Array 1 28340-29167 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_WIVG01000009.1 Lactococcus garvieae strain EP01 Scaffold9, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
     28340	    36	 100.0	    30	....................................	ATCTGAAAGGTTGTTATAAGTGGATTTATA	
     28406	    36	 100.0	    30	....................................	CTTAACCTGTTGCTAAAGAGGTGATTGCAT	
     28472	    36	 100.0	    30	....................................	CGATGCTGATATATATATCAACATCGATAA	
     28538	    36	 100.0	    30	....................................	ATTTAAAAAAGGTGTTTTAAATCCAACTCA	
     28604	    36	 100.0	    30	....................................	ACAAGGTATAACAACTATGGTTATCCGATA	
     28670	    36	 100.0	    30	....................................	GCAACACCAACAAGTTATAAGAGAGATAAA	
     28736	    36	 100.0	    30	....................................	AAACGCGATGAAGATATTAAGTTATTGACA	
     28802	    36	 100.0	    30	....................................	ACTAAGACAGCGTTACTCTACTACATTAGT	
     28868	    36	 100.0	    30	....................................	CGGCACAATTGTTAAAAGTTTCATGGACGG	
     28934	    36	 100.0	    30	....................................	GGAAGTGACTGGGATTAAAACGGAGGCCGA	
     29000	    36	 100.0	    30	....................................	ATTTCTATCTCAATCTTGTTCTTGCTTCCG	
     29066	    36	  91.7	    30	..........T..............A.........T	TCTCAAAAGCAGCACTCTGCGTCATTCCGT	
     29132	    36	  80.6	     0	....................CA....AAGA....G.	|                             	
==========	======	======	======	====================================	==============================	==================
        13	    36	  97.9	    30	GTTTTAGAGTCGTGTTAAATTGAATGGTTCTCAAAC	                              	       

# Left flank :   GATATGAATGAAAAAACGGTTATTGAAGCGACCTATGGTCAAACGGTTGAATATTTCAATCGTCAGATTTTTGAAGATTTAGATATTGAGCTAGATATTTCTTATAACTATAAAGTTGAAGAACTGTTCAAATTTTTGAAGATTAGAATCAAAGATGAAACAAGTTCTATTTTTGAACGTACGCAGTTGATTTTGAATGTTTTGAAGGAATTTAACCACCAGGGTTTGATTATTTTTTATGGTCTGGGCCAACTTATGCCTGCCTTGGATTATCAGTTGATTATTGAAACGGCGAATTTGAACCAGCAAACGGTGTTATTTTTAGACAGTGAAGAAGTAGAAGAACTTAAAAATTTGAAGCGAGTTGTCGTTGATGAAGACTATTTTGTTGTGGAAAATATGATATAATTAAGGTAGATAAATACGATTGAACCATTAATTTTGAAGGCAGTCGTCCGCCGAACGACAATGATCTAAAATTTCAATTATGAAAATTTGAG
# Right flank :  CTCTTGCTTGGTCTTTTTTTGTGAGTCAAGCACTTTTTCTTGCGTATTGTGACTGAAAGCAGTCGCCTTTTTACTTTTATAGCAATTTATTTTTGTAATCAGACAGGTAAAAAAAGTTTCCTAATACTAGGAAATAAAAATAGAAGATAGCGCCAACATATCGTGCTAGAATGAAATCATCAAAGAAATACTTTCATAAGCTGAGAATACCTATAAAAAGCTGCTGCTCTTTGCCTCTGAGATAAGATTTTCGAGTGTGAGGAGCGTTGATATCAGGCCGGAAATTTGAACTAAAGTGACAAAGTATGAGTTTTTAGAAGTGCTCTCAGGGATTAGTGAAAGGAAAAAGGAGAAATCATATGACGAAACAAATCCTCTTAACATGTGGTGCTGGCGCATCATCGGGTTTTATGGCAGCAGCAGCTCGAAAGGCCGCTAAAAAGCTGGGTGCAGACGTTGAAGTTAAAGCAAAAAGTGAAACTGAAGTTGCATCGCTTCTT

# Questionable array : NO	 Score: 3.16
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGTCGTGTTAAATTGAATGGTTCTCAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:66.67%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-3.10,0.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-10] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [63.3-61.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.78,0   Confidence: HIGH] 

# Array family : NA
//