Array 1 205432-207846 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEMUH010000004.1 Marinomonas ostreistagni strain USM7 Marinomonas_USM7_unicycler_contig_4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 205432 29 100.0 33 ............................. CATTCTTGGTTACAAACCATTTCACTCACTAAA 205494 29 100.0 32 ............................. TTGATTATATGACAAATTCAAATATAACTCTA 205555 29 100.0 32 ............................. CATATTTTTCTGTAGAGTTTATTCGCTTCATC 205616 29 100.0 32 ............................. GCTCTTTGCTGTTGTTCTAATAACTCTGAAAT 205677 29 100.0 32 ............................. GAATGGCGACAGGCATTATTTTTTAAACAAAA 205738 29 100.0 32 ............................. GCGGTTACATTGTCAGGCACAGGAGCAGGGGC 205799 29 100.0 32 ............................. TCAGTGAACGACGTGGCAAGCTCTCCACTACC 205860 29 100.0 33 ............................. CGGGGCAGAAGCTACGCAAGAAGAAACCGACAC 205922 29 100.0 32 ............................. CATTTGTAAGATTTTCTGTTTCATTGATTCCA 205983 29 100.0 32 ............................. CACCAATATCAATTACAGCATCATCTTCTAGG 206044 29 100.0 32 ............................. CACCAATATCAATTACAGCATCATCTTCTAGG 206105 29 100.0 32 ............................. ATGAATGTAAATCTAGCGGTGATAAAGCAGGG 206166 29 100.0 32 ............................. CGTCGTAAATTCACTAAGACAGCAACGGGTGC 206227 29 100.0 33 ............................. CGTCGCTGGTTCCATTTTGTTGTCGGACTTGAT 206289 29 100.0 32 ............................. ATGCGACTGATTTCGTAAGACGCGTATTTCGA 206350 29 100.0 32 ............................. TGGGCGCTTAAGTACGGCTGGTCACGCGATCT 206411 29 100.0 32 ............................. ATCGCCTACAGCCCTAAAGACGGTGCCAACCC 206472 29 96.6 32 ..A.......................... AAGACATTGTTGCAACAGCATCTGTTTATCGT 206533 29 100.0 33 ............................. TGTGATGTCGTAACCCAATCGGTGAGACGCGGC 206595 29 100.0 32 ............................. TAACCCAAATCTTGAATCACTTCACGCATCAT 206656 29 100.0 32 ............................. TTTTCTGGAATATAGCGCTTTGACTTAACGAG 206717 29 100.0 32 ............................. GGAGGCATTGGGGACACAGCAATTTCTACATT 206778 29 100.0 32 ............................. TGGAACGATTCAGTTTTATGACAACCGAGCTT 206839 29 100.0 32 ............................. TAACCCAAATCTTGAATCACTTCACGCATCAT 206900 29 100.0 32 ............................. TTTTCTGGAATATAGCGCTTTGACTTAACGAG 206961 29 96.6 32 ...C......................... GGAGGCATTGGGGACACAGCAATTTCTACATT 207022 29 100.0 32 ............................. TGTACGCCGCTAGTTTGGCAGTGCCGGACATT 207083 29 100.0 32 ............................. GGAATCAATACCGAGTGGGTGCGAAATCACTT 207144 29 100.0 32 ............................. CAGAAGCAAGCAGGCGCACAGGTTATCTACCA 207205 29 100.0 32 ............................. CCGACACCCTCAACCCAGAGCGACCTGATGCT 207266 29 100.0 32 ............................. GTGGAGAAAATGGATAAGACAACGAAAATGAT 207327 29 96.6 32 ............T................ ACTACAACGAACAACGAGGAAAACCGCACACA 207388 29 100.0 33 ............................. TTCTGCCACTTCGATTTGCGATCATCAACTTGC 207450 29 100.0 32 ............................. TTTGTAACCTCGAATGAAGATGGAACATTAAT 207511 29 100.0 32 ............................. GAGGCCGCTAGATGAAACGCTTTCTAATGTGT 207572 29 100.0 32 ............................. CGGAAATTTATCGCGCTCCATGACATCGTTGA 207633 29 100.0 32 ............................. TAGACCAGACTTTGGCGCCGATCCGTGAACGT 207694 29 96.6 32 ........T.................... TAGACCAGACTTTGGCGCCGATCCGTGAACGT 207755 29 100.0 32 ............................. TCTATATATTACTCTGGGACTGACTGTAAAGA 207816 29 89.7 0 ......T..T................A.. | TT [207841] ========== ====== ====== ====== ============================= ================================= ================== 40 29 99.4 32 GCGTTCCCCGAGCACTCGGGGATTAACCG # Left flank : GACAGTGGGCATCGCAGTCACTAGAGGAGGGAAGTTTATGAGTATGCTGGTAGTAGTAACAGAAAGCGTTCCAGATAGATTAAGGGGGCGTTTAGCTATTTGGTTACTCGAGATTCGCGCAGGTGTTTATATCGGCGATACCTCACGCAAAATACGTGAAATGATTTGGGAGCAAGTCAACGCATTAGCCGAGCAAGGAAATGTGGTAATGGCTTGGGCTACTAATACTGAATCGGGTTTTGAGTTCCAAACTTATGGCGAAAATAGACGAATTCCAGTGGACCTAGATGGGCTTCGTCTGGTGTCATTCTTGCCTCAGAAATAGTTAACATAATGATTTCTATGGATTTTTGGTGGAATTTAGATTTTTAAAAGTCTTTCGAATTAAACTCTTTACAATCAATTAGTTATAGATCTTTAAAAACTTGATATGAGCATTAAATCTTGGTGGATTTTTTTGTGAGATATATTCCTTTATAAAACAATCATCTACACTAAGA # Right flank : GGCCGCAGCTAAGGGGCATACTAGTAGGTCAAATCCTTTCTTTGTTGGTAATTAGTCTTAATTATCTGGCTGTTTTCATAAGCATTGTATCTTTGCAAAACAGGTTTATACTGTATTTATATACAGTATTTTTTGGGTGGTTGTATGCGTGTAACGTATTTGGGTTCAGCTGAGTCGTCTGGTTTTTTTGCGGCGAAGCAGATGAAGATGCCGCTTTATGTGGAGTCGGTGTCGGCGGGTTTTCCATCGCCTGCTCAGGATTTTGTGGAATGCTCGTTGGATTTGAATGAGTTGTGTATTCAGCATCCGAGTGCGACGTTTTTTGTGCGGGCGCAGGGGGATTCTATGGTGGATGCTGGGATTCATTCTGGGGATGTGTTGGTGGTGGATCGGTCATTGACGGCGAAGCATGGCGACATTGTGATTGCGTCGATCCATGGTGAGTTAACCGTTAAGGAGTTGTGTTTAAAGCCTGAGTCGATTTTGCGTCCTCACAATAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCGTTCCCCGAGCACTCGGGGATTAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.70,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //