Array 1 44158-45955 **** Predicted by CRISPRDetect 2.4 *** >NZ_PVOJ01000048.1 Escherichia coli strain KG-4 NODE_28_length_52751_cov_8.43366_ID_55, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 44158 29 100.0 32 ............................. CCTCCCCGCTCACGCCAACGTTAAACGTTATC 44219 29 100.0 32 ............................. ATCCCCCGGTTATTGACCCCAAAACTGGTGAG 44280 29 100.0 32 ............................. ACTCAGTCAGCGCGTTAACCCCTTCACACGAC 44341 29 100.0 32 ............................. GAACGGCGGCTATACGGATTCGACAGGTCAGC 44402 29 100.0 32 ............................. TAACCCGGATAACTGGCAGAGTGCGAATAAAC 44463 29 100.0 32 ............................. CGGCTTGTTTAATTGCGTGGAACGTCTCAATT 44524 29 96.6 32 ............................T AGATCGCGCCACGAGGAAACGAATATGAACGG 44585 29 100.0 32 ............................. GTCTGTGATGGCCTGCTCGTGAGTCCGCGGCG 44646 29 100.0 32 ............................. AATTTTTTATCCTCATAAACAGCCTCAGAAAA 44707 29 100.0 32 ............................. AGTTACGTCGCCATCGATATTAACGGAACACC 44768 29 100.0 32 ............................. CCGGAGATCATCATATTCTGATACGTTCCGGT 44829 29 100.0 32 ............................. CGTTATTTACTGCTTTTTCATCCGCTCTGCTG 44890 29 100.0 32 ............................. ACTCCGATAGCCTGCTCAGAATTAAGGCGCAG 44951 29 100.0 32 ............................. CCGCCGATTTCCCTGGCGTCAAAAGCGGTGAG 45012 29 100.0 32 ............................. CTCTTTCTCAGTCATCTGGCGCTCAACGCCGG 45073 29 100.0 32 ............................. GCAGCAATTGCCGGAGTTTTACTAATTGCCTC 45134 29 100.0 32 ............................. TTTTGATTTCATTAACGGCGCTCCCCATATTT 45195 29 100.0 32 ............................. TGCGCCGTAGCGTGTCCACCTATTGTAGTAAA 45256 29 100.0 32 ............................. GCACCACGCGTACCCCGATGTTTGTTTTGCCA 45317 29 100.0 32 ............................. ATCCGGCTATATCTTTGAGCATTACAGAAATA 45378 29 100.0 32 ............................. CTATTGCTTTCGTACAGATTTTCAGTGGTGCT 45439 29 100.0 32 ............................. GGGGTAGAATTATTCTTCGTGAGCGATTTATC 45500 29 100.0 32 ............................. CGTTCTGAATCCGATATTCTTCAGCACCTTCA 45561 29 100.0 32 ............................. AGCGTCAATCAGCGCGTCTATCGCGTCACTTT 45622 29 100.0 32 ............................. ATGTAGGGGCAATCGAACGATTCTCTGCCGAC 45683 29 100.0 32 ............................. CCGAGCCCGATTATCGGCATGAGCGATGCGGA 45744 29 96.6 32 ............G................ TCGAAGAAGAAAGGGAAATAATGCGAGGAACG 45805 29 100.0 32 ............................. TATTACGCGCCAGCAATGCTGACAGCGGCAAA 45866 29 100.0 32 ............................. CGCGAGAGCCAGCAAAACGCCAGGGCACAAAA 45927 29 93.1 0 .A..........................A | ========== ====== ====== ====== ============================= ================================ ================== 30 29 99.5 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGGATGAACTATTGGCAACGCTGACCGATGATAAACCGCGAGTCATTGCACTGCAGCCGATTAGCCAAAAGGATGATGCCACACGTTTGTGCATTGAAACCTGCATTGCGCGTAATTGGCGTTTGTCGATGCAAACACATAAATATCTAAATATTGCCTGATTAAACATTTATAAGCGTTATAAATGGGTGGAACCTGTAAAGACTTCTACTCATTTATATTGTTTGTCGCCTCTGAAAACTCCTCCATTTTACCCATCCAGGGCTAATCATTAGCATTCTCTACAAATTCTGTGGCATTAATTTTTCGCTGGAGTGAAAATTATTGCGGTAAAGTTTGGTAGATTTTAGTTTGTATAGAGTTATTTTAAATATTTACCTTTTTAATCAATGGATTAAGTACTCTTTAACATAATGGATGTGTTGTTTGTGTGATACTATAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGGTTATGTTTAGA # Right flank : ACCATATAACCCGTTATCTCTTTCTCAAGTTTTTATATTAGCAGTACTTGTAATAAGCAACATATCCACGTAACCCCTCATGTTCAAAATAGTTCTCCATGCCAGAGAAGTTCACAATTATCGATACAAAAAATTAAATTTAATCAAAGTGTTATTTGTATGATTCTTAAATCGTTAAGAAATTTTAATCTATTATTTTTTTAATGTTGAATTAATATCTATTAATTTTTTCTTTAGGTTAATAGTTTGTTTTTTAAGCTTGTTATTCATTGATTAAGTAATAAATCTGAAAATTTGTCTTTGTTTTGAGGCTAATGAGTGGTTTTACATTACCGTTTCTATACGCTGTTGATGAATAGTTCTTATGAATAAAGATATCCAGTTCATACTTTAAGTGAAAATTGATAAAGTGCGATTCGTATTGTCTTTTATTCTAAAGACATCGAGTGTAGTTAATATTCCTTGTAAAAACAGGGATAAACCGAACTAGTTAAAGTTTT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //