Array 1 1211837-1213908 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP087280.1 Leclercia adecarboxylata strain SH19PE29 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1211837 28 100.0 32 ............................ TACGTCCATATGGAGTACGGAACGGACATAGT 1211897 28 100.0 32 ............................ GTACTGGCGGTGTGCTGGACATGTGGAACCGA 1211957 28 100.0 32 ............................ TACAGGGGAAAGCCCGGAAAACGCAGCATCAG 1212017 28 100.0 32 ............................ CGAAGGCCGCGCCCATTTCGCTGTAAACGTCC 1212077 28 100.0 32 ............................ GTATTAGTCCTCTGGTGTCCTCCGGCGTTCTT 1212137 28 100.0 32 ............................ GGAATATGCCTTGCAATCCATCCCCGCGCAGC 1212197 28 100.0 33 ............................ CTGTACGGCTGACACCGCAGGCAGCACCTGGAA 1212258 28 100.0 32 ............................ GCTGGTTATCGGTGTAAATGTAATGGTTGATC 1212318 28 100.0 33 ............................ GATATCAGCGCCAGCGGTGACGGCCGGGGGAGT 1212379 28 100.0 32 ............................ GCCAGTTGTTCCGTTGTTGGTAAAGTGCGTGC 1212439 28 100.0 32 ............................ GCCTGGAGATAAAAGGCCAGGGGGCAATTCCG 1212499 28 100.0 32 ............................ TGTACTTGAGCTGGCCGCCGACTGCCGTGACT 1212559 28 100.0 32 ............................ AGCGATAGAGAGCGCCATAGTGGATACCACCA 1212619 28 100.0 32 ............................ TGAAAAGGCGACCAGAAAAGCCAAAGAGAAAT 1212679 28 100.0 32 ............................ TGAAAAGGCGACCAGAAAAGCCAAAGAGAAAT 1212739 28 100.0 32 ............................ TGAATTCCATCGCCGTCATGCGGTGCCTTGAC 1212799 28 100.0 32 ............................ TAACTATACCCGGCGATGCGTCAGCCACCAGT 1212859 28 100.0 32 ............................ GCGACACGGCAATTTGAAAAAATGCCCCCGCA 1212919 28 100.0 32 ............................ ATAACCCAGCAGAATAGACGGCTGATCCAACT 1212979 28 100.0 33 ............................ ATTTTTTCGTTATTGCCCAGGGCGCGAATATGG 1213040 28 100.0 32 ............................ CCTGTCGTATCGCCGGAAAGCAAAAACCCCGC 1213100 28 100.0 32 ............................ TTCATCGCTTAAGGGGCTGCCTGCCAATGATT 1213160 28 100.0 32 ............................ AAAAACACTGGTCTTTGCGGCAATGAAATCCC 1213220 28 100.0 32 ............................ ATAAAACGTGGACTCACCCGGCGGCGGGTCGT 1213280 28 100.0 32 ............................ ATAAAACGTGGACTCACCCGGCGGCGGGTCGT 1213340 28 100.0 32 ............................ CACAACTGACAGTTACTGCGCTGGTCGGTGTT 1213400 28 100.0 32 ............................ TCCCTGGTCAAAAATGGCTGGACAACGGACGA 1213460 28 96.4 33 ......................C..... GTATCCGGGTCTAGCGCACAACTCAGGATGATT 1213521 28 100.0 32 ............................ TCGACCTTCATGCCCCGATCAATCAGCGGCAC 1213581 28 100.0 32 ............................ TCGTTGTGCAGGTTTCGCGGATCGAAACGCAC 1213641 28 100.0 32 ............................ GTGGGTCGGCTCCGGCCAAGTTACCGGCACGC 1213701 28 100.0 32 ............................ TACCAATGAGCATGAGCGATGCCCGGAAGATC 1213761 28 96.4 32 .......A.................... ATTACGCACCCACGGACACACCCACGGTTTCA 1213821 28 100.0 32 ............................ TGACGAAGAATGCCCCGTCTGTTAAGGAGGGC 1213881 28 96.4 0 ...............A............ | ========== ====== ====== ====== ============================ ================================= ================== 35 28 99.7 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GCCGCGCTCGGTAAACTCGAAGAGAGCCGATGGCGAGCGGGCTTGAATGATTACTGTCGTGCGACGGCGATCCTGGCGATACCCGCCAACACTGGCTGGCGCGTGGTCAGCCGTGTGCAGGTAAAAAGCAGCGTTGAGCGTCTGGTTCGTCGTTCATTACGTAAGGGCTGGATAACTGAAGAACAGGCGCAACAGCGAATAGCGGAAGGGAAGGACAAACGTTGTCATTTGCCATTTTTACCGCTTAGAAGTTTGTCTACGGGTCAGAGCTTTAAGTTATTTATCCGCCATAGTGAAATACAAACGGCACCAGTAAGTGGTTCGTTTAGTAGCTATGGCCTGAGTGACACGGCAACAGTACCCTGGTTTTGACCCTTTTTTTCGTGATTTTATAACTTGTTGATTTTTAATGGGTGATAGTGAAGGTCAGAAAAAAGGGTTTAACGCTTGAAACGGGGGGTTATATAACAGGATCATAGGGATAGGTATTTTAGGTTCCA # Right flank : AAAAGTGGCCACCGATATCGAGGAGCTGAAATCGTTCACTACCTATTCCATTGCCGATTCGGTACAGGCACCCGTTTTTTTGCCCCGTCTGGCTTATCGCCAGGCGGGGCATTTTTACGTCCTCACCCGTTCAACCGTCTCCTGCCAGGCTTGCCAGCGTGTCTGCAGCCGGGCATGGCGCGCCATATCTGGGGTAAAAGTGACATGCTCCGGCAGATACTGTCGCAGCTGCGCGGTAGTCAGGTTAAACAGCGCCTTACGGGCCAGCAGGGCGGCTCCCATGGCTGAGAGTTCCGGCACGTCACTGCGCATCACCGGGCAGCCAAGCAGATCCGCCTGGTACTGCATCAGCCAGTCGTTTTTCGTTGGCCCGCCGTCGACCATCAGCGCGTTCAGCGTAAAGCCCGGATGGATGCGCATCGCCTGCACCACGTCGGCAATCTGATAGGCAATTGCCTCCAGCGCCGCACGGATCAGGTGCGCCCGCTTCACGCCCCGGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //