Array 1 2310339-2307441 **** Predicted by CRISPRDetect 2.4 *** >NZ_ML112588.1 Pannonibacter phragmitetus strain 00954 scaffold1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 2310338 29 100.0 32 ............................. TGAGGTGCTGTCATGAGCAAGCTGCTGGCTGA 2310277 29 100.0 32 ............................. AAGTTTGAAGATCTGGTGCGCGTGACGGGCAC 2310216 29 100.0 33 ............................. TGAAAGGATCGGGCCATGGCTTTTGGCGCCCCG 2310154 29 100.0 32 ............................. CGCATGCTGATCCCGCAAGAGCTGCCGATTGA 2310093 29 100.0 32 ............................. GAGGTCGACGGAGCGCAGGCGTTGCGCATCAC 2310032 29 100.0 32 ............................. AATGCGGGCGTCACGGATGGCCTGAGCCTCCG 2309971 29 100.0 32 ............................. GCGGAAGGAGCTTACAGGCGCGCGTTTTCCGA 2309910 29 100.0 32 ............................. CGCGACGTCCAGGTCATAACGAAAGCCGCCGA 2309849 29 100.0 32 ............................. GTGGTCCGGTTTCTGGCGCTGGTGCATGCGAC 2309788 29 100.0 32 ............................. TCAGACAGTGGCAGCAGGACCGGCGCCAGAGC 2309727 29 96.6 32 ............................T TCTGCGAATAGACGAAAGCGGTGACTTCATCT 2309666 29 100.0 32 ............................. GAGATTCGGGCGCTGGAGGACATGAACCCGCG 2309605 29 100.0 33 ............................. AAGAATCTGGTTGAGGCCGCATCCGGCAGCGGC 2309543 29 100.0 32 ............................. TTCAGGTGCTCGCCCAGTTCCTGAATGCTCAG 2309482 29 100.0 32 ............................. CGCCTAAAGAAGCGCTGCACCAGCCGTCGAGA 2309421 29 96.6 32 ............................G CAGGCGGCTGCCTGCACACTCCTGCTCGCGCA 2309360 29 96.6 32 ............................G TTCATCGACCAGCTGGTGACCGCTTCGATCCG 2309299 29 100.0 32 ............................. GAGATACCGGCCCTTGCTTTCGGCCGGGCGGA 2309238 29 100.0 32 ............................. TCAATTGGATTCCCGGGAATCCAACAGATGTG 2309177 29 96.6 32 ............................T TAAGTGCGCAGGCCTGTTTGCGGAGTTATCCA 2309116 29 100.0 32 ............................. GGGTGGCAAAACGCGAGGCGCGAGCATGATCC 2309055 29 100.0 32 ............................. GTCCATTTCGCGCCGCGCCTTTTCGATGTCCG 2308994 29 100.0 32 ............................. ATGCGGCGCGGCGCAAGGCCTGGCTCAAGGCG 2308933 29 100.0 32 ............................. GGGTGGCAAAACGCGAGGCGCGAGCATGATCC 2308872 29 100.0 32 ............................. GTCCATTTCGCGCCGCGCCTTTTCGATGTCCG 2308811 29 100.0 32 ............................. ATGCGGCGCGGCGCAAGGCCTGGCTCAAGGCG 2308750 29 100.0 32 ............................. TTCACGGCCAATACGGGCCGCAAGCCGCTCCA 2308689 29 100.0 32 ............................. GAGGATACGCGCTCACGACCACTTCCACCGGA 2308628 29 100.0 32 ............................. CGGTCGCCTTGCACCACGTTCCAGTACTGCAG 2308567 29 100.0 32 ............................. GACCGGATGTTGCCGGAGCCGTTGGTTTTAAT 2308506 29 96.6 32 ..C.......................... AGCTCATAGGGCTGCCCTGCCTCCACCCATGC 2308445 29 100.0 32 ............................. CGGATCACCGATTCATGACTGTGCAGGACAAC 2308384 29 96.6 32 .............C............... CGGGCAGAGCAGCGCCTGGCCAGCATGCGCGC 2308323 29 96.6 32 .............C............... CAGAAGCCCGGCGCTGTTTCGGCAGGGATGCC 2308262 29 96.6 31 .............C............... GCGATGCGTATCTGGCGAGCTGAGGGCTGGA 2308202 29 96.6 32 .............C............... GACTATGGCAATCCTTGCCTCCGCTCATGCGC 2308141 29 96.6 32 .............C............... GGCATCTGATAGGCCCGCTGCTGCAGCTGTGG 2308080 29 96.6 32 .............C............... GCCGCTGGCAATGCGGTGCCGGGCTCCACCTC 2308019 29 96.6 32 .............C............... CGTGGTGGACTTCTCGCCGCTGCTGCCGGGCC 2307958 29 96.6 32 .............C............... GGCATCTGATAGGCCCGCTGCTGCAGCTGTGG 2307897 29 100.0 32 ............................. CCCACCGGCCAGCCCGTACGTGTCAGGACCAC 2307836 29 96.6 32 .............C............... AGATCAGCGGTGAAAAGCAGATCAGCCTGATC 2307775 29 96.6 32 .............C............... GCAAACACGCCGACCTGGCTCCGGACGCGCAC 2307714 29 96.6 32 .............C............... TCCCATGGCGGTGAGGCGGCGGGCTGCTTTGA 2307653 29 100.0 32 ............................. CCGATCCAGACCTCCGCCGATCCGGCCGGGAT 2307592 29 93.1 32 .............C............A.. ATTTCTCGACCTGGTGCACCCCTCTGCCTTCG 2307531 29 93.1 32 .......T.....C............... CGTGTGCGGACAGCTTCAGCCATCTCGGTGAC 2307470 29 93.1 0 .............C..........T.... | T [2307443] ========== ====== ====== ====== ============================= ================================= ================== 48 29 98.4 32 GGTTCCCCCGCAATCGCGGGGATAGCCCC # Left flank : GCTCCATCATTCCCTCGATGATTGATCGGATCAAGACTTTGATCGGCCCTGACCGGGACCACACCAAGCCGGAAACAGAGGCCGGGCAAGGGGAAGAATGATGCCGATGGTGGTGATCATCACGCGCGATGTGGAATCGCGTTATCGCGGCTTCCTGGGCTCTGCCATGCTCGAACTCTCTCCAGGCGTTTACGCCGGGCCGCGCATGAGCGCCGGGGTGAGAGCACGAATCTGGACCGTGCTGACCGATTGGTACGCCCAATTGGGGCGGGGAAGCATCGTCATGATCTGGGCCGACAGTGCAGCGAACGGCGGCCTTGGTCTTTCCGCTCTGGGCGAGCCACCAAAGGATATCGTAGCCCACGACGCAATGCTTCTGGTACGCCGCCCGGTGCCACCGGAAACAGCAAATTGCAGGTAGAATCAAAGTGAAAGGTAAACATTAAATCTTTCCCTGTTCTTTGACATTGCTTATAGATCTCAATCGGTTAAGCATCAGA # Right flank : AAAGACAAGCAATCGGCCGTTTCTCGGAATGCGTCCCGACCGAATTGGGGTGTAATCCGCGCCGCTGCACCCAGGATTTGCAAGGTTGTAGCGTCAAATCAGCGATTTGCTGTCCTACCCGGCAGGTGCGGTAATCGGCAGCAATATCGGACCACAGAGGAAAATCAGCGGGGGGGTGGCGGAAGAGGTGGGATTCGAACCCACGGTAGGCTCTCACCTACGCCGGTTTTCAAGACCGGTGCCTTAAACCACTCGGCCACTCTTCCGTTCTGCAAACCGTTTCGGGGCTTTGGGGGGGAATGTCAAGCGGGGTGGTGTGAATTTGTGAGGACTGCCCGGAACTTGCCAGAAAACGTGCCGGAAACCTGCCGGAGAACCTCGCAGAAGCATTAGCGGAAGACGCTCCGGGGCGGGGAGGGCGGCACCTTGAGGCGCATCTCCGGGCCGGCACAGGATTGACTCGGAAAGGCGGCCTCAGCCTTGCCATATCCTCCGGCGGT # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTCCCCCGCAATCGCGGGGATAGCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [45.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //