Array 1 799166-800934 **** Predicted by CRISPRDetect 2.4 *** >NZ_ARVU01000001.1 Cycloclasticus pugetii PS-1 CycpuDRAFT_chromosome1.1_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 799166 28 100.0 32 ............................ TTATAATTAATAACTAGATAATAACATATTTC 799226 28 100.0 32 ............................ ATTCGGGATATTAGACGGAAATAGGCTATACC 799286 28 100.0 33 ............................ CGATAAATCAATATTGTCCGACACCGAACTAGA 799347 28 100.0 32 ............................ AATCTATAAGCGGCTGAAGTTCGTATCTACAT 799407 28 100.0 32 ............................ ATCTGCTTCGTGGGGATTTTATGCGTCAGCGT 799467 28 100.0 32 ............................ ATTCCTGTACGCGACTCCACCCGATTCGTGAT 799527 28 100.0 32 ............................ TTCACACAACCCGATAGCAAAACTTGAAGAAT 799587 28 100.0 32 ............................ AGCGTTGCTAAACATGGGGAGCTAAAAACGGA 799647 28 100.0 32 ............................ TTAATCGTGCAAAAAATTAATTTATTATAAAA 799707 28 100.0 32 ............................ ATTAAATCAAGAGCTTAAACTTTGGACGTTGC 799767 28 100.0 32 ............................ TTTTTTAAAAACATCACATTTTCGGTTTTTTG 799827 28 100.0 32 ............................ GTTTAAATACAGCCCTTCGATACTAGCATTTT 799887 28 100.0 32 ............................ TTTGAGTAACGCCGATGATTGAAATGCCACGC 799947 28 96.4 32 ...........................T ATCGGCCGTTTCAAGCAGACCTTTACTCATAT 800007 28 100.0 32 ............................ TAACTATGAAGGTAGAATACCTGGCACTATCG 800067 28 100.0 32 ............................ ATTTTATGAGCAAGCATCTGAAATTATCACTA 800127 28 100.0 32 ............................ ATTAAGCGAGCGCTCATATCAACGCCGTCTAG 800187 28 100.0 32 ............................ TCTTAAGGGACAATCCCCACACACTGAAGAGT 800247 28 100.0 32 ............................ TCCCGTACTACATTGATGAAGACAAAGGTGAG 800307 28 100.0 32 ............................ ATCCATCACAGACACAATAATCTCAGAGTTAG 800367 28 100.0 32 ............................ GTCAATGTCAAATGTCGGCGCAGGTCAAACAG 800427 28 100.0 32 ............................ CTGACGGAGTTGGTTATTCAGGCATGAGCAAT 800487 28 100.0 32 ............................ TTGACGACGGTAAGCAGGGTCCACAGAATGAA 800547 28 100.0 32 ............................ TAATTTCATCATCACGAGTAGCTATCATATCT 800607 28 100.0 32 ............................ ACGGTGTCTATCTGGCCGAATTTACCTTTAAT 800667 28 96.4 32 ....T....................... ATGGGACGGCTCAGGTTGGGAGGCTGCTGCAT 800727 28 100.0 32 ............................ TTCTGAAGTTTCTAGGGTTTGGGGCTGGTTCA 800787 28 100.0 32 ............................ AACACGCGCCGAATGAATCCGGCAGGTTTTGA 800847 28 100.0 32 ............................ CAAAGATAATTACAAGCATGAAATCAACTAAA 800907 28 92.9 0 ..........................GG | ========== ====== ====== ====== ============================ ================================= ================== 30 28 99.5 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : GCTAGATAGTACTTCAAGTGGACATAAACATAGGCGTTATATTGCTTTTGGTGAGCTATTGAGCAACCCGTTGAAAGGAGATTTTGACTCGTTTGGCTTAAGCAAAACAGCCACTATTCCATGGTTTTAATCCAATGCCGAAAGCATTGCTATTATTTCAGGTAAAGATGGCTGGAGACTTAAATAAAATATTCTCCAAAATTTCTTTTATGCAACTTTTGTCGTTTTCTTAAGCGCAAGAAACTTAGGTTCTCTTAAAGTAATCGCTATAAGAGTATAAGGTGGCGTAATCTTAAATGAACTATTATCCGTATGATATTAAAGCAAGTATGGAAAATGTTTTTTATGCCCAAAAGGTAAGTATTTCCAACCAAATTTTTTTAGCTCCTTAAAAACATATAAATATCAATAAGTTAAAGGAAGGCGATTAATTAAAGGGTTGCTTGTTTAAATAGCAGCTAACTATTTGTTATTACTTGATTTTCTTGCTTTATACTCTT # Right flank : GCGATTTCCTCTGGGAGTGTTGTAGTGCTCACTACCTAATTGTTAGGTTTAGGGAAGAGAGTTTGTTTTTTCATTTTTTTGTGGAGGGTTATCTTATGGTCCGCTAAGCTACCCTTTGTTTAAGGCATAAAAAAAGAGCTAGTTTTTACACTAACTCTTTGATTATATTGGCTCCTCCGACTGGACTCGAACCAGTGACCCAATGATTAACAGTCATTTGCTCTACCAACTGAGCTACAGAGGAATTGATCAGGTCGCGTATCTTACGAAACGCGGCTGTTTTGGTCAATAGCTAATAAGCTTTAAAACACATTTAATTGTCGTTTAGTAACTTCGCTATTCGATCCATGGCGTTTACTAGGTTATCCATGCTGGTTGCAATGGATATACGCATGTGACCATTAAGCCCAAAAGCTGAGCCTGGAACAAGTGCGACGCCTGCTTTTTCAAGAATATATTCAGCTAAGTCTACATCGTTGTCGATGCTGTCCATGCGATTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //