Array 1 25385-25112 **** Predicted by CRISPRDetect 2.4 *** >NZ_KQ257816.1 Streptomyces acidiscabies strain NCPPB 4445 scf_64481_70.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 25384 29 100.0 32 ............................. GCCGCAGAACTGGCGTGACGAGACCTCGCCCG 25323 29 100.0 32 ............................. GGCCCCACGCCGTCAACACGGAACCCCGTCCC 25262 29 100.0 32 ............................. GAGCACGGCATCAACGCCACCCAGGTCTACGA 25201 29 100.0 32 ............................. GGGGCACAGGTATGAACAGGAGCCCGCGAGCC 25140 29 86.2 0 .........................GGAG | ========== ====== ====== ====== ============================= ================================ ================== 5 29 97.2 32 GTGGTCCCCGCGCACGCGGGGGTGTTCCC # Left flank : GGCAGGTTTCCGCCCATCGTCCACTTGTCCTTCCGCTGGATGCGCCGGCAGCCTGTGCCGGTGCACCGGTGGTAGGCCGACGGGCGGAACCGTTCTCCCTGCTCGCTCTCGAACTTGCTCATGACCTGCGCCGCTGCGGCGATCTCGGCACCCTCCAGGTCTCGGAATCGCTGCTGTGGTCCTTTGCAGGTGGGGTTGGGGCATCGGACGTGGGACATGTGGGCCTCCTCTCGGCGGGGGGGAGGAGCATAGGGCGTGGGGCGGGTGGAGGGGCGGGTTCCGCTGATTTGACGTGCGTCACGCTTCCGTGTGCGGTGGCTTTTTCGCGGTCTCGGCGTGGATGCGGGATGGGGCGCTGAGGAGTTCGACGGAGGTGGGTGGGTAGGGATGGCGGGCATAGGGTTTGGGCCGGAGGTTCGGGGAGAGGTGACGAAATGTCCGGTTCTCGGGAAGTGATGAGAAACGGCTGCTTGCCCGGATAAAGGCCCAGGTCACGGACT # Right flank : GGATTTCCCTGTTGGCCTGGAACGTCCAATGCGGTCAGTGAAATTGAGGGAAGCTGCTGTCACGGTGATTGCGATGCGGTCTGTGGACGGTCAGGGCGAGGTTCAGTAGGCGGCATGCGGAGTCTTTAGGGAGACCCGATAATCGGTTCGACGTCGAATTTGCGGAATCAGCCTGTCCTGACCTCAAAGGGGAGACGTGAATCGAGCCACCGGCACCTTGCTGTCCTTGTCTGCCGCGCTGATCAGTATCGGGGTGACCGTCGCTCCGGCCAGTGCAGCCGATTCCTCGCGTATCGGTCCCGTGCATGTGTCCAGGGGCGGCGGCGAGGAGATCATCCTGTTCGACAACGGTTCTGAGTTCAGGTCGGAATCCGGATCAGCCAGCGATGAAGTCGGATTCCGCGGCGGATCGTTCACATGGGCCGCCGATTTTCAGATCGGGTTCGAGTCCCGCCACTACACCGCGGTCGACGCAGGCACCCACCGGATTCAGATCAACG # Questionable array : NO Score: 5.92 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 32477-32810 **** Predicted by CRISPRDetect 2.4 *** >NZ_KQ257816.1 Streptomyces acidiscabies strain NCPPB 4445 scf_64481_70.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 32477 29 100.0 32 ............................. CAGCGGCACGCGGTCAGCCTGACGACCGAGTG 32538 29 100.0 32 ............................. GACAGGGCTGACGGGATCGCCTACACGACGCG 32599 29 100.0 32 ............................. TTCCGTCCGTCGGGCGGATCGTCCACTACATC 32660 29 100.0 32 ............................. GGAACCCGCGTGGTCCTGGTCGGCAAGAAGGG 32721 29 100.0 32 ............................. GAGCACGGCATCCGTGGCGGACTCCGTCCCGA 32782 29 72.4 0 .........C...........AA.CCTTG | ========== ====== ====== ====== ============================= ================================ ================== 6 29 95.4 32 GTGGTCCCCGCGCACGCGGGGGTGTTCCC # Left flank : GCTCGGTGCCTCGCCGGCTGGATCTTCGCCGGGTTCCTGCGCGTACGGCGGCGCCTGTGAGCAACGCGACAACCGAAAGTAAGGCGAACTCCAGGAGGGTCGACATACCGAACAGGTCCTCTCGTTGCGCGATTGAGGGGTTGCTGGATTCGAGGGTCGGGGCGTTTTGCGAGGTGGCTCCGGGTGGGCTCGGGCTGGAGGGTATCCGAGTGGGGTGGGCGAGGAGGAAGGCAGTGGGTGTTGGCGCCGGTGGTCTCTCAGCCCTTGAATGCTCAGTCTTTCCCCCGGGGGGACTGTGCGCGCTCCAACTGGCGTGGGGGTGAAGGTTGACGTCGGCGTGGATGTGGGGTGGGGGCTGAGGAGTTCGACGGGGGTGGGTGGGTAGGGGTGGCGGGGATAGGGTTTGGTCCGGAGGCTCAGGGAGAGGTGACGAAATGTCCGATTCTCGGGAAGTGATGAGAAACGGCCGCTTGCCCGGATAAAGGCCCAGGTCACGGTCT # Right flank : GCACTCGGCGTACCCCAGCAGTTGTCCCAGGTCAGTCGCGACCTCTTCGCGCCAGCCCCGGTACCCGTACGCGACAGCGCACACGTCGTGTTGTCGGCAGACGCTCGCCACGCTCGTGCGAGTCCCGGAGATCCACGGCACCTTCCTGGAGATGGAAACCCTCGTGGAAGAGGACGAGTTGGTGGCAGCCTTGGACGACATCCGTGTGGCACTGGGTGAACTCGGCGTCAACGCGGACGACTTGACGACGGAGACCTATACCGGCGCCGTCGCTGTAGGACGCCGGTCAGCATCCCGATCACGCCGACCCCGCCAAGGCCCGCCTTCCGCCACCAGCGCCACTCGTAATGTGTCCCGACCCTCTCCGCCCCCATCAACCCGCCCCCCTCGCGCGCCAGTTCCCCAGAGTGCACCATGGACCGCATGACGAAGATCGACAGCACGGTGCCCCACTCGGCCCGTATCTGGAACTACTGGCTCGGTGGCAAGGACAACTACCC # Questionable array : NO Score: 6.03 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [41.7-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //