Array 1 19663-20212 **** Predicted by CRISPRDetect 2.4 *** >NZ_AXWT01000032.1 Deinococcus murrayi DSM 11303 H565DRAFT_scaffold00024.24_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 19663 37 100.0 35 ..................................... AGCCGCCGGTGGACGCCCTGCACAAGAATAGCCCC 19735 37 100.0 36 ..................................... CAGGGCCTTTATGAACTCCACCGGATTCTCTTTCTT 19808 37 100.0 35 ..................................... AACGACTCCTTGTTGGTGAAGGAGCGGAAGCCGTT 19880 37 100.0 36 ..................................... CCGTGAGTCCCCTGAAGGGGTGCGGTGCATGACAAC 19953 37 100.0 37 ..................................... CCTAAGGAGAAGATGGGGGTCTTACGCGTGCTACCCC 20027 37 100.0 40 ..................................... ATCAGGCTCCGGAAAAATGCGAGTGCGAGTCTGCCCGGAC 20104 37 100.0 35 ..................................... ACTGCCATACTCCAAGACGTTCATTAGCCCTGTAT 20176 37 97.3 0 ....................................T | ========== ====== ====== ====== ===================================== ======================================== ================== 8 37 99.7 36 GTTGCAGCCGTCCTTCGGGGCGGCTGAGGATTGAAAC # Left flank : CTGCACCGCTGAGGCCCCCGCCCATGATTGACCTGCTGATTTGCTACGACGTCAAAACGGACACCGAAGCCGGACGCCGCCGCCTGCGCCGGGTTGCCAAGGTCTGCGTAGCCCACGGCCAGCGCGTCCAAAACAGCGTCTTTGAGGTCAGCGTCACCGACGTGCAACTCCTGACCCTGCGGCAAAAACTCCTTGCGGAGATGGACCCCACCGAAGACAGCATCCGCCTCTACCGCCTGCGCCAGCCCCGCGACAAGTTTGTAGAAGCCCACGGCCTCGACCGCTACCGCGACTTTAGCGACCCATTGATACTGTAGTCTCAGCGCGAACCCCCCGTGACCATGAAAACCTGGGGGGGTTCGCGCAAAGAAAAAAGTCCCTCTGGGACGCGATTCATGACAATCGACCTGCCCGCCAAGGCCCCGCGACTGGACAACGTGGGGGGGGTTCGCGCAAACTGGTTCTGGGAAGCCGTCCTGGACGTATCCGGGAGGCAACCC # Right flank : TGGGGCGACTGAGCGCCGAGTGCCCACCAAAAGCAGGGGCCAGAGCCTCCACGTGGAAGCTCTGGCCCCTGGCAGGAAGAGTGCTTAGCGGTTGACGAAACGGCCACCGTGGCGGGCCATCGTGGCCTCCACGACATCGAGGGGAACGTCGTCCTCAATGGCGATGGCACGGCCTCCGGCATCAACGGCGCTCTGGATTTCGTTGTAGTGGGTGTCGTCAAGGTCGTAGCGGTCGTCGTAGCGGCGGGTTTCGCCCTGGGCGGCGACGCGGGTTTCCATACCGTCGCCGTGGACAGCGGCGTCCGCCGTGCCAGCCGCCGCGCCGATGCCCGACCCCAGGGCACCCATGCCCAGCAGCACGGGCACCGCCGCGAGGCCACCCGTCGCGGCGACCACAGCCCCCGCAGCTACGCCGGCCACCGCGCCCAGCGCCGTGCCCTTCAGCGCGCCGCCCGCCATATCCGCAGCGTCGCCGCCTCCGTCAACATACTCGGTGGTGG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAGCCGTCCTTCGGGGCGGCTGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-15.10,-9.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : NA // Array 1 232079-232229 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI519502.1 Deinococcus murrayi DSM 11303 H565DRAFT_scaffold00003.3, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 232079 29 100.0 32 ............................. GACGAGCGGGGGGAGGTCACGAAACGCGAGTA 232140 29 100.0 32 ............................. CTGCCCGCGCTTTTAAGCGGGCCTACGCGCCG 232201 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 3 29 100.0 32 GTTTTCCCCACGGGTGTGGGGATGGTCCG # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGTGTTCCCCACGGGCGTGGGGATGGTCCGCGGCGGTACATGCGCCAGCGCAGCCGGTAGAG # Right flank : GCCTCGACCGCCTGGCCGAGCGCCTGGGCGGGGGTGTTCCCCACGGGCGTGAAGCGACTTCCTCTCCTACCGGCCTTCTCGCGCGTCTTGTAGCAGCTCACCTGCCAAGCTGAGCGCTGCCGGACCAAGGGGGCTGACGGTGACACCCAGCAGGGTGCTCAGCTTGTCGCGGCGCGGGCCGCTGAGGTAGCTCCAGCGCTCCAGGTCAGCGCGGTGCAGCCGGGCGGCCTCGTCGCGCAGCAACCGCACCGCGCCGTCGTAATACCCGGCCTGAAATGCTGTGCGGGCACGCTTCTCGTGCTCGACCATGCCCAGGCCACGGGTAGCGAGCAGCACCCGGCGGGCTTCTGCCTCGCCGCCGAAGCCGTAGAGGCTATCAAGATGGTAGACCGCCTTGGGAAAGTGCAGGCCCGCCGCGGCCCGCCACGCGTGGGGCAGCCGCAGTGGGAACTCTGGCCAGCCGTGGATATGGGTCAGCAGCGCCGGGTACAGCAACTCGA # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCACGGGTGTGGGGATGGTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [28.3-25.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA // Array 1 107651-106707 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI519503.1 Deinococcus murrayi DSM 11303 H565DRAFT_scaffold00005.5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 107650 29 100.0 32 ............................. ACCCAGCCCGACACGCCCGCGACGGTGGCGGC 107589 29 100.0 32 ............................. TCATGGTGGCGGATGCTCACGGACGGGTCATC 107528 29 100.0 32 ............................. CGGGCGGAACTCTCGCCGCTGTCGGCGGTGTC 107467 29 100.0 32 ............................. AATCCGGCGACGGCCTGAACGCTCCCGATTGA 107406 29 100.0 32 ............................. GGGGCGCGTGTGGCGCATTCCCGCACCTGTCC 107345 29 100.0 32 ............................. GCTCCTGGGCGCAGGGGGGGAAATGTGGAAGT 107284 29 100.0 32 ............................. GACGCGCCCGGTCTCGCGTAGCTCGTTCTTGG 107223 29 100.0 32 ............................. GCTTGTTTCTTGCGGGCTGCCGTAGCGGATGC 107162 29 100.0 32 ............................. CTCGGCGGTTTGGATGTACCGCGCCAACGGTT 107101 29 100.0 32 ............................. TCCTCTAGCACGCTTTCGGTCACGCTCACGGC 107040 29 100.0 32 ............................. GCGGTGCTGGCTGCCGAAACCGCCGCCTACCG 106979 29 100.0 32 ............................. TAATACGGCGCGAGTCCAGTTCGCCTGAGCCA 106918 29 100.0 32 ............................. CCGCCCCCGGCCTGGAAGCCGCCACTGTCGAC 106857 29 100.0 32 ............................. CCGTGCCTACTCATGCCCTCGCCGTACCGGGG 106796 29 100.0 32 ............................. AACAACGATCACGCGCACATCATGGCCTACAA 106735 29 93.1 0 ...........................GC | ========== ====== ====== ====== ============================= ================================ ================== 16 29 99.6 32 GTTTTCCCCACGGGTGTGGGGATGGTCCG # Left flank : CGAGGAAGGCGGCGAACGCGAGTTCGCGGTGGCCACCAAAGCCTTCCTGGGCGAGGGGGGCCGGGTCACGGGCGTGCAGACCGTGCGCCTCGACTGGGAGGGCGGCCAGATGCGCGAAGTGCCCGGCAGCGAAGCCGTCATTCCCGCCGACCTCGTGCTGCTGGCAATGGGCTTTGTCAGCCCAGTCGGAAGCGTGCTGCAAGCCTTTGGCGTAGAGCGCGACGCCCGCGGCAACGCGAGCGCAGCCACCGCCGGAGAGCGCCGCTATGCGACCAATGTGCCCGGCGTCTTTGCCGCGGGCGACATGCGCCGGGGCCAATCCCTCGTCGTCTGGGCCATCCGCGAGGGCCGCGACGCCGCCCAGGCCGTCCACGAGTTCCTGATGGGCTAATCTGCGTGGGGAAGCACATTCCGGGCCGCATGAAAATGTAAGCTGATTCCAGCCGAGGGCTAGGGCCTTCGGCGGGGGCAAGCGGGGTTTGAGGCCGTGTTGCCAAAGT # Right flank : TGAACTGCGGTTACATCTGGATGGGCCATCCGCTAAGCTGACAGGCGGTTGTCCTCTCTTACGTCCCCACCCACTCTGCTCGCATTTACGGCGGAACACACTCGCCTGGTCCTGCCCTCACCCGGAGCGGGGGCAACCCTTCTCGTGAATGGGCATCCTGTTTCCCAGGCTGCCCTCACGCCCACCACGCCCTTCATCACCGCTCAAGCCGTGGACTGCACCACGGTCGACGTTCACGATTGGGTGGGACGCCTGCACTTTACGAGCACGGACGGTCGGGTAGACGCGACGACCTACGTATTTCCCGCCAAGCTCGCGCCCGCGCCTTGGGAAGCGTTTATGGCGCTCAGCCGGATAGTGGACAGCCTTCCCAACCTCACGGCTTCTCTAGGGTATCCCACCCACCTGGTTCCCAAAACGGAAGGATTGAGCGTGCAGCCCCTCACGCTCGCAGATGTTGAGGGTATTGCTCTGGGTGCCTGGCGGTTGACAGAAGTTTG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCACGGGTGTGGGGATGGTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,0.78 Confidence: LOW] # Array family : NA //