Array 1 200564-206146 **** Predicted by CRISPRDetect 2.4 *** >NZ_PVTO01000001.1 Alkalibacterium olivapovliticus strain DSM 13175 Ga0180996_101, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================ ================== 200564 36 100.0 30 .................................... AATATTTTTACAACAGTTTTGTTCAGTGCC 200630 36 100.0 30 .................................... AGTCGCCATATCGTACACGTCTTTATGGTT 200696 36 100.0 30 .................................... AAAGAGGAACTTGTATCCAAAGAGGTTATG 200762 36 100.0 30 .................................... GCAGACCAATGAATTGTTTAACATCAGCAA 200828 36 100.0 30 .................................... CTGAATGTATCGCTGTCTTGCGCTTTCAGT 200894 36 100.0 30 .................................... ATGACTTATGGTACAAGCCGGTTGGTGAAG 200960 36 100.0 30 .................................... TGCGGCGTTTAAAGATATCTACAACGAAGC 201026 36 100.0 30 .................................... TGCGGTGCTTGTCAATGAATGGATCATCTC 201092 36 100.0 30 .................................... AATGCACAAATTCGGGAATGTAACGGATAT 201158 36 100.0 30 .................................... ATAGGAGAGGTAAGAGTGACATACACAGAA 201224 36 100.0 30 .................................... AACATTTAACCACAATCCAGCAAAGGTGGT 201290 36 100.0 32 .................................... CACAGATATGGGAATCGCTTTGGAACGGCATA 201358 36 100.0 30 .................................... TCTGCAAAGCTTTTTCCCTTGCTTCTAACT 201424 36 100.0 30 .................................... CTACACAGAGCTCGTTAAAGCTCTTATTGT 201490 36 100.0 31 .................................... GAAGTACCCTTTCGCTCGGTTGGAGAACTAA 201557 36 100.0 30 .................................... GCCAGATTATAGTGAGACAGTCGAGATCTT 201623 36 100.0 30 .................................... TCAAACTGTTTGTCAACTTTTTAAGCACCC 201689 36 100.0 30 .................................... TAATAAATTTATTTCCCGATTATAGCCATC 201755 36 100.0 29 .................................... TATAACCAGTATGATGTACGCCATCGAGC 201820 36 100.0 30 .................................... TACCTAGATTGCAGATCGAGGAGGGAAGTA 201886 36 100.0 30 .................................... ACGGTCTAACTTATTTAACGTCAATATGGC 201952 36 100.0 30 .................................... AGACTGTCCCTAAGAATACTTCTAGCGCTA 202018 36 100.0 30 .................................... ACGCACCCGAAAATGATTCGTCATTTATGT 202084 36 100.0 30 .................................... CAGCTGGCAGTAGACCAGTATATGACGCAA 202150 36 100.0 30 .................................... AAAAGCCGATAGACCCGTCACTTGGTCGTC 202216 36 100.0 30 .................................... GCATCATTGATCGTGTGCTGTTCGATTTTG 202282 36 100.0 30 .................................... TAAATATCGGCAGGACTTCAGCCCCGATTG 202348 36 100.0 30 .................................... AAAACGAGTCATTTACCGTTCAGGATTAAG 202414 36 100.0 31 .................................... TTCTGCTATGACTGTACCGCCACCACTTGGA 202481 36 100.0 29 .................................... GCTCGTAGACTGGCTCAGTGTCACTTTTT 202546 36 100.0 30 .................................... ATCGAGCCTAGTTACATTATGCCGAGCTTT 202612 36 100.0 31 .................................... CAATGGACTCGGCTCAACCAAATGATGAACT 202679 36 100.0 30 .................................... ATAGGCTTCATAATCATCTATTTCACCGTT 202745 36 100.0 30 .................................... TATATGCTGACTGAAGCTTTTCCTGATGAT 202811 36 100.0 30 .................................... ATATATCTAAAGCGTTTATCGAAGAAGCCG 202877 36 100.0 30 .................................... CAGATCCTGGCTGGTTATTCATTGCTGATG 202943 36 100.0 30 .................................... TAAAAAGCACCCACCATATAGGCAGATGCT 203009 36 100.0 30 .................................... CGGAAGAACAGAGAGAACTGGGATAGAGCA 203075 36 100.0 30 .................................... ACATGGATGTGGATGTGACACCAGCGCTGC 203141 36 100.0 30 .................................... AACAGGCTAATAATACCAGGACTAATCACC 203207 36 100.0 31 .................................... CCTGCTCTTTAACCAACTCTTTCTTTCCACG 203274 36 100.0 30 .................................... TCTGAAGCTATCCCAAACGCACCACCTAGT 203340 36 100.0 30 .................................... AAAGGGTATCGGTCACCCACTTTGAAAGAG 203406 36 100.0 30 .................................... TTCGAACAAACAATCGTGATATAAATTTAG 203472 36 100.0 30 .................................... AAAGAACAGCAATTAAGTCGCAGACTACCC 203538 36 100.0 30 .................................... AACAAAAAGTTTTCTTCTGTCGGGCTTTCA 203604 36 100.0 30 .................................... TCAACTCGTTGGACAATAATTTCAGCGTTC 203670 36 100.0 30 .................................... AACGCTGAACTTAAACCTTGAAGCTCCCCG 203736 36 100.0 30 .................................... TCAACTCGTTGGACAATAATTTCAGCGTTC 203802 36 100.0 30 .................................... AAACAGATTACTAATACCAATCCATTGAAC 203868 36 100.0 30 .................................... CTTCTGTGGTTTCATCGTCTGGTGCAATGT 203934 36 100.0 30 .................................... TGATGTGAATGCTCATGCGACACATTCGAT 204000 36 100.0 30 .................................... TGATTGTGCTCGATTCTGGCGAGTTAGTCG 204066 36 100.0 30 .................................... TACGATGGTGAAAGAGATTGTATCGGATAT 204132 36 100.0 30 .................................... CGCTACGAGATCACTTCCTGACTCAAGGCG 204198 36 100.0 30 .................................... GAGCGATTCATTCGTTACTGGCCCCTCGGG 204264 36 100.0 30 .................................... ACCTATACGAATGTTTGAATCAGGCCTATA 204330 36 100.0 30 .................................... TGGTAGGGTCCTCCTACAATCTAACGAAAG 204396 36 100.0 30 .................................... ATATGTTAGATGTATCAGGTATGTCAGAGG 204462 36 100.0 30 .................................... GTCAATAAGTATGCTCGTATTATTAAATTA 204528 36 100.0 30 .................................... GGAAAGAGAATATCACTAGGGTTCATATTA 204594 36 100.0 30 .................................... TTTATTTACCGTTTAGTACGGATATTAACT 204660 36 100.0 30 .................................... ACAACAACACAGTAGAGAAAGGCAGCACCC 204726 36 100.0 30 .................................... GATTCAATATGAACGACCAAGAGATTGTCT 204792 36 100.0 30 .................................... CTCAACAACGAAAGCAGCGTGTGAAAATTG 204858 36 100.0 30 .................................... ATCACTCGATCGGGTGAACTCAATGAGCAT 204924 36 100.0 30 .................................... AAACGATAGCATTAATTTCTGATCTGAATA 204990 36 100.0 30 .................................... TGAAGAAAGTTAAAGTAGGCGGATTGACTT 205056 36 100.0 30 .................................... CTCTGGATGGAATCGAATCTTTTCCTCGTT 205122 36 100.0 29 .................................... ACGGCGTTTAACTGCGGGATTACCGGGTC 205187 36 100.0 30 .................................... ATTCAAGTGTTTATATAGGACATTGAGCGC 205253 36 100.0 30 .................................... TTAGGTGTGAGTGTGAAACGGAAAAACGTG 205319 36 100.0 30 .................................... TGTTGTCATTGGCTGACGTCAGAACCGTGT 205385 36 100.0 30 .................................... TAAAGTGAAACAGTTAAGACAAGTCGATAC 205451 36 100.0 30 .................................... TAGCTATACTGATAATGAAGTTGAAGAGAT 205517 36 100.0 30 .................................... CTCACAAGAAAAAACTATCACACTGGGCGA 205583 36 100.0 30 .................................... TAAAACCATAGTACCATGACAGTATGATTA 205649 36 100.0 30 .................................... TACATTTTTAGAATCTAAATCCAACAACCA 205715 36 100.0 30 .................................... TGCCACCGCACAAATGCCAGCGGGTCAGTA 205781 36 100.0 30 .................................... AGAAAAGAATTTAGATTATCTAAGTTTGTT 205847 36 100.0 30 .................................... TCCGGTTTAAAATCGAATTCATCGCCGTAT 205913 36 100.0 30 .................................... TTAGACGTATAATAAAAGGTCGTGTCCGGC 205979 36 97.2 30 ...............A.................... ATTAATATTATCAGTGATTCACCTATGCGG 206045 36 100.0 30 .................................... ATACAGAATGGACACTAAATTAAATAATAG 206111 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ================================ ================== 85 36 100.0 30 ATTTTGGTACTCTCTCATCTTTTGGTATAAAGGAAC # Left flank : ATTAAAACAGCAGCTTCGAATAACCAGAAAATTAAATAGTAGTAAACGAAATATTTTCCTGATCATTAATCCTGAACTTGAATTAAATTTATTTGAACTTGAGCAACTGGATAAATTTATGAATCTTCAGACTGATTACTTTATTGTCATTACATCGCATGTCTTTCGGGGTTCAGTTAATGTTATTCATGATGAAAAAATTATTAACTCCTGCAGTTTGTTAAAATATAAAAGCGATATTGAGGATCTACTTCCCTTTGTATTTAAAGAAGACATATATAATGATGCAGTAAATTGGTATATTGAACTTGTGGATAAGTATGACAAGAAAACGATTAATTTAGCACTACCATCTGTGGATAAGTTGGAGACTTTTATTTATCTCTACTTACTTTTTTATTTATCAGACATCTCGTTTTCCGTTGATTACAAGGGGATTCCACCTGAATATCAAAGTTACATTGCTTCATTGCAAGATAATAGGTTATAATGAAAATGGC # Right flank : CATTTGGTGTTGATGTAGAAAAGCAAAATAATCCAGCCAGTAAATGTCACTTTATTCTGGCATATTTTTCGAAACCACTGGTCAATTAAGCGACAGAATCTGTTTATTCCAGCACTTTTGTCAGTTTACTACAGCTACTAAAAAAAACCCATCACAATTTACGATAGGCTTGTCACGATACGTATGTAGTTAGTTTAAATTTGAGGTTAATCCTCTTCTTTAAGTTCAATAATTTCATCAGCTTCAAGAATCTTTATCATCTGAATAAGTTCTCCTTCTGCATAATCTCTCTCCAGCACATTGAATCCGAATTTTCCGTATAACCGAACAAGATAAGGAAGGTCTTTACATTCCAGCATGATAATTCTTCCACCTAATCTGACTTGTCCTTCGAAAATTTTAGCAAGACAATACTCCAGTACTTCTGATCCAGAAATAGCTCGTGGATGCATTTCATTTTTTCCAAGTTGTCCGATCAGTATGGAGGGGAACTCCGTGAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTTGGTACTCTCTCATCTTTTGGTATAAAGGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.90,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //