Array 1 19777-16757 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABAOZ010000014.1 Arcanobacterium phocae strain ARC127 NODE_14_length_54415_cov_72.370422, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 19776 29 100.0 33 ............................. ATGATTTTAATATCGATATACCAATTCGTACTT 19714 29 100.0 32 ............................. TTCCGCAACGCCGTTGAGGAAGCACACATCAC 19653 29 100.0 32 ............................. CAGATACCTACACCGCACGTCGAGCGGATAGA 19592 29 100.0 32 ............................. CTGAATACGAAAATAGCCGGCGTGTTAAACCG 19531 29 100.0 32 ............................. GGCGTAATCAATTTCTTTGTAAATTCCTCAGC 19470 29 100.0 32 ............................. AAATCTTCTTCACAGGGGGACTTCCCTGCTGG 19409 29 100.0 32 ............................. GCCATGCGTGCGTTGCGAGCGTTCCTATTAGC 19348 29 100.0 32 ............................. ATTGATTGTTAATGCGTCATTGAAGCGTGCAT 19287 29 100.0 32 ............................. AAGCTATTGCATTATTTACGAAGTTTGCCATT 19226 29 100.0 32 ............................. TGAATACTGAATCAACCCGGCGTTCAACGCTC 19165 29 100.0 32 ............................. TGATCGAAGATTTCTATGAGGTTCAAGCGAAT 19104 29 100.0 32 ............................. ACTGAGAAACAACCCCAGCCCCAGGAACCGTT 19043 29 100.0 33 ............................. AGTGGCTCCGTTGAGGAGTAGTACGAAATGATT 18981 29 100.0 32 ............................. CGTCTAAGTTGCCCCTTAGGCGGTCATCTATA 18920 29 93.1 32 ..........................G.G GTGATGGGTTCGCCACTGGCCTTCTACCAGTA 18859 29 100.0 32 ............................. ATTTTCGGACATAACTTCTTCTCACCTACCGC 18798 29 100.0 32 ............................. GATTTGTGCCCAGTCGTCGAGGTTCTCCCCGA 18737 29 100.0 32 ............................. GACATCGGAAAGGGTTGGATCCCATGAGCGCT 18676 29 100.0 32 ............................. GTTTTGACGTTCCATGGAATCCCGCCATTTGC 18615 29 100.0 32 ............................. AATTTCGAGCTATGCGATCGGCAGGAACGCTG 18554 29 100.0 32 ............................. AGGCTCTACGAGATAGCGGAAGGAGTTGGGAA 18493 29 100.0 32 ............................. GGTTCGTCCTCTATCCTGCCTGCACTACTTTT 18432 29 100.0 32 ............................. GAAAAGATCATTGAAAACCGTCCACGGCTACA 18371 29 100.0 32 ............................. TGTTCCAGTAATAAAGCTAGCTATTTCTTTGA 18310 29 100.0 32 ............................. AGCTTATATCGAGAGTCTAACTGGCGAGAACC 18249 29 100.0 32 ............................. GAATGCGTAAGGTTTTCGAAGTGTAGTCATAC 18188 29 100.0 32 ............................. GACTTGGAAGGTGCTATCTCGCCGACCTTCCT 18127 29 96.6 33 ............................A CCAAAAGCTACTCGGAAGGCGCGTTCTTCGGGG 18065 29 100.0 32 ............................. CTCGGCCTGGGCTGGTGTTATAGTTTTTTCAT 18004 29 96.6 32 ............................T TAGTGCAGTACCGGAGTTGGCGTACACGGATG 17943 29 100.0 32 ............................. GAGATACCGTTCACGAAACCACGGATAACGTT 17882 29 100.0 32 ............................. CGTTATCAACATCGAAAATCTGGCTAGACTCC 17821 29 100.0 32 ............................. TTTTGGGTATAAAAATATCCCCTGCGCTTTTC 17760 29 100.0 32 ............................. ATACTGTAAATTCCTCCTGTCCACTCTCCCGG 17699 29 100.0 32 ............................. TGGTGTGCCTGTCGAGTTACTTGCTGGACCTC 17638 29 100.0 32 ............................. ATCAGCGAATATTCCCGCCCGTCCAGTGACGG 17577 29 100.0 32 ............................. TTGCGAGTCTTGATTGTAGCGCCGATAATCGT 17516 29 100.0 32 ............................. TATATCCGAAGGGCTGGATTGTCAAGAACGCT 17455 29 100.0 32 ............................. GAGCCACCCCAAGACAACCGTTAAAGAATCCA 17394 29 100.0 32 ............................. TGCTTTGGTGCGCGCTGCTGAGCTGATGGCGC 17333 29 100.0 32 ............................. ACAGCTTCGAGAATGGCAAGAAGCTGGTCGCC 17272 29 100.0 31 ............................. TACACGGGGGAGCTTTTTGAAGCTACTCCAG 17212 29 100.0 32 ............................. AAGGTCTAATCCTTCCGCCTGGTCAAGAGGGT 17151 29 89.7 32 ..........................CTT TCTCGCATTGCTGCAAGATTTGCTGTACTTGT 17090 29 100.0 32 ............................. AGGAGGTGCGCTAAAAATCGAGCTAGTAGATG 17029 29 100.0 32 ............................. ACATCATGGTATGCCCTCCAAACCGTTGAAGA 16968 29 100.0 32 ............................. TTGCTGTGTAGGACGAAATCGTTGAAATGGTT 16907 29 100.0 32 ............................. GGTGGAATTAGCTGTGCGTCTTGCACTTTCGC 16846 29 96.6 32 ............................G TGCTCGCGGACATGACGTGACGCGCACCGTCG 16785 29 96.6 0 ........................C.... | ========== ====== ====== ====== ============================= ================================= ================== 50 29 99.4 32 CTCTTCCCCGCACACGCGGGGGTATTTCC # Left flank : TAGACGCGATTTACGGAGGCAAATTCATAGCAAGCATATATTGGAAGACATGCTTGGCACGCTCATGGAGATCTTAGAACCACACCTGCCGAATCGTGATGATGATCGATTGATCAATGATAATGGTGAAGTTTCTGGGCACGTACAATACGGAAAAGATGATGAGTGATGTTTGCAGTCTTAACAATATCTGCAGTTCCCGAGCATCTTCATGGCTATGTAACCCGATTTCTCACTGAGGTTGAAAGTGGGGTTTACGTCGGAAATATTTCTCGGAACGTGCGTGAACGCCTATGGGAACGTGTGAGTAGTACGCTTGACGAAGGAACTTCTACTATGATTTATAGCGACCCGCGACAAGAACAAGGATTCTCGATGCTCACTGCAGGAAAAAATTCACGAAAAGTATTGGACTTAGACGGTCTAACCGTTGTGTCCATGCGTCCTGGACGTGGAGAATCCAAAATTCGAGATCGTTGAAAATAAAGGCTTTCGTTAGT # Right flank : AAAATTTGAAGGCGATTCAAAGATGGGCGCTCAAGTGATCGGAACGATCATGATCAAGGTAGCGCTTCTTATTGTCGCTATTCAAAATGTAGATCTAATTCTTAAAGCTATTAACGAAGCTGGCGAAACACTTATTAACGGGCTGAAAAAGTATGCAACAGTCATACAGGCTAACCCTGTCAATATCGGTGATCTTGATATGGATACTCTAGATATGATCGGCGCAATGATCATTCTATTCTTGCCCTGGCTGATTTCAATGCTTGGCGGCATCGTCGTAAAAATCGTTGTACTCTTGCGATTTGCTGAGATATACATACTTTCTGCTGGGGCAACTCTACCGTTAGCATTCTTGGGTCATACCGACACAAAATAAATTTCGATCGGATACCTCAAGAAGTATGCAACGGCCATGCTTCACGGTTTCACGATCATCCTTGTCCTGATCATCTTTGCCAAATTCCAAGGAGCCGGTACAGACCTAGGAGAAAACCCAACAG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTTCCCCGCACACGCGGGGGTATTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //