Array 1 10445-7116 **** Predicted by CRISPRDetect 2.4 *** >NZ_FJDP01000019.1 Legionella pneumophila strain 2531STDY5467401, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 10444 28 100.0 33 ............................ ATTCATCCAAAAAACACTGAGCAATGTTGCTGA 10383 28 100.0 32 ............................ TTTTGTTAAATCTTTTATTTTAGTTTCTAAAA 10323 28 100.0 32 ............................ ATACTCTCTAACATCATCTTTAGCAATTACCC 10263 28 100.0 32 ............................ TCTTTCTTTGCTGCTAGTGCGTCAATAGATTT 10203 28 100.0 32 ............................ AAGGAATGATGAGAATTAGTGTTGCTGAGTGG 10143 28 100.0 32 ............................ ATAGAGACAAGAAACTTCAATCATTGCTTTAT 10083 28 100.0 32 ............................ AGAAGAATTAAAAAACGCTCTTATGCAATGTG 10023 28 100.0 32 ............................ TTGAGAGTAGCAACAGATTTAACCAAGGGTGA 9963 28 100.0 32 ............................ TTCCGCAACCGAGATCATAAACTTGGCTACGT 9903 28 100.0 32 ............................ ATTACTTGTTGTACTACTAATTACTGTATCCC 9843 28 100.0 32 ............................ TACCAGCGAACGAGCCGCCGAATGGAACGGTC 9783 28 100.0 32 ............................ TATCAGACTTAAACGAATCTCACTATAAAACA 9723 28 100.0 32 ............................ GGCGTATAATTATCTCGTATGTATTGCTCTAA 9663 28 100.0 32 ............................ AAAATTGTTTTTCTGCTCAAGAGATGGGGAAC 9603 28 100.0 32 ............................ TATGATGACGGCCTCCACGGAGAACTTGTTAT 9543 28 100.0 32 ............................ ATCACGAATGCACCCAAATTGCCTGTTAGTTA 9483 28 100.0 32 ............................ ATGTAGCGAAGGCGAGGTTCCATAATGTATAA 9423 28 100.0 32 ............................ CACTCGATGGGGTTTTCGGAGAATCATTCAGC 9363 28 100.0 32 ............................ ATTACCATTTTTTTAATCTGCTCAGATAATGG 9303 28 100.0 32 ............................ TTCCAGCTCTAATATTTTACACGCATCATATT 9243 28 100.0 32 ............................ CTGCGGGCTTGGAAATGATGAAGGCTGTTAAT 9183 28 100.0 32 ............................ TGTCTGCCGTGTCGCCGCCGCCAGAACCTAAC 9123 28 100.0 32 ............................ AATTGAACAGATAGTTGAAGAATCAGTAAAAG 9063 28 100.0 32 ............................ TTCTTAGTCCCTTTACACGCTGGGCATCTAAT 9003 28 100.0 32 ............................ TTGAGAGTTGCTCTTATGGCCTCTTTTGTAGA 8943 28 100.0 32 ............................ TAATTCATGAACGATAGGGTAGGTACTAGCAT 8883 28 100.0 32 ............................ TCATTTTGAACTGTAAATAAACCTTTCGTTAA 8823 28 100.0 32 ............................ ACTGTGGTGAGTATGGTGAGAAGTACGGAAGA 8763 28 100.0 32 ............................ ATGTGCACCTACACCGTGAATGTGCCGGTATT 8703 28 100.0 32 ............................ TCTGAGCTTGAGCAGCTTGAAAAACAAATACA 8643 28 100.0 32 ............................ AAAACGTGCTCCACCATTTAGTTGACGGGTCA 8583 28 100.0 32 ............................ GCTTGTGCCATGCGCTTAACTATTGCCCTTTC 8523 28 100.0 32 ............................ GATATGTGAAGAAGCAAAGCAAGTAATTGCTA 8463 28 100.0 32 ............................ TACTAGCCCTTAGCTATGACGAGCTCGACCAG 8403 28 100.0 32 ............................ GATTGAGATTTCAGTCGAATATATTTTACCTG 8343 28 100.0 32 ............................ TGCCCTGAACTTAGATTAATAATTACTCCATG 8283 28 100.0 32 ............................ GCTTGCACTTAGTAGGTAACGCTATCGTCAAT 8223 28 100.0 32 ............................ TATAAAATTTAATTCAGCGTCATATACCGGCG 8163 28 100.0 32 ............................ TCAGCAGCAAGACCCGGGGTCTGCAACTCAAG 8103 28 100.0 32 ............................ AAAGCCGCCGACATACGCCCTAAACTTGGTGT 8043 28 100.0 32 ............................ TATCTATTTAGATATAGCCTTCTTTCTGTAGA 7983 28 100.0 32 ............................ AGCAGTTCCAGCAGCATTTGATGGCTTATAAG 7923 28 100.0 32 ............................ ACAAGAGGCGCAACTAAACCTAACACAAATGT 7863 28 100.0 32 ............................ GGAATTTGTCGGCCGCATAGACCGCTTTTATC 7803 28 96.4 32 ...............A............ TTAACAGTTAATCTTTCAACATCAGATAAACT 7743 28 100.0 32 ............................ TTACCTCATGACTTGCTTTCTAACCTTTGCGC 7683 28 100.0 32 ............................ TGTCCGCCGTGTCACCGCCTCCGGAACCTAAC 7623 28 100.0 32 ............................ CAATTCGAACAAAACATAATCCTCAGGATTCT 7563 28 100.0 32 ............................ TGCTGGATTGTGCCCCAAAGCAAACAGAGACA 7503 28 100.0 32 ............................ AATACGTGGTTATGACCTCATCTAAAGACGTA 7443 28 100.0 32 ............................ ACATGAAGATAAAAAAACGGGCAAAAAGACCT 7383 28 100.0 32 ............................ AAATGCCGACAACGGCGCTTAAAAGGTCTTCT 7323 28 100.0 32 ............................ AGTGAAGCTATTTTTAACTGGGATAACATGAT 7263 28 100.0 32 ............................ TTTTGCCGCTCTTTGAGAGATATTGCTGTTAA 7203 28 100.0 32 ............................ GCGATATTTTTAATCAAGAATTCGAAACATAT 7143 28 96.4 0 ...........................G | ========== ====== ====== ====== ============================ ================================= ================== 56 28 99.9 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CGGTGTCTCGTAAACAGCCTACAATGAGCCAATCAAAATTGAGGCGGTTAATTAAACGTAACTCCTTGACAGAAGATGAAATCAGGCAATACAAGGCAAAGATGTTTTCCAAAGGTCTGGATAATCCATATATTGAACTTGTGAGCGTATCAAACGGGCAAAGGCACCGACGCTATATTGAGTTTGGCGAATTGTTCAATGAGCCAATTCCTGGCCTCTTTGATCAGTTCGGCCTTTCTAACAGTGCTACTGTTCCATGGTTTGATTAAATTTTAGAACAAGGTAAATTCCTTGAGTTCGATAGGTTAAAGTAAGGAGATATAGTTTGGTCAAATGCTTCAATACTTGATTATTTCGATACTTCTAACGACCAATAAATTTAGTTCTTTAAAAATTTGTCTTAAAATCAATTGGTTATAAATTAGCTGAAAGATATTGGGTAAATCGATTTTTTTCAGCTAACTTTCTGTTATAACTATTTTTTTAAGATTTAGAGCAGA # Right flank : TTATTATGTTAAAGGTGTTAGCACGCTACGCAGCAAGGTCGGACCAAGGCCTGACCTTGTTTTGATTAGGAAAGTCTAATCATGACTATAATCTCCATTTCTCTTTATGGAGTACAGCAACCGTTAGTCAAATCTATAAATAACCTAAACAAATAAAAATAAACTCTCTAGTTCCATGGAAATGAGTGTAATTGGATCGAAGTCAAAATAAATTGTGAAGTCTGATTACTGAGAAAATTAAATTTAGTTGATGAGTATCTATTGAATCATGAGAATAATCTAATGGTGTACGTTAATTATACACGTATGCTAAAAATTACTACCTGATGAGCTAGGATATTCTCTACCGCGTTGTTTGAATCACACTGAGTCAATCGTAAATTTATTTAGCATTACTGAGAATTATTTAATCCTCAAAAACTCAATAATAAATTTAGATATTTCACAAAATCATACGGTGAATGCTCTCCTGGTTTCGTCAGTTACTGAAATAGTGGTTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //