Array 1 178341-179866 **** Predicted by CRISPRDetect 2.4 *** >NZ_SOEG01000002.1 Orenia marismortui strain MSL 6dP Ga0206412_102, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================================ ================== 178341 37 100.0 38 ..................................... CTTAATGCTCTTTTGGAAGGTGTGTAATCTAATTCTGA 178416 37 100.0 36 ..................................... TTATCCATTCCAACAACTTTAAATCTTTGCATCTTA 178489 37 100.0 36 ..................................... TTAATCTTTTGACCTTAATGAGCTTAATATATATAT 178562 37 100.0 38 ..................................... ATAGCAATAATAACTGTTAGTTTCAGGATATACATAAA 178637 37 100.0 37 ..................................... TCATTTTTAGATAAGTCAGTAATGCTTTGATTTAATT 178711 37 100.0 35 ..................................... TTAGTCCAAGTTAATAACAATTTAAAAGAAATATA 178783 37 100.0 39 ..................................... TAGCAGCAGGGTGAGGAAAGGCTATCAGAATAAAAGGAG 178859 37 100.0 36 ..................................... ATAATATGTCTTAATCCTACTGCTGTCTGGGCTAAG 178932 37 100.0 39 ..................................... CTGATTTAAGAAGAAGTATTACAGGTTTAGAAGATAATA 179008 37 100.0 37 ..................................... AGTGTTTTAAATAGTCCACCAAAGCCTTTTAAAGTAG 179082 37 100.0 36 ..................................... TTTAAAGAACCTTCGCAATCTACTTTATAATCATGA 179155 37 100.0 36 ..................................... AACTCTACAACATCACCATAATTAATAACAGGCTCT 179228 37 100.0 35 ..................................... TTAGCTTTATAATAGTCTGCAACATCTTGAATAGA 179300 37 100.0 40 ..................................... TCTTGATAACTACAAAGAATTGGATTAGCTTTTTGCCAAA 179377 37 100.0 36 ..................................... CTTTGTTTCTCACTTGCTTCCGACCATTTCTGTAAC 179450 37 100.0 37 ..................................... TGCTTGCAGAGATTGGTATCAAGGGGCAGAAGAGGCA 179524 37 100.0 37 ..................................... CCATAAAAAAAGGTATGCCCCAAAAGGACACACCCTC 179598 37 100.0 38 ..................................... TACATTTAGTCTTTTTGAGAATTACTTTGTTTTCGTAC 179673 37 100.0 48 ..................................... TTTTATTGCAGCTAGCTAGGCTAAGACTAGCTGCTTGTTACAACTAAT 179758 37 73.0 35 ACCT..TT.....T....T..GG.............. ATTACTATCTATTTCTGCTAAATATACATCACAAA 179830 36 73.0 0 .............AA.G.T...T....T.-T.A...A | A [179854] ========== ====== ====== ====== ===================================== ================================================ ================== 21 37 97.4 38 GTTACAACTAATACCTCACTAACTAGAGGACTGAAAG # Left flank : TATTTTTATAATAGTTTATTTTGTATTAAAAATAAAAGCAGTTCTTCACTAAAAGGGGATATTATAATATTTTTAAATTAATATTACTGATGTAGTTATATATAAGTGTTTATTATATAATTTGTATTAGAGAGGTATTATACACTAATAGTGTAAGGATTAATATTATATCGGTATTTTTAACTGATAGATCTTAAGATATATAATGTCTTATAGTTTGTACTATTAGTATATATTTTAAAATTCACCTAGGATAGATATAATATAATTATATTATAATTTCTAACTAAATAGGAAAACTTAATTCTATAAAGGGAAAATAATCAGAAATATAGAACTAGTATATAGAAGTAAATATGATTATTCTACTTTAGATTTGTTTCGCAAACCCCAGGGGATTTTTTGCAAGAATAGCTTTGCGAAAAAATTATATTAGTTTTAGATGCGTTGGTTGCTATAAACCATTGATGTAATAGTGTTCTTACTTTTGAAAATTTGCG # Right flank : ATGGATATAGCTATGTTAATCTATATTAGAGCTAATTATCTCGCTATAGAGCTAATTAGCTCTTTTGTTATTTATAAAACAAATTTTTTTATTTTCATTCCCACCCATATGGGAATCTGCTTTGTTATACTAATTCTAGATTCTTGAGGGAGGTATTAAAGTGGACAAGGAATCTTTAGTTATTGATGATTATGGGATATTTATTGGTAAGAAGAGTGAAAGAGTTGTTCTAAAGAAAAACAAGAAGGTCTTTAAGGAAGTCCCATTTTTTAAATTAAAGGAGATATTAATTAGTAGTTCAGGTGTTTCTTTATCATCCGATGTAATAAAAGAATGTGCTAAGGCAGGAGTACAGATTGATTTTCTTACATATACAGGTCAGCATTTAGCACAAATATCTTCATCTGCTATGACAGGAACTGTTAAGACACGTCGTGAGCAACTTCTTGCTTATAGTGATAAACGAGGAGTAGAGCTTGCTATAGCTTTTGCTAAAGGGA # Questionable array : NO Score: 3.13 # Score Detail : 1:0, 2:0, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTACAACTAATACCTCACTAACTAGAGGACTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.90,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-21] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 2 196687-194594 **** Predicted by CRISPRDetect 2.4 *** >NZ_SOEG01000002.1 Orenia marismortui strain MSL 6dP Ga0206412_102, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 196686 37 100.0 37 ..................................... AAAAATAGACCTTATGATAGTATACATGACATGGAAT 196612 37 100.0 39 ..................................... TCTTATAGAACATTTAAGTTCTATGGGATTTGATAACAA 196536 37 100.0 38 ..................................... AGCTAGTGATATATTAACTGGTTTTGGATTAAAAGCTG 196461 37 100.0 37 ..................................... CAAATGTTTATTTTCTGCCCTATGTTCGAATAAGTCA 196387 37 100.0 36 ..................................... TTACTGATAGTACAACACCTACAGATATGATTTCTA 196314 37 100.0 37 ..................................... TTTTTTTAGTTTTTTCTTCAAATACAGGCCTTAAATG 196240 37 100.0 36 ..................................... AAATTTTGAAGAAACTGAAACTAAAGGAGAATTTGA 196167 37 100.0 37 ..................................... TTAAAAGAATTGCAGAGGGAGTATATAGAAGATTGAA 196093 37 100.0 38 ..................................... ACAGAAGGTATATTTGACGCTTTAAGTTTAGAGGAATT 196018 37 100.0 37 ..................................... AGGTAAGGTGTTTTTTAGATTATGACTTGATTATTCG 195944 37 100.0 36 ..................................... TCATTGGGCATCTGTATTAAAGAAAAATTAACATCA 195871 37 100.0 38 ..................................... TTTAAAAATACAGAAGATTTAATAAGACATTTCAATAA 195796 37 100.0 36 ..................................... TTCAGCAGTTGACAAGTAGTCAGGATTAGTTATTGT 195723 37 97.3 36 .......C............................. TTTTCTCTAGAAATGTCAAAAGATCAACTGGTTAAC 195650 37 100.0 35 ..................................... GAAACTTTCTCAACTTCAAAAATGACATGATAGAT 195578 37 100.0 35 ..................................... TTCCTATTATTTTTTGAAGGCCGATCATCTGCAAC 195506 37 100.0 37 ..................................... CCATGTTGCTACTATCGAACGCTTGCACTACTGCAGA 195432 37 100.0 36 ..................................... AAGTGTGTATAAGTCTAACAATGTGCCTAATACAAC 195359 37 100.0 38 ..................................... TCTACATTTCCTTATATTCTGCTCTTAATTGGGTTAGT 195284 37 100.0 35 ..................................... AACGGACTAAAGAATTATTGGAAAGAAGATAAGGA 195212 37 100.0 35 ..................................... TCTCTATGTTTTTGTAAGAAAGATTTTAGTATTCT 195140 37 100.0 36 ..................................... TTAAATTTAGTGAAGTTGATATGGACAGCATGACAG 195067 37 100.0 37 ..................................... AATTATTAGAATCGGGAGGTGGACATTTTCTAGCAGC 194993 37 100.0 35 ..................................... TTAGAGCTTGTATCGCCACCAATCAAAGGTGACCA 194921 37 100.0 36 ..................................... GTACTATATTCCAAAGAGAATGCGCTTAACTTTTGA 194848 37 100.0 36 ..................................... TTTTGGTCCTACGATTCAAGGTGAGGGTAGTAACAT 194775 37 100.0 36 ..................................... CAATAATGTTTTCGACCAGTACGGGCTTCTCATGTC 194702 37 100.0 35 ..................................... TTCTAAGCTAACTATCATTCTAGACGCTATTAATG 194630 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 29 37 99.9 36 CTTTCAGTCCTCTAGTTAGTGAGGTATTAGTTGTAAC # Left flank : GGTTTAAGGCACTTACCCTATGAGGTAAGTTTTTTTATTTTTTGAGTAAATCCTGCCGAAATCCTGACATTTGATTTAAAATACTCTAATAACTATAAATTCATAAATACTATAGTATAAATTTGACTACCTAATAATTTTAATATTATCTATTTAACTAAACTATTTACCCCACATTTATCTAGATCTTTTACTAAAAAAGATCTTCACTCCTCCCATATTCTCTATTTTAATACTTTAAGTTTACTTTAAACATCTAAATATTAGTTAATTATTTGCTAATCCAACTTAAATATTGACTTTTAATTAGCAATATAAATAAGTTAATTTTCTTATATGTATCTAATAGCTTAGCATTTAATCCTTTAGATCAAAACTCTATCATTAAAAAACACTCAGCTTATGCCAAGTGTAAAAATTATTTGTTGCTATAATTAATAAAGTGTTACTTGTAGAAATGTTTCAAATGATTATTATAACCAAATAGTAGATACTACAAT # Right flank : CGCAAATTTTCAATAGTAAGAACCCTATTATATCAAGGGTTTATACAACTTGAAACATCACAAATTGCTCAGAATTTTTCGCAAAGCAGTTCTTGCAGAAAATATATAGGGGTTTGCGAAATCAACCTCAAGCCTTTATATTACTAGGCTTAGAACAATCTTCAGATTCTATTTAAGTTTCAATGTACAAGTCAAAAACTATGCATTATTGTAACTTTGCGAAAATACACTAAATACTACTTTCTATATCTACTAGATAATCCCTTTATCAAAACCTACTTTTAATCTTTTATGATTTTATAATTCCCCAATCCAAAGACTGTATTCTTACCAATATGAGTATATTGCCCTAATATAAGATAAGGTAAAAACTCTGCTAACCCCCCTTGATACTCTAATTCTCCTATCACTCCATACATCTTTATTCTCTGTTTCTGCTTATTTGAATATCGTTGCCAATTTTCCCATTTAGTATGATCTTTGACCAATTGAATCTTTTT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCAGTCCTCTAGTTAGTGAGGTATTAGTTGTAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.90,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA //