Array 1 2546992-2545242 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP023643.1 Brochothrix thermosphacta strain BII chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 2546991 36 100.0 30 .................................... TGTTTCAAAGTTAGGTGTGTCAATCGTTGT 2546925 36 100.0 30 .................................... TATTTAGTGGCACACCCGTTTTTTTACTAA 2546859 36 100.0 30 .................................... AGGAACGTCCAAAGGAATAATTATCATGAA 2546793 36 100.0 30 .................................... TGGTTTCAGAGAAACGGACATGATGACGGA 2546727 36 100.0 30 .................................... ATCACTAAAAGCAATTTCCTTATCATCTTC 2546661 36 100.0 30 .................................... TACCCAAAAACGCAAAATAACGTCCGACAA 2546595 36 100.0 30 .................................... TGAATCAACAAAAGCGCTCTATATCCCTGA 2546529 36 100.0 30 .................................... ATATCTCAGGTGATTTATACCCAATTGAGT 2546463 36 100.0 30 .................................... TAATGTGAATGTCACGACCGCTGCTCCTGA 2546397 36 100.0 30 .................................... GATGTATCTTTATAACAATTGGTCTTCTAT 2546331 36 100.0 30 .................................... TTTTAAGAATAATAACCAATACTGCATATC 2546265 36 100.0 30 .................................... ACCACTAGCTACCAAAAAAGGCTGGGTTAT 2546199 36 100.0 30 .................................... AGGAACGTCCAAAGGAATAATTATCATGAA 2546133 36 100.0 30 .................................... TGTACCTTGCTAGGCAAGCCTCGGAACTAT 2546067 36 100.0 30 .................................... CCATACCATGTACATCTTGACCGACTTATC 2546001 36 100.0 30 .................................... TACGGCATTCGGTATTCCGTTGTCTCGTTT 2545935 36 100.0 30 .................................... TTTAAATTGGGAGCGAGCTAATAAAAATGT 2545869 36 100.0 30 .................................... TGGCTAACGGAAGCAGAAAACACAAAACAT 2545803 36 100.0 30 .................................... ATATGGTGCAACAGGTATGTTAGGTGTTAT 2545737 36 100.0 30 .................................... ATATGGTGCAACAGGTATGTTAGGTGTTAT 2545671 36 100.0 30 .................................... CACGCATTTCTTTTTCGTAATCTTTATTAA 2545605 36 100.0 30 .................................... CAAGTTTCCAGGATATAACAATCGCCTTAA 2545539 36 100.0 30 .................................... CAAGTTTCCAGGATATAACAATCGCCTTAA 2545473 36 100.0 30 .................................... CGGTGAGTATTCGAGACTATCAAAAGTTAT 2545407 36 100.0 30 .................................... ACCTTTTGCGTAAGCTGGTACTTTCCAAGT 2545341 36 100.0 30 .................................... AGCGCCTCGGAATATCATATAATTCCCACG 2545275 34 88.9 0 ..........................--.....G.G | ========== ====== ====== ====== ==================================== ============================== ================== 27 36 99.6 30 GTTTTAGAGCTGTGTTAAATTGAATGGTATTAAAAC # Left flank : TATTACTAAAATTTATAAACAGCTAGAAAAACAGTATCATAATAATAAGGAAATCGATCTTATTGCTGATCAATTAATAGAGCTCCGTCAACTGATAGGCATTCAGTTAAATGACTATGATTTACCGCTACAACTGAATGAAGAAGTAAAACTATCTTCGCTTTATAAGCTGTTTAATGTTACTATAGAGGTTGAAACAGAGTCGATTTTGGATAGATTATTACTACTGATTGATCTTGTCGCACAATTGAAAATCGCTCGTATCATTATTTTGAATAATGTAAGGTGTTATTTTGTAGAGCAAGAGCTTCTAGAAGTATACAAGTACGCACTCTATAAAAACATAAAGCTATTACTGATTGAATCAACCTTCAAAAAAGGCAAATTGCAATATGAACGAAAATTACAAATTGATAACGATTATATCGAATTTTGGCAGTAATACCTTCATTTTTGAATCGCGCAACGAGAGCAGTAATGACAAAATTTCATTGTTTGAG # Right flank : ATTGACGTCCATTGATATAATGGATGTCTTTTTTTGTTATCTATAACTTTATTATGTCAACTAAATAAAGGGCATTTAAAATAACATGACAAACGTTGTTATGCAAGGTATGATAGAACTAGATTAACATTACTTAAAGGTGGTTGGAGGATGACTGGATTAAAAATTAAGCAATTTAAATTAGATAAACAGGCGATTAAGCAAATTAGTGATGACTATATTGTCGACTATCCAACTGTTTATTTGTTAAATAATGATAAAGAAGCGTATATCGGCGAAACTGTCGCGCTGAAGAATAGAATGCGTGCTCATTTAGCCAATCCGCAGCGCAGTAAACTTACAAAAGCTCATGTCATCAGCCACAATGAATTTAATCAATCCGCCACCTATAATATTGAAACGAAGCTGATTAATTACTTTTTAGCGGATCAAAAATATATCTTACAAAATAAAAGTCAAACGGTTCAAAGTATCACTCATAACTACCATAATAAAGCTTA # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTAAATTGAATGGTATTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA //