Array 1 12214-13188 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJUW010000039.1 Anoxybacillus flavithermus strain WS5290 39_20257_46.1117, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 12214 30 100.0 38 .............................. TGTTTATGGTAAATATAGCTCTACAAAAATGGAGAAAT 12282 30 100.0 41 .............................. TTCTTTCGGCTCTCGGTGTTTATTTTGTTGTTCGCGTTCTC 12353 30 100.0 36 .............................. CCTGGAAAATTTGCTGAACCAGCCGCGGATCCAGCC 12419 30 100.0 37 .............................. ATCGCTTGCGTGGACTGGCTTCAGGTCACTTTCAAAA 12486 30 100.0 36 .............................. GCGGAAAAATGTGTACAAAACGTACAAGTTGGAGGT 12552 30 100.0 36 .............................. ACCGTTCTGTTCTTTCAGCTCGTGTTAGTGTTGATC 12618 30 100.0 37 .............................. TCGGTCAATGGCTGTATAATCAAGAAAAGGTCGCGAA 12685 30 100.0 39 .............................. AAAAGATAGGTAATGACTGTATTTTAGCTTGTGTGCCAC 12754 30 100.0 40 .............................. ACATTCATAGGGTTATTTTTTATCATTGCGTTAGATTTGA 12824 30 100.0 39 .............................. AGTCATCAGACACTAATACAGAGATGTTTGCACCAGTCA 12893 30 100.0 37 .............................. TGCATGCTCGTATGGGTGAGTATTAATAACGTTCAAG 12960 30 100.0 37 .............................. ATGTACAAGCGTTAAAATGGACACAAAAGGAAACGAA 13027 30 100.0 35 .............................. AAAAATGCGCATAGCCGGAAAGACTATACGCATTT 13092 30 100.0 37 .............................. TTCCGCTCACCAATCAGACTATGACTGTCGTTGACCC 13159 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ========================================= ================== 15 30 100.0 38 ATTTGTATCGTACCTATGAGGAATTGAAAC # Left flank : TATTGTTTGGCTTTTTTGAAACATATGTGAAATTATCAGACGAAGAAGAACGAAGACTGCGAAGCGAGGTGAATGAAATGGAGACGAAAGAAAAAGAACAAGTGATGGAGTTGATTATTTCGTATGAACAAAAGGCGTTGGAAAAGGGAAGAGAAGAAGGGATAGAACAAGGAATCAAACAAGGAATCAAACAAGGGATGAAGCACCTTGTACAAACGATGGCCAAAAAAGGGATGAGTGTAGAAGATATCGCAAACATCACAGACCTTGCGGAAGATGAAGTGCGTGAGTTGTTAGAAAAGGAATAAGTAATTTGCGCATAATTTCACAACCGTCGTCGACCTCCAATCTTGCAAAAACCCCAGGGGATCGACGACAATTTGTTTTTTGCAACTTTTTTAGACGTATCAACGCATCAAGACGATTGACAGAATTTTCGAATGTATGTATAATGACATTGTATAGCTTTTCCAAGTATTGATTTATCAGCACTTTTTGGG # Right flank : CACCTTTGTAAAAATTCTTCAATTACTTGAGCTTTTTCGTTTGGTTTGTATCGTACCTACAAGAACCAGTATGTTAGGGTCTGGATTTTTTTGTATATACCATTTTACTTTTTCTTTAACATTTGTTATAATATAAGGTAGAGAACATCTTTCTTTCCGATTATGGTAAAGTGAGATGTTTTTTTCGTGGAAATATTGATTTCACAAAGAAATGGAGGGATTTCTGATGAAGAAATACGCCATTGTGTATTGTGAACATCAATTTGGTTCCATGGATGGAAAAACAGCGAATGGGCTTGTGCGCGATTCAGGGCTGTATGAGATCGTTGCAGTCATTGATTCGACAAAAGCTGGTCAAGATGCCGGAGAGGTGCTTGATCAAAAGAAAAATGGCATTCCGATTTGTAAAAACCTTCAAGATGCAATAGCCTCCGCAAAAGAAAAACCGAACTACTTCATCTTAGGAATTGCTCCAGCGAACGCTTTTCTCAAAAAAGAAG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTGTATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 13509-12944 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJUW010000057.1 Anoxybacillus flavithermus strain WS5290 57_13549_58.7857, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 13508 36 100.0 30 .................................... ATTGTTACTAGGAGTACGATTACCCATATA 13442 36 100.0 30 .................................... TGAGGCATAAATATCCCGACGTTGTCATTG 13376 36 100.0 31 .................................... TTAACTAATTCTGTGTATGATTTAAATGTTA 13309 36 100.0 30 .................................... TAAAGAAGTTAAAAGTACATTTGAAGGTGA 13243 36 100.0 30 .................................... TCAGTTGCGTAAAAATGATGTAGAGAAATT 13177 36 100.0 30 .................................... TTTAAATTTATAATTAAATTATTTCATCCA 13111 36 100.0 30 .................................... AAAAATAGGCGAGTGCATGACCAGATGCAA 13045 36 100.0 30 .................................... CTTTGTATAGCGCGTTCTTTTGCAGTTTTG 12979 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 9 36 100.0 30 GTCATAGTTCCCCTGAGGTTATTGCTGTGGTATGAT # Left flank : AAGTGGTATGATCTGTATTGTCATAAACGCCCGAATAGAG # Right flank : ACGTGCATCAAAAAGCCTGTAATATGAACGATTACAGGCTTTTTGATCGTTTTAAAAAAAACGTGAGAAGGGGAGAAGAGTTATCCTTCATCCGTTTTTTTAAAAAAGTGACAGTTGCGTTGTTGTAATTGTTTTTTCCTTGGTAGTAGGTTCTCCTAAGAGAAATTGCATTTTTGCATATTGTTTTTCCGTTACGATCATCGCCCGCACTGATCCTTTCGGTGGCAAGTTTCTTTTCAGCCTATTAAGATGTTTATCAGCAGATTCATGCCCATTGCAAATCCGACTATATACGGAAAACTGTAACATATCATATCCTTCGTTCAATAAAAATGCACGAAATTTTCTGTAGTGCCGTTTCTCCCGATTAGTGATGACAGGTAAATCAAAAAACACAAGTAATCTCATAAACTTACTCATAGGTGTGTATTTGAATAGGAAGAAGTTCCGGCAATTTTAAAAACGAAGGTTTTTCGTTTCGACTAGCTGTTACGAAGCTC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCATAGTTCCCCTGAGGTTATTGCTGTGGTATGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.20,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA // Array 1 8475-6953 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJUW010000021.1 Anoxybacillus flavithermus strain WS5290 21_33404_40.6488, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 8474 30 100.0 38 .............................. GTTCTTCGTTAAGCATATATGCGGCTTTTACGTCTGTT 8406 30 100.0 36 .............................. TACAAAGAGATGCTAAATATTTAGTATCTCTTTATT 8340 30 100.0 36 .............................. GAAGAATGCCGCAACAAAAAAGAGATAAAAGGACAT 8274 30 100.0 38 .............................. CGATGTCGGGGCTCTGTGCGTTTATCATTGGTCAATGG 8206 30 100.0 38 .............................. TGATGACAAAAGGTAAAAGGAGTGACGACGAATGGCAC 8138 30 100.0 40 .............................. TTTGTTAGCCTGGCATAGCTAGGCTTATAGGTGGTGATTT 8068 30 100.0 36 .............................. ATTTCCTGCTCGAAGGCGAGAGTAAAAAATCGTTCA 8002 30 100.0 39 .............................. CCTGAAAAATTTACGGAGCCGGCTGCGGATCCAAGTGCG 7933 30 100.0 38 .............................. GATGAGCAAAAGATTGACGACATATTTAGTCAGTTTAT 7865 30 100.0 36 .............................. GGAAGTCAATAAAATCGGTTGATTTGGCGTTTGACT 7799 30 100.0 39 .............................. TCCTTCCAGCGACAAAGAGGTTATTTACTCCAATTTCGA 7730 30 100.0 39 .............................. TTGTAGTTCCGAATCAGCAATAACTTTAAAACTACCATC 7661 30 100.0 37 .............................. TACTCCTCCTTTTAAATTAAATGTTGTTTGTTTTATG 7594 30 100.0 37 .............................. CTTATATAAATCCGTTTTCGGACAATTTTCTTTTAAA 7527 30 100.0 38 .............................. AATAAACATTTTCTTGAATAGGGAGCCAATTTGCAAAA 7459 30 100.0 37 .............................. CCGCATGATGTTTATGTAAGGGAGGGATTACGATGAA 7392 30 100.0 39 .............................. TAACGGCTGAAATGTTGAAGCCTGTTACTGATACGATCA 7323 30 100.0 39 .............................. ATGAGTACGGTCTAACGATGTATTGCGGGAAGCAGGGTG 7254 30 100.0 41 .............................. TGAGAACGGAGTAATTGACTATATTAAATCTATTTCATCAA 7183 30 100.0 37 .............................. TATTACAACTGTCTCTTCTTCTGTATATCTTTGTTTT 7116 30 100.0 35 .............................. TCTTCTCAAACTCTTCTATGATTTCTTGACGCTTC 7051 30 100.0 39 .............................. CCCACAGCGTAAGGGTTGTTGTTAATCTCAACGAATCGA 6982 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ========================================= ================== 23 30 100.0 38 GTTTGTATCGTACCTATGAGGAATTGAAAC # Left flank : ACGTTGGATGGAAAGAAAAAAACACAGTTTTTTGATCCGGACGACGAAGTGTTTTCACATTTAATAGAACGGAATTTTTATAACAAATATGAAGCATATTACGGTGTTCCACCAAGCGATCGGCTACTCATCGAACCTGTCGATGTTCGAAAATGCGATCGGGTCGTAACGAGCTTTAAAGGCTTTTACATTACAGCGTGGAAAGGGCGGTATAAGCTCATTTCTTCTCCGGAAAATTTAACGTTTTTGTACCGTGTAGGTATCGGTGGACGAAACTCACAAGGATTCGGCATGTTCCGCATCATAAAAGAAAAGTGAAACATTTCACAGCTGTCGTCGACCTCCAATCGTGCAAAAACCCCGGGGGATCGACGACAGTTTATTTTATGCGAATTTTTTAGTGATATCAATAAATACAGAGTATTGACTGAATTTTCGGATGGATATATAATAGAGTTGTATAGCTTTTCCATATGTTGATTTATCAACGCTTTTTTGGG # Right flank : TCGTATTGGTCACTAGTCAGCGCTTCTACAGTAAAAAGTTTGTATAGTACTTAGTTAGTTTGACGTTGGCGGTATTGTGCTTGTCCCTCTTCACTTTCTATATACATCCAAATTGGCATTTTAACCTCTGATTTACGCAGCACACCCGATGCGGCGTAACACCTCATCTGGGTGCTGTAAGACGTGCTGTTCAAAGCGAGTAATGGATTGGGCAATGTCATTTTGATCCTTGTGAAAAACGTTGGCAATCACTTCATCTTTCAACCATTTCCACAGCCATTCAATCGGATTTAACTGTGGAGAATACGGTGGCAAAAAGATGAAATGAAAAGCATCGCCTTCCTCGCCATCAAGAAAGGCTTGCACCATCTTGGCATGATGAATACGCGCATTGTTCAACACAAGCACGAGGAATCGGTCCGTATATTTCTCTTTCAATCGGTGCAAAAAGTCGAGGAACGTTTCGGCATTGGCGGATGATGCGCGATGAAATACCACAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 18976-17464 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJUW010000021.1 Anoxybacillus flavithermus strain WS5290 21_33404_40.6488, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 18975 30 100.0 39 .............................. TGTTGCTTCGTTTGTAAATAAGCGTATTGATGGCATTTA 18906 30 100.0 39 .............................. CGCGAAGCCCGAGCAGCGGCTTTGGGCGAAGTTTTTCAC 18837 30 100.0 35 .............................. AAAATATGCTTCGGTCGGGCTTCTATCCATCGGGC 18772 30 100.0 37 .............................. TCATTGGTCAATGGCTTTATAATCAAGAGAGGGAGGT 18705 30 100.0 37 .............................. CAAAATTGCGTTGTCGTTCCGTTCGGTAGTCGGGACT 18638 30 100.0 36 .............................. CAAGTACAATCGGAGAAAGCCCATGCAGAGCGTAGC 18572 30 100.0 40 .............................. TTTTTAGAAAAGCGAATGTTGTTTTGACTGTTTTTATAAC 18502 30 100.0 37 .............................. TTGTGTGCCTTCCCGCTACCGCGGTAGCGGGCGGGAG 18435 30 100.0 39 .............................. AGAAGAAAGTCAAACCTGTGCGTCAAGCAGGTACGCACA 18366 30 100.0 40 .............................. AGTAGCGCGTCATCGACCATGATGACTCCGTTTTTTACAA 18296 30 100.0 35 .............................. TCACATTCATCGTTCACTTCTGTTGATTGCGGAAA 18231 30 100.0 40 .............................. TTGATCAGCCGGACAGAAAAAATAAATTGCGTCGTCTTTG 18161 30 100.0 38 .............................. TATAGCCTCTTTTTTTCGCTTGGTGTTTTGGCTCTTTT 18093 30 100.0 38 .............................. TTCCATACTCAACACCCTTTCTTTCCTTGTTGAGTATA 18025 30 100.0 37 .............................. GTGACGAGGAATTCACAGAGCGAATGAGGGAAACAAA 17958 30 100.0 37 .............................. GTGACGAGGAATTCACAGAGCGAATGAGGGAAACAAA 17891 30 100.0 36 .............................. AAATTTTCAAGTATTTGTAATGTGTGATTCATTTTG 17825 30 100.0 35 .............................. TCGTTTCTCAATATCCTCGCTCCTGTCTAGCGTGA 17760 30 100.0 37 .............................. TAAGCTTCACGTGTTTTCATGTGAATCGCTCCTCTTG 17693 30 100.0 38 .............................. CTTGACGGTGAAAGTAAAAAATCGTTCAAACATGACGA 17625 30 100.0 35 .............................. TGAATAAGTGGATAACATCATCGTCACTCTCAAGT 17560 30 100.0 37 .............................. ACGACATTTGTTCAACTTTTTCATACCATATTTACAA 17493 30 80.0 0 ......................G..TGCCA | ========== ====== ====== ====== ============================== ======================================== ================== 23 30 99.1 37 GTTTGTATCGTACCTATGAGGAATTGAAAC # Left flank : GATGCTATGGATGACATTTATCCTTTACTTGTCCGCTTGTTTCCGATGAAAAAAATAAAGGACAATCAAGTCGATGAATTTGCTCGCTATTTAATCATTAACTACCATTTTGGAGTTCATATTATTCATCGTGATTATGTAAGAATATGCTATGAAATTCGCTCTAGAGATCGTCTTGTTTGGGTAAATATAGAAAACAAAAATAAGAATTCATGCACATATGTACAAGGTGATTTGAATTTATTTGACGAAGTGTACCATATTTATATTGAATTTGAACGTATCATAAGTAAAGTACTGTAAAATCTACTTATTGTGAATTTATTCACAACTGTCGTCGACCTCCAATCGTGCAAAAACCCCGGGGGATCGACGACAGTTTATTTTATGCGAATTTTTTAGTGATATCAATAAATACAGAGTATTGACTGAATTTTCGGATGGATATATAATAGAGTTGTATAGCTTTTCCATATGTTGATTTATCAACGCTTTTTTGG # Right flank : TTGTGATCAGTTTTATATTTACTTTGTAATGTTTTGTGTTAGGGGTAGTTTCCTTAATTTCCTACTAATCCTTTTTATTTTTTAGAGCGCTGGTCAGCTATCCTCAACCTCTGTTTTTATGTTACTTATTTCAAAGAGTTATATTAATTTAGAAGGAATATATTCCTTTTATGTCGTATTTTATGGTAGGTTAGTTTATTTAGAAACGAGGTGTGATTTTGCTAGCAGAAGCAGTTGTTCGAGTAGGCGAGTCGCTTGTGAGTAGTGATTTACCTTTAACGGAGCGTATTCGTTTGTTAACGGATGTAGATAATGAAGCTTGCAAGAATTTTTTTGAGCACGTCTGGGTTGTGGAATGCATAGAGGAACAAGTGAACGTTCGTTTGATGAGAATAGGAGAAAAGGTGAAGGAAGGTAAAAAAGAAACGTTTGTTGTTGATAGAGCTAAAAACGTTGCCTTTCCTATCATTTATCCTAATGGTGGGAATCCGCTAAATGCC # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.41 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 3 33356-32717 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJUW010000021.1 Anoxybacillus flavithermus strain WS5290 21_33404_40.6488, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 33355 30 100.0 37 .............................. TCGACTATGTCATTCGCAAAATTCCAGGACTATCATA 33288 30 100.0 38 .............................. CCGTAAATCTCCTTCACGGCTGTTCTAACGTTTTTTAT 33220 30 100.0 41 .............................. ACATACTACATCCTCCTTGATTTCGATGGTTGCGTCCGCGA 33149 30 100.0 38 .............................. TGTCTGGTATGGTTCGTATAAATACGCGGATCAGTAAG 33081 30 100.0 38 .............................. CCGTAAATCTCCTTCACGGCTGTTCTAACGTTTTTTAT 33013 30 100.0 38 .............................. TAGACAGCTACAAAGGTAAATTTATCACTGTATTTAGT 32945 30 100.0 39 .............................. TAATTAAGGAGGTGCACTTACGTTAAGAAAAAGTTTCTT 32876 30 100.0 36 .............................. TCCGTTGCCCAACTTTCTGAACCATCACTTTTTACG 32810 30 93.3 34 ..C..........................T AATGGAATCACAATGTTGCCTCCTGCTAGATAAA 32746 30 80.0 0 A.......................A.CGTT | ========== ====== ====== ====== ============================== ========================================= ================== 10 30 97.3 38 GTTTGTATCGTACCTATGAGGAATTGAAAC # Left flank : AATTGAAACTTGTATGCCTCGTCAAAGCCGATTTGCTCCTTTTTGGAT # Right flank : TTTTGTATTGAAAAGCAGGGATGTTTATGCCCTGCTTTTATTTTTTTGTTACAACTTTCAGAAAAGTATTGCGCAAAAACTAGTTCGTTTGTATCATCAGTAATATGAGGATATTTTTTGAAAAGGTGGATAAGGGATGAAACTACTAACATTTCTCGGCGCGAATGACTATCGTGAAACAACGTATCGTTTTCGGGAGCGTGTGCATACGGCAAAGTTTTTTCTATCTGTCCTTATTCAAGAACTGCAACCAGGTGAAATATACGTATTTATGACAGATGGGGCACGAGAGAAAAACGAAGCACCGTTGCTTGACGAATTAAACCGATACGGCGTAGATGAAAAGAAAGTGCATGCTGTATGCATTCCCGATGGGCAAACAGAAGAAGATTTATGGAATATTTTTTCTGTTATTGCTGATCATGTGTATGAACATGATGAAATCGTCCTTGATATTACGCACGGATTTCGGACGTTGCCGCTCGTTGGAACAATTAGTT # Questionable array : NO Score: 9.12 # Score Detail : 1:0, 2:3, 3:3, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,9.41 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 706-66 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJUW010000059.1 Anoxybacillus flavithermus strain WS5290 59_13252_65.7819, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 705 30 100.0 37 .............................. ACATCTCGCTCATTCTTGCGTTACGACGCTTTACTCC 638 30 100.0 37 .............................. TAGTCAATACTTTTTTTTATCAATCATTCCACCATTC 571 30 100.0 36 .............................. GGAACAGAACCAGGAACGGAGCCAGGAACGGAGCCA 505 30 100.0 36 .............................. CATTCGGAACGGCTGGGAGGAGGTGAGCAAAAATGA 439 30 100.0 38 .............................. AGAAATAAGGAGGATCAATAAGAATGGAGGGTACAAAA 371 30 100.0 40 .............................. ACATGACGCACATAACAGGGAGTTGAGGACATGGAAAGAC 301 30 100.0 38 .............................. ATGCAAAGGGCGTACAATATAATTTTTCATTCGGAAAC 233 30 100.0 39 .............................. TGTATTGAATGTGAATGGTGAGTCATACGAGATTGTAAA 164 30 100.0 39 .............................. TGTATTGAATGTGAATGGTGAGTCATACGAGATTGTAAA 95 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 10 30 100.0 38 GTTTGTATCGTACCTATGAGGAATTGAAAC # Left flank : GAAGCGATCGATGCAACAAAGCGCCCGCTCGTAATCGGAGGTGTATTCGTACTTATGCTTTCATCGATCATTTTCTCCCACCGCGCCAACACATATTTGCGCAAATTAGACAATGAACAGTAAATTCCCCTGTTTTCGTACAAAGAAAAAACATGTAAAATAAAAGAAAATGGGTAAAGGGGGAATAAACGATGATGTGGATGATTACAGGTCTAGTCATTACAGCTGTTATCGGTTTCGTTATTATCGCGGAAGTGAACGCCGAAGCATAAAACAGTCTCTAAACAGGAGACTGTTTTTAATAAAATTTATTTGTGATAAACTTCACAACCGTCGTCGACCTCCAATCGTGCAAAAACTCCGGGGGATCGACGACAGTTTATTTTATGCGAATTTTTTAGCTGTATCAACGGACATAGACTATTGACTGAATTTTCAAATGTATGTATAATGATGTTGTATAGCTTTTCCATGTGTTGATATATCAACGCTTTTTTGGG # Right flank : CACTTTGTTAAATAGTCTTGCGGTGAAATATGATTCTGCGTTTTTAGTTTGTATCGTACCTATGAA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //