Array 1 2299613-2299916 **** Predicted by CRISPRDetect 2.4 *** >NC_023037.2 Paenibacillus polymyxa CR1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 2299613 32 100.0 37 ................................ GTTTGATCCTCGTACATTACACCGTCACCTCCATCGG 2299682 32 100.0 37 ................................ CATCTGCCCCAAGCACCGCCAGCCCGCCCGCTACGCC 2299751 32 100.0 34 ................................ ATCATCTGCGAACAAACATGTCGTACTTCGAACC 2299817 32 100.0 36 ................................ TTCACGACATAACCCTCACTTTACGAATTTTTTATA 2299885 32 96.9 0 .......................A........ | ========== ====== ====== ====== ================================ ===================================== ================== 5 32 99.4 36 GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : AGTTCCGTATTCGTGTGAATGTCATCTATCCGGGTGCCATTTCGACGAATATTGATGAAACCACGGAGAAATCGGAAGGGTTAAAGCAAATTACCATCCCCGTCAAGTTTCCCGAAGGAGGGCAACCGTTGGCTGATGGGCCGGGTCAACCCGAGCAGGTAGCTGATTTGGTAACATTTTTGGCCTCAGATCATTCGCGTCACATTACTGGTGCACAAATTGTAATTGATGGGGCAGAGTCGTTATTGTTTTAGAAAATAGAGCATGCTCTGGGACGGAGAAATGTTTTGTGGTATCCTGAGTGTATTGTCTTGGTTACGGTGCGAATGTGAAGCTCACATAAAAACCCCGGGTCCTTCGCACCTCGAAATTTGTCGAAATGGATTCGGATTAGCTTTCTTCGTTAGAAGTCAATAGTCGATTCAAGCTTTTTTGGCATCGTTTTTTTCGAAAATGCATGGAATTGATATCATTAGGGTATGAATTCCTTCATTTTCGCT # Right flank : TACATAGGGAGTAGGGGGAAGATGCTGTTAAGCCTCTCATCGCACTCTATATAAGCGTAGGATTGAGGGGTGAGCGAGGGACAGGAATGTAGGGGCATATTCTGCTTAGAATCAGTAAATGAAATTAGGCCGAATATATTTCAGTTTTACATCAGATCATATATCCTACATATATCGAGAATCTTCAGAGATAAACTTCTGGGGATTTTTTTGTTTCTGTGTAATTTAGTTCATATAATAAAAATTTATGATATTTTATTTATTTGAAATTAATTTGTTAATAAATACAAAACAAACATGATATAAATGGGTCTTAGCTAAGAAAGCGCATTTATAGTATTCATCGACAGAGAGGTAGAGATATTCGGTTGGTGAAGGGAAGTTGCGCGTATTATGGTGGTGAGAATGGCACCCAGCATTTTATTGGATTATTTGCTTAAGAAGTTCAAGGTATAATTCTAAAAAGCGGTAACTGACTTGTATGTGTCTCCTATACAGCA # Questionable array : NO Score: 9.03 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 2309327-2309808 **** Predicted by CRISPRDetect 2.4 *** >NC_023037.2 Paenibacillus polymyxa CR1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 2309327 33 100.0 35 ................................. TACATGACTTTTATAAAATCCAGATAATGCCTTCG 2309395 33 100.0 35 ................................. CTTTCGGTTGGTTGATCTGGCTGATCGAGGGGATA 2309463 33 100.0 33 ................................. TCTTCGCCAGCGGGTTAATCAATTGAGGAAAGA 2309529 33 100.0 33 ................................. AGCACCTGCCCGAAAGGACCGTGGCTATCTATA 2309595 33 100.0 34 ................................. ACTTATGGAGAGATCAGTCGTCTTTACTAAATTT 2309662 33 100.0 14 ................................. ATTGTTTGTCGTAT Deletion [2309709] 2309709 33 100.0 35 ................................. TCTTGATCTGGTTCGGGGTAGCTTGGGGAGTCATT 2309777 32 93.9 0 ..........A...-.................. | ========== ====== ====== ====== ================================= =================================== ================== 8 33 99.2 31 GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Left flank : TCCATTTTTGTGGAAGTAGGTGTGAACACTTGCTCATTTTGATCACGTATGATGTAAGTACAGTAGACAGAGAAGGTAGAAAAAGACTGGCAAAGGTTGCGAAAAAGTGCGTAGATCACGGACAAAGGGTGCAAAATTCTGTGTTTGAATGTATTTTGGACTCGACCCAGTTCCGCAGCTTAAAGTATGAACTCGAAGAATTAATAGACCCAAAAGAAGACAGCTTGCGCTTCTACAACTTAGGAGATAACTACAAGAAGAAAGTAGAGCATATAGGGGCAAAGGAAGCTTACGATATGGAAAGCCCACTAATTTTATAAGGTGCGAATGTGAAGCTCACATAAAAACCCCGGGTCCTTCGCACCTCGAAATTTGTCGAAAAGCATTAGAATGCTGTCTATGAGAAAAAGTCAATAGTTGATACAAGCCTTTTTGGCATCAGTTTTTGCGACAATGTGTGGAATTGATATCATTAGGGTATGAATTACTGCATTTTCGCT # Right flank : TTTCACAAGTACCGCTCCCATCGAAATGAATAGAAGACACGTTGCGGAATTGAATCGCACAAGGGTTCTGACCAGGCTGTTATTGTTTCCGTTGATTGACTGGTTCCTTGCCGTCTGCACGTGCCATAAAGCCCCGGAATAACTCGGGAAGTGCCTCTGGATATTGCTGAATTACAGGAGCTCTGCTGCGATCTGTTTGAGCACTGGCGGTGTTGGGATGAGTTGGCCGTCACCTTTGTTGCCCTTGATGTAGGCTTTATCCTCGTAGGCATAATATACATCGCCTTGGCCCTCAACGACCGGGTAGCCGCTCTCATCATCAGTTAAAGATGTTAGCACGTGATTGCCATGTTGTGCGGCGTGCTCCTCATCATGCAAGCGCAGGATGCCGTCCTTACTTAAAAATGCGAAACGTGGTTGTGTAGTAGACACAATCATGTCCTCCTGAAATGATTTTTTTGAGAAATCAAAAAGGCCGACACATTGGCCGACCTGATTCA # Questionable array : NO Score: 8.99 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:-0.22, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.80,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : NA // Array 3 2316293-2317199 **** Predicted by CRISPRDetect 2.4 *** >NC_023037.2 Paenibacillus polymyxa CR1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 2316293 32 100.0 37 ................................ CTTCTAGTTTTGCATCGGCTCAAACATTTTTTTTGGA 2316362 32 100.0 34 ................................ TTCAAGATTCACATGTAAGATGGGGCCGGAAAGT 2316428 32 100.0 34 ................................ TTGAAAACTGTGAAGGCTATTGAAGCTGTGAAGG 2316494 32 100.0 34 ................................ CTCTCCCTATTTTAGTGGGCTATATAATAGTAAT 2316560 32 100.0 35 ................................ TGCCAAGCAAACCAGCCGTCCTTCCATCCGTGTGC 2316627 32 100.0 38 ................................ CTTATAGAGACAATGCAGCCGAACGAGGTGAGGATTAA 2316697 32 100.0 34 ................................ CTACAAGCAATTATTACAGGATCAAAATAATTAG 2316763 32 100.0 36 ................................ TCCTGAACAGTGAGAACAAAACCCCAAGCGCGGATA 2316831 32 100.0 37 ................................ GTCTTACGATCGAAGAGGGCAAGACTCCGCGCTACAA 2316900 32 100.0 34 ................................ TGGCGCGTACGGTGCGGTGAACGACGCGGACGGT 2316966 32 100.0 37 ................................ CTCCTGAAGAATGGAGAAATACGCTGGTCTACAGGTT 2317035 32 100.0 34 ................................ CTTCAACGACAAAAAAGGCTCATACCGAATAATT 2317101 32 96.9 33 ...................T............ GTTTCTCTGCCATCTCTGCTTTTAAGAGTTTCG 2317166 32 90.6 0 .............................CGG | CA [2317192] ========== ====== ====== ====== ================================ ====================================== ================== 14 32 99.1 35 GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : GTAATGCAGCCGGTATGATGAACAGGATTAATAACTCAACTTTTGCCGAACGTTTTCATAAAATATTTTACAAATACCTTTATGATTTTCGAAAACATAAAGGTATTTTTCTGATCAATGTAGTGGATATTTCCGGATGTATTTACCCAAAGCCAGAACGTTCAGCTTTGGTGTTAACTGGTGGAACCCTGCTTTTAAAAGCGCTATCGATGAATAATATATTCGAATGTGCGCTTCCTCCTTCACAGGTGGCAGAACTGGCAGAGGTGAAATAAGTCCAGGCAGGTATTTGTTGCTAAGCCAAAAAGCGAGTCTGTCCAGGTGCGAATGTGAAGCTCACATGAATTCTCCGAGAGATTCGCACCTCAGATTTTGTCGAATTACATCGAATGTGAACAAGTTTTAAACGATCGCAAGAGGATAAGGTAATATTAGATGCGTTTTTGCCAAAATAACGCTATAATGTTACTTAAATAGGGGGCATTTGACCCATTTTCGCT # Right flank : GAGCAGCCGCCACTTGGTCGTACGAGTGGAGAGCGCCTCTTTATCCGAAATCATGAAGGGGTCCGTGAAGTGAGGAGCTGGAGATTTTACGTGGTTTGGAGGGAGACGGCGTTGGTTCAGTACAATTCCGTGTGGGATGATCTGATCTTACAGCAAAAAGATGATTTTTATTTCCATGGACGCCATAAGCGCCCGTCGTTAGATAACGTGAATGCCCTATTATCTTTTGCCTATACACTGTTGTCCAACGATATGAAATCCGCACTGGAAGCTGTCGGTCTGGATGCTTATGTAGGTTTTCTGCATAGAGATCGTCCAGGGCGAGCCTCATTGGCACTGGATGTGATGGAAGAGCTTCGAGGAGTATATGCCGACCGTTTTGTCCTTACATTGATTAACAAAAAATTGATTCATGGGAAAGGATTTTACAAAAAAGAAAACGGGGCTGTGATGATGGACGATGATACGAGGAAAATCGTATTGAAGGCATGGCAAGAACG # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 4 2318669-2319030 **** Predicted by CRISPRDetect 2.4 *** >NC_023037.2 Paenibacillus polymyxa CR1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 2318669 32 100.0 34 ................................ TCAGAAGCAACTTCTTCGTCCGTTTTATCCTCAA 2318735 32 100.0 35 ................................ CAACAATTCCGGCTCAAAATAGATAGCCTCTCTAA 2318802 32 100.0 34 ................................ TCGTGTATGCCGGATCATATCGCCTTTGCCTGCG 2318868 32 100.0 33 ................................ TTACCATCCGTCACAACGGTCGTAGGATTAAAA 2318933 32 100.0 34 ................................ GGTTGCCTATGGTATTAAGCGCTTGGTGATTGAA 2318999 32 87.5 0 ..........................G.T.TG | ========== ====== ====== ====== ================================ =================================== ================== 6 32 97.9 34 GTCGCACTCCATGTGAGTGCGTGGATTGAAAT # Left flank : TCCATTTTTGTGGAAGTAGGTGTGAACACTTGCTCATTTTGATCACGTATGATGTAAGTACAGTAGACAGAGAAGGTAGAAAAAGACTGGCAAAGGTTGCGAAAAAGTGCGTAGATCACGGACAAAGGGTGCAAAATTCTGTGTTTGAATGTATTTTGGACTCGACCCAGTTCCGCAGCTTAAAGTATGAACTCGAAGAATTAATAGACCCAAAAGAAGACAGCTTGCGCTTCTACAACTTAGGAGATAACTACAAGAAGAAAGTAGAGCATATAGGGGCAAAGGAAGCTTACGATATGGAAAGCCCACTAATTTTATAAGGTGCGAATGTGAAGCTCACATAAAAACCCCGGGTCCTTCGCACCTCGAAATTTGTCGAAAAGTATTAAAATTGCTATTTATCCGTAAAGTCAATAGTTGATCCAAGCTTATTTGACATCAGTTTTTGCGACAATGTGTAGAATTGATATCATTAGGGTATCAATTACTGCATTTTCGCT # Right flank : GAAAAAGAAGGCTTGTTTCGTGGCCTGCCCAGCAGTGAATAGGTGCAAATTTCTTCTTAACGGATTTCTTATTCGACAAATTCCCCCTTACTTTTATGCAACAATTAACTAACATTTACAATGGTTGAAGTATAAATTAAGGTGGGAGTTGCTGCTTATGAGAATTTCCATGAGTAAGTTTTTAAAGCGCTATGCAGCTATTTTGTTGGGCTACGCAATATGTATAGGGTTATTTTACGCTTTGGGATATAAGATGAGCGCAATGGGAATCTATGCAATTTTGACAGGAATTGTGACTGGAGAAATAATCAACTTCGTAATATCAAAGCGAGAGAAATGAACCTAGGTATCCCCTGATTGCATCAACATCAGGGGATTTTTCATTTAGTTAAAAGGTCCAAAAGAGTTTCTGCATGGGACCTCTTTATCATTTACTGGTGAGAATGCACATAGGGAAATGAATTAGTCATGTCAACATTGTGAAACCTTTTATTTGGAAC # Questionable array : NO Score: 9.16 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCATGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //