Array 1 59046-63665 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNBB010000023.1 Parabacteroides goldsteinii strain 1001217B_150727_C5 NODE_23_length_98513_cov_27.4038, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 59046 29 100.0 34 ............................. TATTTACCAGTAGCAGAGATTAAACCCCAATTCC 59109 29 100.0 35 ............................. TTGGTTTTAGGTCTAGTTCCGGTTCTTCTTCTTCC 59173 29 100.0 36 ............................. AGTTTATCACTATCAACAACACAACATTCTAGTATC 59238 29 100.0 34 ............................. AGTTTATCACTATCAACAACACAACATTCTAGTA 59301 29 100.0 35 ............................. AAATAACTATTTTGTCGTTTGCCGTTTCGATCATA 59365 29 100.0 36 ............................. ACTACATGATAATAATATTCGGTCGGTTCATGGTAC 59430 29 100.0 34 ............................. ATAACACATACCGAAACTAAAACTACAACCGTGC 59493 29 100.0 36 ............................. AATCTATATCTTTTTCAGGATTGATAATGTTAAGCA 59558 29 100.0 35 ............................. TCGTCAGATCAGGCATTAACAGGTACATTTCAAGT 59622 29 100.0 37 ............................. GCTTTATTTCATAGATTGGTATATCTTTAGAAAATTC 59688 29 100.0 37 ............................. TTGATTTAACCGTTAGTATTTCATTTACCTTGCTATT 59754 29 100.0 36 ............................. CGGATAAAATCAGCAACACGATCACTGAATACAGGA 59819 29 100.0 36 ............................. TCAATCACAGCGACACCGGAATAAGGTTCATTCATT 59884 29 100.0 36 ............................. AACAGAATATATCATCAAGCAATGTAGATATATTTT 59949 29 100.0 35 ............................. AAGGTAAAAAGAAGGACAAAGATAAAATACAAGAG 60013 29 100.0 36 ............................. TGTAATACGAACTTTACGTAATTGGTTCATATTTTA 60078 29 100.0 37 ............................. ATATTATGGATTCTATTTGTTTACGCGCTGTCTTTGA 60144 29 100.0 35 ............................. CAAGATTTGAAAGGCGGGGACTATTCAGGAGCATA 60208 29 100.0 35 ............................. TTAACCACCTCAAAAGCTGAAAATTCCTTATTATT 60272 29 100.0 35 ............................. TAGATTGCTTTTTGAAAACGGCAATTCTCAAAAGT 60336 29 100.0 35 ............................. AGAATCTCGGCAAGCCAAATCGGAAGCTGCTGCAA 60400 29 100.0 36 ............................. GAAGATAACGGAGTTTTTAAGCTGATAGTATTATCG 60465 29 100.0 35 ............................. TGGGTTATGCCCGCTTCTTTGTTTTTCTCTGCTGC 60529 29 100.0 35 ............................. GCAAAAAAGAAAATACAATCACCAACAAAAAAAAT 60593 29 100.0 36 ............................. TAAGTCTAGGGTAATGTTTGACTTACCCATATCAGC 60658 29 100.0 34 ............................. TCGCTAGATACCATTTTAACTGTGTCCCCAATCC 60721 29 100.0 35 ............................. AAGTTTATGAACAACTATACTTTGGGACAAACACA 60785 29 100.0 36 ............................. TAGATCAAAATGGATATTCCGACCCGGGACTAGTTG 60850 29 100.0 36 ............................. GCACTCCTATCCAGTTGTATGATACTTCTTTTGTGG 60915 29 100.0 34 ............................. GTAATACCATTGCGTAATAATACGTTGCTTACTG 60978 29 100.0 36 ............................. CAAATACAGTAGTTTTGTACCAAGCATATCCGCTAA 61043 29 100.0 38 ............................. TTGAGTTGACACCTGATCTTATGCAAAAAAGATTGGTT 61110 29 100.0 36 ............................. AACCTTTTTCGCGTTCTTCCGGTTCAATATCAAAAT 61175 29 100.0 37 ............................. CCCGTACCACAAAGGCAAAATAATTTAACCGATTTTC 61241 29 100.0 34 ............................. AGAGAAAGAATGGTTCAATATACCTGACTACGGT 61304 29 100.0 37 ............................. GCTGAATAGATAAAGTTCCTTGTTCATTTTATTTAGC 61370 29 100.0 37 ............................. TCATCTTAAACAAACCTCCCATGACAGAGCCTTTATA 61436 29 100.0 36 ............................. AAGATTTCGATGTCCTAAGAACCTATTATATGGATA 61501 29 100.0 34 ............................. GGATACACATCAGTTATAAAACTTAAATAATATG 61564 29 100.0 36 ............................. CTGATATAATCGGGATGTGCTTTCATAGACAACATT 61629 29 100.0 34 ............................. TGGATTTTCAAAGATGAAATACACAGAACTCAAA 61692 29 100.0 35 ............................. ATTAAATTATATGTAGTAAACAAACGTGACATGCT 61756 29 100.0 36 ............................. TCCGTGAGGACCGTGCAGTTTTTTCTAGTCAACAAT 61821 29 100.0 37 ............................. GTTCAAGCAGCAAGATTGTTGCACCTATGACGCATTT 61887 29 100.0 36 ............................. CTCCCTCTTTTGTTGATCCGAACACTTCTGTACGCA 61952 29 100.0 36 ............................. TCGTTGACTCCAATAGATCCTGCCAGTTAATGCCCT 62017 29 100.0 37 ............................. GTTGAATCGATTACTAAAACTGATCCGCGTCGGCAAA 62083 29 100.0 37 ............................. ATCAAAGCTAATCTCATTTAATTTAGCTTGCCTTTCC 62149 29 100.0 36 ............................. AGTCAATAGATGCTTGTAGGCTGAAAGCTATAACTT 62214 29 100.0 36 ............................. AGCATATAGTGTAACCAACAGTAGATTTAGTTTAGA 62279 29 100.0 35 ............................. CTATATAGCTAAAGTCAAGACCTAATTGTCTTTGT 62343 29 100.0 35 ............................. TTATAAACAATGGCTTTACGTTTTAATCCTTCTTC 62407 29 100.0 36 ............................. TTTATTCATTTCCTTTTTTATGAGGGAGGTAGAATA 62472 29 100.0 34 ............................. AAAAAACTGTCAACGTGTCACATCTTCTTGCCTC 62535 29 100.0 37 ............................. GCAGGACAAGTATAAGAGCTACCACACATGCTTCTAT 62601 29 100.0 35 ............................. TGAATTTAGACGCGGCCGTATATTAGACATTTGCG 62665 29 100.0 36 ............................. GACATTTATAATATTCTTTTGTTCCGGCAGGTAACG 62730 29 100.0 36 ............................. AATACAAGTACAACAAAAACTCATTTTCGGCAAATT 62795 29 100.0 37 ............................. AGAATAACCAAAGCAGTTTGAATTTCTTTGCAGCCGA 62861 29 100.0 34 ............................. TCGACATAAATTCCCCTTTTTTCGTAGTTATTTA 62924 29 100.0 36 ............................. TTGTTAATAAACTTAATTGCAACCGGCAATGATACA 62989 29 100.0 37 ............................. ATGCCAGAAACTCCGATAAGTTGATTCGTTTACGAAT 63055 29 96.6 35 ........................A.... TCATTAATACATTCGGCTCCAGGCTTTATTTCGAT 63119 29 100.0 35 ............................. ATGGAAAGAAAAGGAAGAGGCGGTAAAAAAGAAAG 63183 29 100.0 38 ............................. AAAGTAAGCTGACTTTTTTTTGTGTGGGTGTTCCCCTG 63250 29 100.0 36 ............................. ACCGTTCAGATATGCCTTTTCTAACAAGTACTTTAG 63315 29 100.0 34 ............................. TTAGCTTAGAAACTCATTGATTAGTTTGATTTTC 63378 29 100.0 34 ............................. TACTTAAATTGTACTTTTAGGGTAAACAGCATCC 63441 29 100.0 37 ............................. ACAATAACAATTTCATCTTTCTGTGACAATTGCTCTG 63507 29 100.0 37 ............................. TCACGCAGGACTGGAGCAAATTCTTTTTTATAATGGT 63573 29 100.0 35 ............................. CGTACGGGGAGATCGCTCGATGCACCTGTTCGCGG 63637 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ====================================== ================== 72 29 100.0 36 GTATTAATTGAACTAAGTAGAATAGAAAT # Left flank : CTTTTAAAATGTATTGGTAATGTATGTGATCTTAGTTTATGATTGTGGAGAAAAACGGGTTGCGAAGATGTTAAAACTTTGTCGACGTTATTTGAACTGGATCCAGAATTCTGTCTTTGAAGGTGAGATCTCCGAAGTTCGTCTAAAGGAGTTGATAATGCAGGCAGAAACCTTTATGGATAAGACCTGCGATAGTATCATTATTTTTAAGAATGCTTCAAAAGTGACAATGGATAAGCAGATTGTAGGTAAAGAATGCAGCTCTATTGATATATTCCTGTAATAATAGATATTTGTCGATCCTGTAATTTTTGAAATATACAGTGGTTGAAAATATGAAATAAGCTCTTTGACTTGTTGATTTATAGCTGTTTATGTAATATGTCGATCTCCAGTGTTTTTTATATTATTGGAGATCGACATATTTTATCAGGAAAAATGGTTGTTTTTAATTTTTGAACTTATTGATATTTATAAGTTTATGTTTTTGGGACGATAAG # Right flank : TGATGGTGCTGAATAGTTCCAATCTTCATTACCTTGTATTAATTGAACTAACAAATCTCAACTAATATAAATAGAATGAATTAAAATATGGGGTTTACAGCCTTAATTGTATCCCTCCACCGATTTTTTGTATCTTTGCCCCTCAAAGTAAAGTACAAAAGGCAATATGATCAGTTATTTACAGATAGACGGACTGACCAAGAGCTTCGGCGATTTGGTTCTTTTTGAGGATATTACATTTGGTATTGCACAAGGTCAGAAAGTGGGCCTTATTGCAAAGAACGGTACAGGTAAAACAACTTTACTGAATATCATTGCCGGAAAGGAGGATTATGATAATGGGGCGGTTGTGTTTCGCAACGACCTGCGTGTCGGTTATCTGGAGCAGACACCTGTTTATCCGGAAGGGTTGACTGTATTGCAGGCTTGTTTCTATTCTCCCAATGAGACGGTACGCCTGATCGCTGAGTATGAAGAAGCTATGGCCAGCGATGATCATT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTAATTGAACTAAGTAGAATAGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //