Array 1 37836-37983 **** Predicted by CRISPRDetect 2.4 *** >NZ_BATL01000058.1 Vibrio azureus NBRC 104587, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 37836 28 100.0 32 ............................ AGTGATCGATTGGCACTATCATATGCAGTTTC 37896 28 100.0 32 ............................ ATGACGATGCTGATAATGATAGTCACATTGAA 37956 28 89.3 0 ....................T.....GT | ========== ====== ====== ====== ============================ ================================ ================== 3 28 96.4 32 CTGTACTGCCGCATAGGTAGCTAAGAAA # Left flank : TTCTTTAATGGTAAGTGACGGGCTGTTTGAATTGTCTGGTGTACTAGAAGTTCCTAAAACAGTGCGTGAACTGAGGTTTGTCCGTAACCAAAGTATTGGCAAAAGCTTTCGAGGTTCAAAGCTGCGACGAATGAAACGAAGTATTGCTAGAGCTTCAGCGTTAGGGCATGCATTAAAAATACCTCAGGCAAGAGAAGAGCGATCTATTGAACATTTTCACCGCGTTCCCATTTCTAGTGGTTCATCAGGGCAAACCTATTTTTTATTTACTCAAAAACAAGTGGTTAATGAACGTTCTGAGGCGAACTTTAGTAGTTATGGACTAGCAACTGCACAGGAGAGAAGGGGTACCGTGCCAGACCTAGATTTATAACCCTTTTTTGAAGAGTATTTTAATAATCATAAAATCAATGAGTTATGTTTGAACTAAATAAAAGGGTATTTTGGCGTTTTGTGATGTTATACACACGAAATCATAGAGTTAGATACTACAGTTATCA # Right flank : TATGTTAAAAAACCACTCAGGAATAACACCAGAAAAGACTGCCGAAAAGGTAGTTTATACGATATAAAAACCCTGGGATTTCTTGGGGTTTTATTTTTATAACAATACCTTGTGGCGGTGAGGAATGTAATTCTCTTTAAATCTGCTAGCAAAACAATCCATTAGCTAGAGAGTACAACTGATTGTATTTTAAACCTTAATTGAGAATTCGAGGCATTGTGATATGTATTATAAGGCTTTGGTGCGAACTCAGAGCCGTGTATATACTAATCAACAAGGTAAGGTTTAGTCATACTTTGTCAGCTTAGCTTAGTTAGATAATTTATGCCCAGAGGCTTCACAAGGTAGCACTTCGTAACGCAGAAGTACCCCAAAATGGTTTGGATTTTTACTCATTAATACTCTGTTAATATGCTTTTCCCATATTAAAACTAATTCTTCGTCAGGTGCATCTAAGAATGATTATATGAAATTAGCAAAATGATGATTTGAATGTAAAT # Questionable array : NO Score: 5.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTACTGCCGCATAGGTAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.17%AT] # Reference repeat match prediction: F [matched GTGTACTGCCGCATAGGCAGCTTAGAAA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.00,-1.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 1819-2456 **** Predicted by CRISPRDetect 2.4 *** >NZ_BATL01000090.1 Vibrio azureus NBRC 104587, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1819 28 100.0 33 ............................ TGGATATATTGAGAAATACACTAGAGCTGACAC 1880 28 100.0 33 ............................ CTGGTGCGGTGGTTCAATTACTCGCAATGAAGG 1941 28 100.0 33 ............................ CTTGATAGCGATTTTATATGCAGCCAAGTCGTT 2002 28 100.0 33 ............................ TGTGCAGTCTGCTGGTAAGGTTTTTGTTAATGA 2063 28 100.0 33 ............................ TTAGCTTTTCAACATCATGCGATGTACTAGGGA 2124 28 100.0 33 ............................ CAAAGACTCTAACCCTATGATCGAATCAATCTC 2185 28 100.0 33 ............................ CGGCCCAATGATCATAAGCGATACGCTTGAAGT 2246 28 100.0 33 ............................ CTGGTCCGAGGGCGAAAATTACGTCGCATATCC 2307 28 100.0 33 ............................ CATTGCTGATATCTGGGAATGGGACGACAAGAA 2368 28 92.9 32 ............C.T............. TGCGTTGTAATTTAATTTTATCAAGTCACGGT 2428 28 82.1 0 AC..........A.T............T | C [2450] ========== ====== ====== ====== ============================ ================================= ================== 11 28 97.7 33 GTCTTCCCCACGTACGTGGGGGTGTTTC # Left flank : TTTGCAGGAGTAACAAATGCTTTAATGTCGTTCATCTATTCTAGCGGACTGGGATTTTTAATTTGGTTCGGCCTTGTCTTTGCATTATTTTTCATTTGCGAAATGATTAAAAGTGCGAGAAGTCGTTCAGAAAGTGGGGAGTTATTGATCGTGAAGAACTTGAAACTCTTAGTTTCTTGGTATTGCTCTATAACGAAGAAGCAACGAAATATCATTTGGATTTCGGCGCTAATTATTTGTGCAATACCAATTGTAGGATGGATGTTTGTTACTCCTTGGCTAATACCGTTGATGTTGTTTTTAGAGTACAAGCGCTCCTAATGAGGCTTTGCTCATAAAAAATAAGAATAAGTGTCGCGCAGTCGACACTTTATCTGGGTGTTGGACAAGCTCGCCCTTTATTAAGTCAATTCAAATCTGTAGGTGTATGTAAAAATAGATTGAAAATGATTAACCACAATATATAGTGTTTTATTGATGCTCATTTTCAATATCTTGGT # Right flank : TCTAGAGAGCGAGATGAACCTTCCTTTTCTTGTGCTGTAAAAGTGGCGGAACGGCTTAAGAAAATCTTCAGTAATTTATTTTAAGTTGCGGGGGGCGTTCTGATTAAATAATTATTCAATTAATTCTGAGGTGAAAATAAATTATTAATTTATATAACAATGGCTTATTGGTGTTTTCATGATGTTTGTTAAGTTTATTTAATACGTTTCGCTGTATGTTTTGTAGCAGTGTATCGTTTGTTTTTATTGCCAATTGAACGGCCGATAGATAAATAAAGATACATTTTATCTAATAGTAAAGCGTACATACTGTTTGCAACCAATTTTTCCTTTTGAGGGGGTGAGTTCGTCAATGAGGCGCAGAAAAATAAATACATTATCGCAAGTGCCTTTAGTCCCCTACGCTGAATGTCCAGCAAAAACCTTTACTGATAAATATGGTCAAGTGTGTTTAGGTCGGAGTGTGTTTAATCATTGCCAAATTGTTGGACATATTGCTA # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGTACGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACGCACGTGGGGGTGTTTC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 11033-11611 **** Predicted by CRISPRDetect 2.4 *** >NZ_BATL01000090.1 Vibrio azureus NBRC 104587, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =================================== ================== 11033 28 100.0 33 ............................ CTGCGATGGTAAGATAGATGGCAAAGAGGCTTA 11094 28 100.0 33 ............................ TGAGAGAAAGCTCATTTCTGATACTAATGCGTT 11155 28 100.0 33 ............................ TGAGATCGACGGTCAAGAGCTTTTTGCACCCAA 11216 28 100.0 33 ............................ CCTTTTGCTTTTCGTTGTACCCGGCAAGGTCTG 11277 28 100.0 33 ............................ CTTCTGGGACGGCTCATATGGCGAGAAGTTTGA 11338 28 100.0 33 ............................ TGGGTACTTAATCAGAGCCGATCTCGCGGCTAA 11399 28 100.0 33 ............................ CTCTGCATAGCCTAGCTTCGCCAGCAGAGTATC 11460 28 100.0 33 ............................ TGTGTCTGATGCTAAGGTTTATCTGGGCATGGA 11521 28 100.0 35 ............................ CGTTATCCAGATCTATGATTGGAAAGACTTATTTT 11584 28 85.7 0 .........G.A.T............G. | ========== ====== ====== ====== ============================ =================================== ================== 10 28 98.6 33 GTCTTCCCCACGCACGTGGGGGTGTTTC # Left flank : TAAAGAAGAATTAACGATTGATCTTGCATTTTCGCTGACACGAAAAATGGCGGGGCAGTATGATAAATATGTCGTTTCCAATGCATTCAGAGAAAGGGTTATAGAAATGGATATACTCCAGCGTGTTGGTAGGGATATCAGCGAATTTATGGGTATAGAGGAATGTTAGTGGTGATTGCAAATGATTTGCCTCCTGCCGTTCGTGGCCGCATGAAACTTTGGTTTGTAGAAGCAAAGCCGAATGTTTTTGTTTCAGGCCTAAAAGATTCGGTTGCCAATAAGGTTGTAGATTATCTGTTCCAACACTGCCCATCTCAAGCTGGGTTGACGATATTCAAAAGTATAAATAAGCCTCCAGGGTATGAGATAAGGACATTGGGTGAAACCAAGAGGTCACTCATTAACCTCTCAGGCTTGTTTTTGGTTTCTGAAAAGACCGTTAGTTAATCATTAAACACATCATATGGTGTTTTACTTGTGCTCTTTTACAATATGTTGGT # Right flank : CTAAACATCACAACTTGCCAGATTTTAACTTTAAAATATAAAGCAGACGTGATTAACCCTCACGCTCAGCTTTCATTTTCTTAACTACACGCACAACCGTTCTGGCAGAGACGCCAATCATCTTGGCCGTTTCGTTGATGCTCATTTGGTTATCGACTCTTAACTTGTAGATTTTTTCATGCAGTTCTAGGTCAGGTTTCCTCCCTTTGTATTTCCCTTCGTTCATGGCCTTCTCGATGCCTTGCTTTTGGCGGCGGCGTCTATCTTCATAATCTTTTCTAGATATCGCGGCCAACATGTCCATCATCATGTTGTTGATGGCCTTGATCATCGAGTTGGTGAATTCATCAGAAATTTCTGGAGCCAGGGCAATATGACTGGTAGGTAAATCCAGGCTAATGACTTTCAATTCCTTCTTGTACAGCATTTCTTTTAATTTAGACCAACTAGCTTCATTTAAACGTGAAAGGCGGTCTATCTGCTCAATGATGATCACATCT # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGCACGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACGCACGTGGGGGTGTTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //