Array 1 195149-191007 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNCO010000001.1 Bifidobacterium longum strain BSD2780061688_150302_C8 NODE_1_length_522682_cov_66.3989, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 195148 36 100.0 36 .................................... TTACAAACCCTGAGGTTACAGTGGGAACTGTTTGAG 195076 36 100.0 35 .................................... CACGCTGGGCCGGACTAACCAGACGTAACGGGCGC 195005 36 100.0 37 .................................... ATTCGTCTGAAAAAACGAACTAGATTCATTCATGGCA 194932 36 100.0 36 .................................... GAATACGAAAGGCCCCGCGACCCGCAAATCATCGCC 194860 36 100.0 37 .................................... ACGCCCGGCAACCCGTCCGGCAAGTCAAGCGCGGCGA 194787 36 100.0 36 .................................... AAGGTGAAGAAGTCCCGTACCGGCAAGGCCGTCATG 194715 36 100.0 35 .................................... TGGCGACTGCGCCACGGGTATTCACAGGCTGAACT 194644 36 100.0 37 .................................... GAGCGAGTACCCATTTATCCAACTAGAGGCAGACGAA 194571 36 100.0 38 .................................... ATCGGATGAAGGATGATAAGAACCTGAATCTTGATGAC 194497 36 100.0 36 .................................... GACAACGACATAGACACCCTATACGACTTGACCAAA 194425 36 100.0 37 .................................... TTCGTCCAGCGTGTCGAATACGTCAACGCCCATTGCA 194352 36 100.0 35 .................................... ATGTTCGTCGTGAGCTTGACGATCTCGCCGTCCAG 194281 36 100.0 35 .................................... GATGAAATGCACGTCTTATATGGGGAGGGTACCAC 194210 36 100.0 35 .................................... GCCTGAGATGCACGCTGGAAAACACTCAACGGGTT 194139 36 100.0 36 .................................... ATCACATTGTTTCTGTTTCGCCAAACAGCTCACTAA 194067 36 100.0 36 .................................... TTGACTGGATATGTGATGTCTGCGGATAAAGTAATC 193995 36 100.0 35 .................................... ACGAGCCGCGAGGACCTCAGGGCCACCGTCGCCAA 193924 36 100.0 37 .................................... CTTCGTCAGATCGCTCGACTGGTCCGGGCGAGGATTC 193851 36 100.0 35 .................................... CAGTGGACGACCACGCGGGCCGCCAAATCACCCTT 193780 36 100.0 35 .................................... GGGCCTTCAACTTGTCGACCTCCTCCTGACGGGAC 193709 36 100.0 36 .................................... GCAGTTCGAGTTTCCGGCACGTGACAGGCAGTGTGA 193637 36 100.0 37 .................................... TCGAGCAGGTAGGGGCTGAGCTTGTCTCGGTGGTCTC 193564 36 100.0 37 .................................... CTATGGGGCGCTACTGGTGTCGGAAAAACCCGACATG 193491 36 100.0 35 .................................... ATTCAGGGCGTTGCCGCATTCGTCCGCGAAGTCGA 193420 36 100.0 37 .................................... GGAGTCCCGACCGTATGGTTGCAATTGGACTGAGATG 193347 36 100.0 36 .................................... TCCTCCATTCGGTCCATCTCGTCTTGCAGCAGTCTT 193275 36 100.0 38 .................................... GTTGATGATCTTCTGGTTCGCTCCGTCGCGCCCGCCAA 193201 36 100.0 36 .................................... ATGCTGGAAGGTAACGGCGTAGGGCATGGCAGAATC 193129 36 100.0 36 .................................... TGGGTGCCCTTGCGCCAACACTGTCTTTCGCGCAGC 193057 36 100.0 36 .................................... GACTACAGCAACGCAGAGACCGCCGAACTGAACACC 192985 36 100.0 35 .................................... GTTGGGAAAACCCACACGTTCGTCCCCGTTGGATA 192914 36 100.0 34 .................................... GCACAAAAAGCTGCCCCCTGCTCAGTGGCGGGAT 192844 36 100.0 37 .................................... CCGGACGTACTGGTGTTCTTCAATGAGACGGCGAGCG 192771 36 100.0 36 .................................... AAGCCCCACGGACGTGCCCCGCCATACTCAGGAGAA 192699 36 100.0 40 .................................... CCGCTCCGGCGGCCAGAGTGTTCGTGGCCCATGAATGGCG 192623 36 100.0 37 .................................... TCTGTCGAGTCGCATTCCGCCGATGACGCTGCGGACG 192550 36 100.0 38 .................................... GCCACAACATAGGGACAACCATAATGCGCGCGTTCGGG 192476 36 100.0 36 .................................... TCGGGAGAACCGTCATACACGGCCCAACTCGGCATA 192404 36 100.0 35 .................................... TCGACCTTGGTCTGGGAATTGGGCACTTCGACGTA 192333 36 100.0 35 .................................... TCGTCGGCGGTGGTCCAGATGCCCATCAGCGAGAA 192262 36 100.0 35 .................................... GAACGCGACTATCCCGCGACTCATTCCGAGGCCGG 192191 36 100.0 36 .................................... ATAATAGTAGGGCCATACACCTTATTAGTGCATGAC 192119 36 100.0 37 .................................... CCGTTACAGGGCGTATGGGGTGGCGTGAACAGGAGTA 192046 36 100.0 37 .................................... AAGCCACATCAGCCGAGAACAATGCGTATCCTTCTTC 191973 36 100.0 35 .................................... ATGTTGTCGAATCCACGTTTCTTTCTCTTGCGGTT 191902 36 100.0 37 .................................... GTTACCGGAATTGTCAAGGCGATACTTGGGCAACGCA 191829 36 100.0 36 .................................... AACCAGTTCATCGACATCCTCGTAAATCGTATCGGC 191757 36 100.0 35 .................................... TACGGTCACCAGTACCAAGTCACAGGGTATGAGTG 191686 36 100.0 35 .................................... TCATCGACCACGTAGTCAAGTCAAAGGACAACCGG 191615 36 100.0 37 .................................... TCGGTAATCCAGCAGCCGGATATGCCGACGAATCGGC 191542 36 100.0 35 .................................... GCGAGTGCGATGTGCATGTTCCCGTCGTTGTCGAG 191471 36 100.0 36 .................................... GGCGCGCGTCTGCACATGATTGTCGTCCCGCCCGGC 191399 36 100.0 35 .................................... CGCAACATCGGTCATACTTGGTTCTGTGTCCATCA 191328 36 100.0 37 .................................... CTCAATATCTGGACTCAGATATACGGCGCGCTGGGTA 191255 36 100.0 35 .................................... GACATGCCGTTGTATCGCATCCCGTTGGACGGTAT 191184 36 100.0 35 .................................... CATGAGATAGGCGTATTGCGATACAAAAAAGCCAA 191113 36 100.0 35 .................................... TTGGTGGGGGCTAGCTCGTCGTGGCATATGCTGAC 191042 36 97.2 0 ...................................G | ========== ====== ====== ====== ==================================== ======================================== ================== 58 36 100.0 36 CTTGCATACGTCAAAACGTATGCACTTCATTGAGGA # Left flank : GAAAATCCATACGGCTTATTTAAGGAATGTGATTTATTTTTTCGCGATATGCGATAGATGTTTGATAACTAAATAGTGGTACTAAGATAAGGGGGGTGCGGATGTTTTTTTTGACGGTCAGGCGGCCAGTCCAAGGTGTTTGCGGTATTGCACGGGGCTTATCCAGTCCAGTGACTTCTTGATCCTAGTCTCATTGTAGTGGGTCAGGTAGGTGTATTGCTTCAATGTTTGTTGGGCGGGTTCGGCAGTGTTTTTCCGCCCCTTACGCTTACGAAATCAACGGCTCGACGACGAACTGACATCCACGAAAACAGCAATAGCGCCTATTGTTTTTGCGAGATCTGAATCGCTCCTGAATGAGCTACTAGGCATTCGCAATGAGAATATAGCGGTTCTGTGGATCTGAGAATCGAGATTGCTATGTTAGAGGACGTAGCCGTCCTCCACCTCTCGCAGTTTTGTCGGGAAAACCTCCAGTGATACTATAAATTCGAGCCTGC # Right flank : AGTGTGAGGCATGAAAGAAAACTCTTACACTCTGGCCTTGCATATGATGTGACCTGGTTTTTTGTTCCGCATCTCCTATCAAGTGAGAGGAAATGCGGAACAAAAACCAGGTCACATCAATATCGATACACTTCCGTGTGAAGCTCGTCATAGTGGATTGCACGAAAAACAGGTAGGGGGCTTTCCGCCATCAACAGCGGAAAGCCCCCTATTCTTACGGTCTATCTGCCCTAATTAGAGTACCTCACTCCGCAGCAATCGCGGCCTTGAGCTCCTCGACCTTGTCGGTCTTTTCCCACGGGAACTCAACGTCTGTGCGGCCGAAGTGGCCGTACGCGGCGGTATTCAAGTAGATCGGGCGCTTCAGGTCGAGCTCGTCGATGATGGCGGCGGGGCGCAGGTCGAAGACCTTGCGTACGGCGGCGGCGATCTGGCCGCGCGTCACGCCTTGCTCGGTGCCGAAGGTCTCCACGTTGACGGATACCGGGTCGGCAACGCCA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGCATACGTCAAAACGTATGCACTTCATTGAGGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-3.90,-4.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //