCCCGTAGGGCCCGTGACCGAGGTTGACT 1130 28 100.0 33 ............................ GTTCTATCGCCGCATGCGCCTGGCCGCAGTCGG 1191 28 100.0 33 ............................ CCTCTGACCTGCGATGATGCCGCGCGAATGGGG 1252 28 100.0 33 ............................ GGTTCAGGAGTGGGCCGGGTGGCGTACCCGCAA 1313 28 100.0 33 ............................ CAGCGAGCGGGAGGTGTCGGCCCTGGCCCAGCC 1374 28 100.0 33 ............................ TGACGCCGAGCAGGCAGGCCACATCGTCCGGGT 1435 28 100.0 33 ............................ GTCGTACCGCGACGGGCACTTCGGCACGGCGAC 1496 28 100.0 33 ............................ GGACCACCCCAACGACTGCCGCCAGCTCATCAC 1557 28 100.0 33 ............................ GACAGGGCGCCGGATCAGCCGGTAGGCCAACCT 1618 28 100.0 33 ............................ CCACCAGGTTGCTCACGCGCTGTGTGCGCGGAG 1679 28 100.0 33 ............................ CGTCACCGTCGCCACCATCCGCACCTGGTGCCG 1740 28 100.0 33 ............................ GCCGACGGGGGCGTCCTCGCGGGTGCGCACGGG 1801 28 100.0 33 ............................ CAGGACCCGGTCGTACAGCGGCGCGATCGGCGC 1862 28 100.0 33 ............................ CGGATACGGCGACACCCGCACCCACAGCGCCTC 1923 28 100.0 33 ............................ GGGGTTCGATGGTCTGAAGAAGCGCCTCACCGG 1984 28 96.4 33 ........................T... GTACCTCCACCCCGAGGACCCGGACCTGCCGAC 2045 28 89.3 0 ..........T.........A...T... | ========== ====== ====== ====== ============================ ================================= ================== 18 28 99.2 33 GTCGGCCCCGCACCCGCGGGGATGCTCC # Left flank : CTGGAATGCAGGCGTTGCCTTACCAAGATCGTGGACAGCGCATAGCCACGCAAACAACCTGCGGCCCTGACCCGGACCACCGGACACCTCGTCCAGCAGGCCCCGTGTCGAAGGGGCAAGGAAGCTGTCCCACAGCCGCTCAGCCACAGCCGCCGTATCAAGCAGGTGCGACAGAAGAAGATTCGTCTGCCCGCCGGCACGCTCCGCCGACTTCCCCCACAAAACCCCTAACGGACCTTCCACCGACTCCAGCGGCACCCCTGCATCCGGCACGCCGGACCACCCTTCGCTCAGCACTCACAACTGCCCGGCACAGTAGAGGACACCACTGACAATTGACGGCGGACGGCCCAAAGACGAACATCCCCTACGGCAGGCGCCCGCTCTACGCGGTCACGCACGCCGCGCTCCCTGCCACTCGCTGCCCGGCCCATGAACGAAGGGCGACGCACATGAATGAAAATGAGGCACTCTCGCGCTAACCTCCCAGGTCAGCAAGT # Right flank : CCCAGTAGTCGTTCTCGGTGAACTCCCAGTCGGTGTCGGCCCCGCATGTCGGCGTACGGACTTTTCTCCCCGGTGGCGTACGGACGAACGTCCCCAGTTCTGGCCACGGGCAGCGGCAACGGGACAGAGGATCTCGGTTGAGATCGATGACCCGAGCAGGGACACTCACGCGATGAGCCCCAGCACATCGTCGGAGCCGATCGAGCGAGGGTGGGACGAGCCCTGGTATCGGGTCCGCATGGAGAACTTCCAGGCATCGTTCCTGCCCAGCGCCAGCGAGGACTTGGACGAGGTCTGCAACGTCGATGTCTTGGTGACTCTGACGGACGGATCCTGTTGGACCGCGACCATGTTCACTGTCGCGGAAGTCGAGCGCCTGATGAAGCTTTGGACAGGGACCGACGAGGCCCTCGGGGGCCGGTATTTCTGGGTCTCGGACGGCCTGATCGTCAGGGATCCCGGCATCGGCAGCATGACCGGCGTGATCGCCGAACTGATCG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCACCCGCGGGGATGCTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGGCCCCGCACCCGCGGGGATGCTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 2685-3565 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAXYD010000013.1 Streptomyces sp. McG5 NODE_13_length_30446_cov_62.6761, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ===================================== ================== 2685 28 96.4 37 ............T............... GTACGGCGTCACCGAGCCAGGTCGCCGCCTCCACGTC 2750 28 100.0 33 ............................ GGAACTCGGCGTGGAGGACGCCCCGTACAGCGT 2811 28 100.0 33 ............................ CCTCTGCGCCCAGGTCTTGACGGCGGTCATGTC 2872 28 96.4 33 .............G.............. TCCGACTGGTCCACCCACAGCCACATCGGCATC 2933 28 100.0 33 ............................ CACGGTGAACGACGGCGCCGTCTACACCGGCAC 2994 28 89.3 33 ...............A.....T..T... TACGCGCCGCCGCGCCCCCGCCCTCCTCGTGTC 3055 28 92.9 33 .............T..........T... GGTCTGCGCGGTGGTCTCCTTGGCCGCGCTCAG 3116 28 96.4 33 ........................T... GCTGCACTCCGCGCCGGTGGTGGCGAGGATGTC 3177 28 89.3 33 ..T......T..............T... GCAGCTCGGCCTCTGCCGACGCCTGGGCATCGC 3238 28 96.4 33 ........................T... CGAGTCGGGGTTCGTGGCCGCGACGATGAACGG 3299 28 96.4 33 ........................T... GATTCCCGGACCGGTCTCCGCCGGCCCCTGATC 3360 28 92.9 33 .........C.......T.......... GGTCTGGTCCGTTATGAAGGAGGCCGGCGCACG T [3365] 3422 28 96.4 33 ..............T............. CTGTCCATCGTGCGGAGCGCAAGCGCTACAACA 3483 28 100.0 27 ............................ GAGGCCAAGGTCGGCGCCGCGCGTCGC 3538 28 82.1 0 .....T...........T.A...C...T | ========== ====== ====== ====== ============================ ===================================== ================== 15 28 95.0 33 GTCGGCCCCGCACCCGCGGGGATGCTCC # Left flank : CGGCAACGGGACAGAGGATCTCGGTTGAGATCGATGACCCGAGCAGGGACACTCACGCGATGAGCCCCAGCACATCGTCGGAGCCGATCGAGCGAGGGTGGGACGAGCCCTGGTATCGGGTCCGCATGGAGAACTTCCAGGCATCGTTCCTGCCCAGCGCCAGCGAGGACTTGGACGAGGTCTGCAACGTCGATGTCTTGGTGACTCTGACGGACGGATCCTGTTGGACCGCGACCATGTTCACTGTCGCGGAAGTCGAGCGCCTGATGAAGCTTTGGACAGGGACCGACGAGGCCCTCGGGGGCCGGTATTTCTGGGTCTCGGACGGCCTGATCGTCAGGGATCCCGGCATCGGCAGCATGACCGGCGTGATCGCCGAACTGATCGAGAACGGCGAGTTCTCTGGGATCTTTCAACGGGTGATCAACGACTGACCAAAGTGCTCGGCCGCCGGAAGCGTCGTGGATGGCCAGGCCACGTCGTTCTCGCGCTCGATGGCC # Right flank : TCAGGTTCGGAACGGGCGGGCGGCGCCTTGTCGGGTCGGCCCTGGGCGCCTTCGGTATCCGTACGCCCCCTACCGCCCCAGCCCGGCCCGACGCACCGTGGCCCTTCCGGCGCAGCGCCGGACCAGGAGGAGGGGCGGCAATTAACGCCCATCGTGTGGAGCGCAAGCGCTGCAACAGGGCTCTGGGTGGGTGTGGAGTCAGACGTGCGGCTGGTCATGCGTCGCCCCGCTGCCCACCGCGCCGGTAGCCTCGCCGTATGAGTAGGCCGCCAGAGATCACCCGCACCGAGTGCCGGCAGTGCGGTACCGAGATCTACGGGGTGAACGGCCGCTACTCCTGCACCGTGTGCGGCTGGGTCAACCCCTGGTACGAGGGGCACGGCGAGCTGCCCACTGCCAAGGACGACCCTGACTACCCGCGTCGTAGAAACGCCCGCTGAGTTACAGCAGTCCGAGGTCCGTGTCCGGTCGGCACATGCTGCAGGCCTCCACGTCGACGA # Questionable array : NO Score: 5.41 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.00, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCACCCGCGGGGATGCTCC # Alternate repeat : GTCGGCCCCGCACCCGCGGGGATGTTCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGGCCCCGCACCCGCGGGGATGCTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [28.3-25.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 6990-9753 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAXYD010000013.1 Streptomyces sp. McG5 NODE_13_length_30446_cov_62.6761, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =================================== ================== 6990 28 100.0 33 ............................ CCGCTCCTCGAAAGTGCTGACCGCCGAGCCCAC 7051 28 100.0 33 ............................ GCGCATGGGTTCCTCGATGCGGCGAGGCCGCGG 7112 28 100.0 34 ............................ GTAGGCCGAGTCATAGCTGATCACCTGGCGTTTC 7174 28 100.0 33 ............................ CGAGCGATGGCCCGGGAATCTCACCTCCCGGGC 7235 28 100.0 33 ............................ GGTCTGAGCCATGGTCGGCCCCGCACCCGCGGG 7296 28 100.0 33 ............................ GCGCCTGGCCGAGGCCGCGCGCACGATGGTCCA 7357 28 100.0 33 ............................ TGGCTGGCCGACCTCATCGGCCGCAAGAGCCAC 7418 28 100.0 33 ............................ CGTGCCGTGCGCGATGCCCGGCGTGAGCGTGAC 7479 28 100.0 33 ............................ GCTCTCCACGCTGCTCCGACTTTGCGAAGCGCT 7540 28 100.0 33 ............................ GGTACATGACTCTCTGCCGAAGGTACACATCTT 7601 28 100.0 33 ............................ GCTGGCCCACGACAAGGCCGACGTCGGCGCCGC 7662 28 100.0 33 ............................ GTGCTGGACGCAGATCCAGAAGCACCACCCGGA 7723 28 100.0 33 ............................ CTTGCCCAGGTCAGATGGGGTAACAGTCGCCCG 7784 28 100.0 33 ............................ GGCGTCGTGCGGGCCGGGGGCGTTGAGCACGAT 7845 28 100.0 33 ............................ GCGCGGGACGAAAGGAAGCGGCCGACCTTTGTG 7906 28 100.0 33 ............................ CCATCATGGTTGCCGCCCCCTCACTAGTCAGGC 7967 28 100.0 33 ............................ TGCTCCATTTCCGGCCTGTCCGAAACGTCCCCG 8028 28 100.0 33 ............................ CTCCGGCCACCGCCGCCACAGCGAACTGCCGAT 8089 28 100.0 33 ............................ CGCTTGTCCGTGGGGACGGGGCTGCTGTAGATC 8150 28 100.0 33 ............................ TGGGCCTACGCGCCATCGCCGCCGCCGCCAAGG 8211 28 100.0 33 ............................ GTTCTTGAAGGCGTCGGTGGCGGTGGCCCGGGA 8272 28 100.0 33 ............................ CGCAGAGCTGACCCGCCGCGTCCGGGCCCTCAC 8333 28 100.0 33 ............................ TTCAGCATCGACCTCGGCGCCCGTGAGCGCGAT 8394 28 100.0 33 ............................ CGACATCGGCCTGTTCCTGCGGGAGATGAAGAC 8455 28 100.0 33 ............................ GCCCTCGTGCAGGTCCACCCGCCACCCCTGTGC 8516 28 100.0 33 ............................ CGAGCGGAACGGCCGGCGGTCCCCACCCTCACC 8577 28 100.0 33 ............................ GTCGTGGGCGCCGGGGTGGCGGACGCCGATCGA 8638 28 100.0 33 ............................ GAGGCGGACGGCGGGTATCTCGCGCTGTGCCCG 8699 28 100.0 33 ............................ GACAGACGTCGCCAGCGGGAGCAGCAAGTCCCC 8760 28 100.0 33 ............................ GCCCAGTACGGCGCCGGCTACCAGACCGTGCGC 8821 28 96.4 35 ..........................C. GGCGTCGGGCCCCTCTCAGTTGTCCCGCCAGGAGT 8884 28 96.4 33 ..........................C. GCCTCCCACCGTGCGGTGGGGCATCGTGCCGGT 8945 28 96.4 33 ..........................C. GCTGCTCGGCGTGACAGTGGCCGGGCGTAGGCT 9006 28 96.4 32 ..........................C. GACGGGGAGCGCCGGATCGCGGTGTTCTCCAA 9066 28 96.4 33 ..........................C. GTACGCCGCCCTCCTCTACGGCACCTTCGAGCG 9127 28 92.9 33 ...........G..............C. GCCATGCTGAGGCTTGATACCCACCGCCCTATC 9188 28 96.4 33 ..........................C. CGGCCAGCGGCCGGAGGGGAGTGGGGGGTGAGC 9249 28 96.4 33 ..........................C. AGGCATTGCCCAGTTCATTGACGCCACGTGGGA 9310 28 96.4 33 ..........................C. GCCGTCCTCGATCGACTCGCGCACCGCCTGGGC 9371 28 96.4 33 ..........................C. CGGTGTCCTCGACGGTCGCCGATGCCGGCACGG 9432 28 96.4 33 ..........................C. GGCCGACACGTCGACGTCGCCGTAGTCGATGGA A [9453] 9494 28 92.9 33 ...................A......C. GCCGGTGCTCGACGTTGCGGATGCGCTCCTGGA 9555 28 92.9 33 .............G............C. GGCGTACCCGCACCCGGCCCGCGTCGACGCCGC 9616 28 85.7 21 .............G........CA..C. TCAGGATGCGGCCGGGGCCCG Deletion [9665] 9665 28 89.3 33 ..............T...........CG GAAGGTCGGGGAGATGGTCGATCCGGCGTTGCT 9726 28 82.1 0 ....T............A...GC...C. | ========== ====== ====== ====== ============================ =================================== ================== 46 28 97.8 33 GTCGGCCCCGCACCCGCGGGGATGCTTC # Left flank : CGCCGGCCTCTTCGTCACCCACCGCCTCGCCTCAGCCCGCATCGCCGACCGCGTAGTAGTCCTCCACCACGGGCGCGTCACCGAATCCGGAACATACGACGAGTTGCTACACCAGCCCGGCAGCCGCTTCGCCGAGCTACACCAACTCCAAAGCGGAACCGAACTGGTCCCGTGAACATTGCCCCCGCCTGGCGTCGGCCCTCCCACACCTGACCCCATTCCCGGGAGAGGACAAGCCGCCTACCAGCAGCGCCTGGAGCAACGCCCCGTACCCCCAGCAGAACCAACAGCCACCTCAGCGCGACGAGCAGGCACGCACCGTCCGGGGATTGGGAAGGTGTGACACCCTCCGATTCCGTACGGTAGGCGAGCCTCTCTCGGAGGTCGCGTACATCGCGATCTCTGAAGACGATCCCCATTCGCTCCCGACCCACGAACGAAGGGTGAAGCACATGAATGAAAATGAGGCACCCTCGCGGTAACCTCCCAGGTCAGCAAGT # Right flank : CCCGCAACGGAGAGCAGTTGGAGATCACCCTCTAGTACTCCAGCAGGATTTCGCAGTTTGACCTGGTCTTTTCGCCGGGTGGCGGGAGTGTAGCGGGACTCCGGTCGTGCGGGGGCGGTCTCACGGAGACCGCCCCTCGATCGTGCGACAACGCCGCAGGTAGTGACAGCGGCGGGCGACTGCTTGGCGTCGGCGGCGCCAGTTCGACCAGCTCAGCGTGTGGTGTAGTCCCCGGTGTCCACTCAGGTGCGGGGGCTGGGCACGACAAGCTGCCAGGAGTCGCCGAACCTCCGCCACTGTGAGCCCGATGACCCCGGCTGTCCCACCTGTTCCGCCCCCTTTTCCCAGGACTGGTGTGCCATGGCGGTCAGGAAGGCGTGCGCGAGCATGGCCAGAGTGATGTGCCGATGCCAGCCCACGTAGCGGCGGACCTCGTACTGGTCCAGGCCGCACTCGTTCTTCGCGGCCTGGAAGCACTCCTCGATCGCCCAGCGCGCCCC # Questionable array : NO Score: 6.13 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCACCCGCGGGGATGCTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGGCCCCGCACCCGCGGGGATGCTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-19] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 14130-16171 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAXYD010000013.1 Streptomyces sp. McG5 NODE_13_length_30446_cov_62.6761, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 14130 29 100.0 32 ............................. TGCTGGCCGATCTGGTGCTGCCAGATGGCCTT 14191 29 96.6 32 ............................C CCGTGGGCCGGGATGGCGTCCCTGCCGTACCG 14252 29 96.6 32 ............................C CCCCTCCGGGACCCTCCGGAGGGGGCTTCTGG 14313 29 100.0 32 ............................. TCGATCCCGATCAACGAGCTGTCCGCCGCCGC 14374 29 96.6 32 ............................C CCGGTCAGCATCGCGGTGAAGACCTGTTCCTC 14435 29 100.0 32 ............................. TACCTGCGCCCCTTCACCACGCTCGCCGTGGG 14496 29 100.0 32 ............................. TTTCCCGGCGGCTTGCGGTGCAGGCTGCGGGG 14557 29 96.6 32 ............................C CGCAGGTCAGCGACCGGTACGCCGCCCGTACG 14618 29 100.0 32 ............................. GGCATCCCGCAGCCTGACCTGGAGGTGCGGCC 14679 29 100.0 32 ............................. AAAAATCCAGGCCTGGCGGTGGCGCGCTGCCC 14740 29 96.6 32 ...........G................. ACCTCGTGGGCTTCCTCTTCACCGCTCAGGAC 14801 29 100.0 32 ............................. GCGTACCAGCAGCTCGCCGCCGAGGGGTACGT 14862 29 100.0 32 ............................. CCGTCCCGGTACGAGAGGGGACGCGGATGAGC 14923 29 96.6 32 ............................C CTCGCCGGCAGTAGGCGGCCACCGTGATCAGC 14984 29 96.6 32 ............C................ AGCCCGGCCACGTTCCGCTGGCACCTCGACAA 15045 29 96.6 32 ............C................ GCGGCCGTCACCGTGGTGCCGAAGATCAAGAC 15106 29 96.6 32 ............C................ GGATCGTCGCCGACCTGGACCTGCTGCCCGCG 15167 29 96.6 32 ............C................ TGGTCTTCGGGCGAGCAGCCGCCTCCCGGGTG 15228 29 93.1 32 ............C...............C GCGAACCTCGCCCCGTATCTACTGCCCGAGCT 15289 29 96.6 32 ............C................ TGCGGACCCTGGGGGCGCATCTTGAGATCGAG 15350 29 93.1 32 ............C...............C ATGCCCGCGCTGGGCGGTGACGCCGAGGAGCT 15411 29 96.6 32 ............C................ GTCCCCCGCCCGTGGCGACGCTCGATGAGCCC 15472 29 96.6 32 ............C................ CGGCTGGACACGGCCTCCGCCCAGATCGCGCA 15533 29 89.7 32 ............CC..............C AGCGCCTTGTAGATCATGTGCTCCACGGCGTT 15594 29 86.2 32 ...........GCC..............C CAGACGGTCTCGCCGCGCAGCGCGTTCAGGGC 15655 29 93.1 32 ............CA............... ATCTCCGAGACCGTGCCGAGGACGTTGCCGAG 15716 29 89.7 32 ............CA..............C TGTCAGTCGAAGGACCGGTTGCCCCACCACAG 15777 29 93.1 32 ............CA............... GCGCGGGCATCCTGTGAGCCGCCTCCGCCCCG 15838 29 93.1 32 ............CA............... AGGGACGGCCCGCGGTTCGTGCGTCGGCAGGT 15899 29 93.1 32 ............CA............... CCCGCCGCTGCTGACGGCCCGTTCGAGAAGCT 15960 29 93.1 32 ............CA............... ATGTCCGGCACCGGCATCCACACCGCCATCGG 16021 29 93.1 32 ............CA............... TTCTTGTGCACAGGGGTGTCGCACTGGCGCCC 16082 29 89.7 32 ............CA..............C GGCGGTGAGGCGGACTACTTCAAGGGTGTGCC 16143 29 93.1 0 ............C...............C | ========== ====== ====== ====== ============================= ================================ ================== 34 29 95.6 32 GTCGGCCCCGCATGCGCGGGGATGCTCCG # Left flank : AGCTCCTCGTCGTCCATGCCCGGACAACGCGCGGACTGATCCGGACACGATCCGGATCAGTCCGGACCGGCGTCCGGATCGTGCCTGGACGCCGGACAGCCATAAGGCCACCCCGAAGGGTGGCCTTATGGCGTCGGCCGACTGTCGAAAGTCTCAAACTGGTGCCGCCGTATCCGGTGGCAGACGACCAGCCCGGGCACCGGCTTTCTACGGGCGACCGCCATCTCCGGTCGTTGGCGGGGCCATGCTGGTGGGCCGGTTCGGCACAGTGCCAGCAGAACCAACAGCCACCTCAGCGAGACGACCAGGCGCGCACCGTCCGGGGATTTGGCAGGTGTGACCCCCTCCGGTTCCGTACGGTAGGCGAGTCTCTCGCGGAGGTCGCGTACGTCGCGATCTCTGAAGACGGCCCCCGCCATTCGCTGCCGGCCCACGAACGAAGGGTGAAGCACATGAATGAAAATGAGGCACCCTCGCGGTAACCTCCCAGGTCAGCAAGT # Right flank : CGCGCCGTCCGGGACGTCGGCTCCGAGCCAGCCTGTGGTCATTCGATCGGGGCTCACTTCGGGCCGCTGCGGCAGCTCACCTTCGGGCTCACTGCGCGCGGCGGGGCCGGTGCTGCGGCGGGATCGCGTTTTTGCCCTCAAGGAGCATGATCGCACGGTCCGAGGCCGGAGCGAGGCCCGAACGGGAGGGTCATGCCGCCTTCCTGCGGCCGGGGCCGAGGATCTCCAGCCGGCGGACGGTCTCTCGGCCGCCGGTCTCCTCGGCGATGCGGTCGAGCAGCGCGTGCTGGCGGTGGCGGACAGCGGTGGCTGCGGCCGAGGAGTCAGGCTGGAGGGTGAGGGTCGCGGTGTCTGCGTCGTACTTGACGGCAGTGACGCGCCCAGCGAGGTCGTCGGCGATGTGCGACCACCGGTCCAGCACGCCGCCGGCCGCGACCGGAGCCGTCCAGGCGCGGTCTGCGATGAGCTGCTGGATAGCCTCGCCGAAGGAGACCGGCTCC # Questionable array : NO Score: 5.35 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.31, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCATGCGCGGGGATGCTCCG # Alternate repeat : GTCGGCCCCGCACGCGCGGGGATGCTCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGTCCCCGCATGCGCGGGGATCCTCCG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 1648-4851 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAXYD010000276.1 Streptomyces sp. McG5 NODE_276_length_8307_cov_57.8751, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 1648 29 96.6 32 ............................C TGCGGAGGTGCCTTTCCGCAGGTCAGAGCCGG 1709 29 100.0 32 ............................. GAGTGGCTGTCGGCGACCTGGACGGACGTGGT 1770 29 96.6 32 ............................C TCGCTGCGCTGATCTGCTGCGGGACGGCGGGC 1831 29 96.6 32 ............................C TGCTGATGCTGCGGGCCGGTCTCCAGGGCCGC 1892 29 100.0 32 ............................. GGAGCAGGGGCAACGCTGGCCGCGATCTGTGC 1953 29 96.6 32 ............................C CCATACACGCGCGGCCCCTGCCCGAGCTGCAA 2014 29 100.0 32 ............................. CCACTGCTCGTGCTCGACTTGCGCCTGGTCCT 2075 29 100.0 32 ............................. GGCATGGCGCTGGAAGGCGTGCGGCTCGCAGA 2136 29 96.6 32 ............................C GCCGGCATCCACACTTCGCCGCCTCCGCGCTC 2197 29 96.6 33 ............................T CGAGACTCGCTCGCACGTCAGATCGCACGTCAG 2259 29 96.6 32 ............................C TCCAGCTTGACCAGCACGCTCGCCCCGCTGGT 2320 29 100.0 32 ............................. GAGGTACAGCAGTCCGTCCAGGAGGCGTTCTT 2381 29 96.6 32 ............................T CGCTGAGGTCGCGGCCGAGCTGGCGGCGGCCC 2442 29 96.6 32 ............................C TTGCTCGGCCTCGGCCGTCCCGATCCATATAC 2503 29 100.0 33 ............................. CGGCGCCGGATCTCGGTGTGGGACGGGCGGCAG 2565 29 96.6 32 ............................C TGCGGCACCTGGTTCAGCTCCCCCACCGGGTC 2626 29 96.6 32 ............................C TGCCTCGCCAACAGGACATCGGCGCCGAGTAC 2687 29 96.6 34 ............................C CCCCCCAGGTCAGGGGGTTGCCGATGGCGGTGCG 2750 29 100.0 32 ............................. TCCGGGACCCCTTTGCGTAGTCGCCACCCGAC 2811 29 100.0 32 ............................. TGCTTTTGGGTCGCCCGGGGCGGTGCTCAAGA 2872 29 96.6 32 ............................C AGGCTCACCCAGTCGGTCCTCGGCGCCATACC 2933 29 100.0 32 ............................. GGGAGGCAACTGGGGAGGTGGGGAGTTCTCCC 2994 29 100.0 32 ............................. TCGGGGCTGGGGCGCAGGTCGGTGGCGATGTA 3055 29 96.6 32 ............................C GCCGTACCCGCACCATCGAGCGGACCCTCCTG 3116 29 100.0 32 ............................. GCGTCCTGGAGCCACGTCGCCGTCCCCGAGCT 3177 29 100.0 32 ............................. GGTGTGTCGGCTGAGGGTTGGGCGGCCGGTTG 3238 29 100.0 32 ............................. TGGGCGGCCTTGATGCCGGTGGAGGTGACGCC 3299 29 96.6 32 ............................C TCGACATCCCGCAGATCCAGCCCGGCCACGAC 3360 29 100.0 32 ............................. GGAGGGCAGCGCCAGAAGTCGCCCGGCACCTG 3421 29 100.0 32 ............................. CGCTACACCACCGACCACGGCCGGGTGGACGA 3482 29 100.0 32 ............................. CGGGAGGAGGCCGAGGCCCGCGACCGGGCCCG 3543 29 96.6 32 ............................C GACGGCCGCGTGGACGGCAACGCCCGCTTCTA 3604 29 100.0 32 ............................. GCGCGGCGGGTGGCGGCCGCGTCGCCCATGTT 3665 29 100.0 32 ............................. CGATGACCCCTGGGGTAGGGCCTCCGGCTTTC 3726 29 100.0 31 ............................. GTGGCCCGGCCGGCGGCCCGCTTCCTGAGAC C [3752] 3787 29 100.0 32 ............................. GCGGCCCGGCGGGCGGGGTCCTGCATGGTGCC 3848 29 96.6 32 .................C........... TGCACTCACCCTGACCTCGACCTGCCCGGAGG 3909 29 96.6 32 ............................C CTGATCCCGCTGCCGATCGACAGCTGGATGCC 3970 29 100.0 32 ............................. GCTTCCTGGAACCCGGCGTGGGTGGTGCGGGC 4031 29 96.6 32 ............................T CTGCGCGACGGGTTCTCCTCCCGCCGCGTCGC 4092 29 100.0 32 ............................. GTCTTGGCCAGCCCTGGATTCTGGGACACCGC 4153 29 96.6 32 ............................C GTCATCGGCGGGTCCAGCCGGCCACCGGGCGA 4214 29 100.0 32 ............................. GTCATCCAGGACACGCTCGCGGCCGTCACCGC 4275 29 100.0 32 ............................. GCGTCGCGGCCCTCGGCGGCCCGGCGTTCCAT 4336 29 96.6 32 ............................C TGTCCGCGAGCTGCCGGTGGTCCGGCTGGTCC 4397 29 100.0 32 ............................. ATCGAGTCCTCGGCCATCCCGTCCTCATGTCG 4458 29 96.6 32 .........C................... GCGTCGGCTGCCCTGGAGCGCGCGGCCGAGGA 4519 29 93.1 33 ........G...................C TCGTCCCAGGTGATCGCCATGGGCACTCTCGAA 4581 29 100.0 32 ............................. CGGTGCCCGGCGACGTCGCGGGCCAAGTCCTC 4642 29 100.0 32 ............................. GCCCGCCAGCTCCGCTACGACCTGGACGAGCT 4703 29 96.6 32 ......................C...... AGGTCATCCGCGACGGCGGCCGGACGTTCGCC 4764 28 89.7 31 .....T.T........-............ CGCGCCACGCAGGACCACTGGCGCACCTGTT 4823 29 93.1 0 ..............C.............C | ========== ====== ====== ====== ============================= ================================== ================== 53 29 98.1 32 GTCGGCCCCGCGCCTGCGGGGGTGCTCCG # Left flank : CCGCACAAGACACTCATCCGGCCACCCGCTCACACCTTGACCTCTCGGCAGCTGCGCTCGGGGAACAGCACATCGCCATCGTCGGACCAGAGTTCGAAGACCAAGCCCCGCCCCCGGGACAACAGCCATGACTGTCATCATCCTGATCGCGGCTCCAGAAGGCCTACGCGGCCACCTCACCCGCTGGATGGTCGAAGTCAACGCTGGAGTCTTCGTCGGCAACCCCAGCCGGCGAATCCGCGACCGTCTGTGGGAACTCCTCACCAACCGCATCGGCGACGGTCAAGCCGTCCTTGTCGAACCCGCCGCCAATGAACAAGGCTGGGCCGTCCGTACTGCCGGCCGTGACCGCTGGCGGCCCGTCGACTACGAAGGGCTTATCCTCTCCGCTCGAAGGCCAGCACATACACAAGATCGACAGAGCCGGAACTGATCGGTACACCGCAATGCAACTAAATGAGAACGGCAGACCGCTCAGATAACGCCGCAGGTCAGCAAGT # Right flank : CTTCCCTTGGCGTACGGCGTCGGGGAGCCAGCGGTCGGCCCGGCCGACTGGCAGTCGCCCTCCGGGGCGGCCGCGGATCGCAACCGCCCGGCAGGGGAAACCCCGGGCCTGGGGCTCAGTCGTCGGGGGTGGTGTTGGACGCGTCGCAGGACCAGCAGGTCCACTCTCCGGGCAGTTCGTAGTGCGTGGTGGTCCAGAACCCTTTGGGGCGTCCCCGGATCACGTTGATCTCCCAGCACCGCCAGCAGTTGAACTCGAATTCTTCCACCACTTCAGCATCAACAACTCGGGGTGATCGGGCGGCCGACTGCCCGAAAGTCGATCAAATGCGGCTGAATCGTCAGGCTTGCCGAGCAGTCAGAGATCTGGGCAAGCCTTCCACCTGGTCTCTTCGTGGGTTGGGCAAGCCTTTCGGCAAGTGGGCGTGTGGAGAGTGGGGCACATCCGTTCCCGAGGAGGTGTGCCGTGCACGACTGCGGACCGGCGCTGACGCCGTACGA # Questionable array : NO Score: 5.91 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.75, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCGCCTGCGGGGGTGCTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGGCCCCGCGCACGCGGGGATGCTCCG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 633-951 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAXYD010000713.1 Streptomyces sp. McG5 NODE_713_length_2423_cov_15.9956, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== =================================================================== ================== 633 24 79.2 67 ..A..T..A.A....C........ AATCAGCCCGGCCAAAACCCAGCTCAGCCAGAACCCAGCCCCGCCAAAACCCAGCCCGGCCGAAACC G,A [637,648] 726 24 100.0 46 ........................ TCTTTGACCGCCCCGGTCGAACGGCCCGCACAGCCCGGCAAACCCC 796 24 100.0 40 ........................ TCGTGAGCCGGCACGGAAAGCCGGACAGCACCCCCACCGA 860 24 95.8 43 ...............C........ CCTCCATGACCGGCACGGTCAAGGGGCGCCCCCGCCAAGCGAA 927 24 83.3 0 .......C.....A.A.....T.. | G [946] ========== ====== ====== ====== ======================== =================================================================== ================== 5 24 91.7 49 CAGCCCGGCCGGCGCTTGAGGCCA # Left flank : ACGCCGACAAGGACGCAGGCCAGGGGAACGACTCAAGGAACGGTGCCGATGCCCCCGACACCGGGGACAAGGGCAACGGTTCCGGCGCCTCCGGCGGCTCCAGCTCCTCCGGCGGCGGTGGCGGCTCCGCCCCCACCGAAGACTCCGACGGGGACGCCAAACCCCCGTCCGGCGCCCACCGCTACCGCAACGGCGAGAACGCCAAATGCCTGGCCGCCCCGTTCAACAGCCCACCCACCACCGCCGCCTGCAACGGCTCCGGCACGGTCTGGGCCTTCCGCCCCCTCCCGGACGGCTCCTTCGAGATCGTCCACGAGTCGGGCCGCTCCTGCCTCTCCTCCGGCGCCGGAGGCACCCTGCTCCTCTCCTGCAACCAGGCCGAAAGCCGCCGCTGGCGCACCGGCCCAGAAGGCACCCTGAAAAGCGTAGGAACCGGCGGCTGCCTCGGCACAGTCAACGGCTCCCGCATCACCACCACCCAGTGCACGGGAAGCCCGTCC # Right flank : ACACCCTGCCGACCACCAGCCCGCGAATCCCCTCCCCCACCTCTTCGGGGTACCGCACGACCTTCCCGAACCCCAGCCGCACCTCCTGGTGGCTGCGCCCGGCGTGCTCGAACCGCAGGGTGATCCCGTACTGGTCGAGCCGGGCGGGACGCACCCGCACGGCAGCCGCCCGTACGTCGGCGGGGGCGAGCCGCGCCAGCGCCCGCACCATGTCCTCGTGGGCCGAGTCGAGGTGGGAGAGGAGTTCGGCCTCGGCGCGGGCCAGCGGGTCGGGCTGGGCCACGACCAGTTCGTCGACGCCGATGCGGCGGCTGCGGCCGTGCTCGGCGAGGACGGCGTACTCGGTGTGCAGGTGCAGGCCGCGGTCGGCGGCGGTCCCGAGCCAGCCGTGCAGGCTGAGCCGGGCGCGGACGCGGTCGCGCAGGTGGACGGGGGCCACGTCGGTGAACTCCACGACGGCGGGGAGGGTTCCGCCGAGGGAGGCGTCGAGTTCGGCCCCG # Questionable array : NO Score: 2.60 # Score Detail : 1:0, 2:0, 3:0, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAGCCCGGCCGGCGCTTGAGGCCA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.10,-1.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 366-93 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAXYD010001075.1 Streptomyces sp. McG5 NODE_1077_length_509_cov_7.43194, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 365 29 100.0 32 ............................. TTCAGCAGCCGCCACCTGACGGGGTTCCCGTA 304 29 96.6 32 ..............G.............. CCGACGGCGAGGGCGATGACGGCCTGGACGAA 243 29 100.0 32 ............................. AACGGCAAGGGCGACCCGGCCCGACGACAGGC 182 29 100.0 32 ............................. GACCGGGCAGGGCGCGGGGGGCGGTCAAGGGC 121 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 5 29 99.3 32 GTGCTCCCCGCGTGTGCGGGGGTGGTCCC # Left flank : GCGTCAGATGTGTACAAGAGACAGGGATGGGCGGGGGCTGATGAATCGGGAGGGGGTGCTATGTCGCTTTCATGTGAAAGGTCGCAATCGGCGAAGCTTGCAGGAACGGGTGGCGGCGCCGGGTAAAGGTGCAGGTCATGGAG # Right flank : CCCGTTGTCATCGCCCCAGACGGGGTGGCCGCAGTGCTCCCCGTGCACGCAGGGAACCCGCCTCACCCCGCCAAGTTGCACTCCCCACAAGCC # Questionable array : NO Score: 6.02 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCGTGCGGGGCTGGTCCC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //