Array 1 16756-17332 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABAPB010000018.1 Arcanobacterium phocae strain ARC106 NODE_18_length_17332_cov_78.954970, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 16756 29 96.6 32 ....G........................ CGACGGTGCGCGTCACGTCATGTCCGCGAGCA 16817 29 96.6 32 C............................ GCGAAAGTGCAAGACGCACAGCTAATTCCACC 16878 29 100.0 32 ............................. AACCATTTCAACGATTTCGTCCTACACAGCAA 16939 29 100.0 32 ............................. TCTTCAACGGTTTGGAGGGCATACCATGATGT 17000 29 100.0 32 ............................. CATCTACTAGCTCGATTTTTAGCGCACCTCCT 17061 29 100.0 32 ............................. ACAAGTACAGCAAATCTTGCAGCAATGCGAGA 17122 29 89.7 32 AAG.......................... ACCCTCTTGACCAGGCGGAAGGATTAGACCTT 17183 29 100.0 31 ............................. CTGGAGTAGCTTCAAAAAGCTCCCCCGTGTA 17243 29 100.0 32 ............................. GGCGACCAGCTTCTTGCCATTCTCGAAGCTGT 17304 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 10 29 98.3 32 GGAAATACCCCCGCGTGTGCGGGGAAGAG # Left flank : CTGTTGGGTTTTCTCCTAGGTCTGTACCGGCTCCTTGGAATTTGGCAAAGATGATCAGGACAAGGATGATCGTGAAACCGTGAAGCATGGCCGTTGCATACTTCTTGAGGTATCCGATCGAAATTTATTTTGTGTCGGTATGACCCAAGAATGCTAACGGTAGAGTTGCCCCAGCAGAAAGTATGTATATCTCAGCAAATCGCAAGAGTACAACGATTTTTACGACGATGCCGCCAAGCATTGAAATCAGCCAGGGCAAGAATAGAATGATCATTGCGCCGATCATATCTAGAGTATCCATATCAAGATCACCGATATTGACAGGGTTAGCCTGTATGACTGTTGCATACTTTTTCAGCCCGTTAATAAGTGTTTCGCCAGCTTCGTTAATAGCTTTAAGAATTAGATCTACATTTTGAATAGCGACAATAAGAAGCGCTACCTTGATCATGATCGTTCCGATCACTTGAGCGCCCATCTTTGAATCGCCTTCAAATTTT # Right flank : | # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGAAATACCCCCGCGTGTGCGGGGAAGAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [2-3] Score: 0/0.41 # AT richness analysis in flanks prediction: F [56.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.37 Confidence: LOW] # Array family : NA // Array 1 2216-49 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABAPB010000016.1 Arcanobacterium phocae strain ARC106 NODE_16_length_37571_cov_75.769003, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 2215 29 100.0 33 ............................. ATGATTTTAATATCGATATACCAATTCGTACTT 2153 29 100.0 32 ............................. TTCCGCAACGCCGTTGAGGAAGCACACATCAC 2092 29 100.0 32 ............................. CAGATACCTACACCGCACGTCGAGCGGATAGA 2031 29 100.0 32 ............................. CTGAATACGAAAATAGCCGGCGTGTTAAACCG 1970 29 100.0 32 ............................. GGCGTAATCAATTTCTTTGTAAATTCCTCAGC 1909 29 100.0 32 ............................. AAATCTTCTTCACAGGGGGACTTCCCTGCTGG 1848 29 100.0 32 ............................. GCCATGCGTGCGTTGCGAGCGTTCCTATTAGC 1787 29 100.0 32 ............................. ATTGATTGTTAATGCGTCATTGAAGCGTGCAT 1726 29 100.0 32 ............................. AAGCTATTGCATTATTTACGAAGTTTGCCATT 1665 29 100.0 32 ............................. TGAATACTGAATCAACCCGGCGTTCAACGCTC 1604 29 100.0 32 ............................. TGATCGAAGATTTCTATGAGGTTCAAGCGAAT 1543 29 100.0 32 ............................. ACTGAGAAACAACCCCAGCCCCAGGAACCGTT 1482 29 100.0 33 ............................. AGTGGCTCCGTTGAGGAGTAGTACGAAATGATT 1420 29 100.0 32 ............................. CGTCTAAGTTGCCCCTTAGGCGGTCATCTATA 1359 29 93.1 32 ..........................G.G GTGATGGGTTCGCCACTGGCCTTCTACCAGTA 1298 29 100.0 32 ............................. ATTTTCGGACATAACTTCTTCTCACCTACCGC 1237 29 100.0 32 ............................. GATTTGTGCCCAGTCGTCGAGGTTCTCCCCGA 1176 29 100.0 32 ............................. GACATCGGAAAGGGTTGGATCCCATGAGCGCT 1115 29 100.0 32 ............................. GAATGCGTAAGGTTTTCGAAGTGTAGTCATAC 1054 29 100.0 32 ............................. GACTTGGAAGGTGCTATCTCGCCGACCTTCCT 993 29 96.6 33 ............................A CCAAAAGCTACTCGGAAGGCGCGTTCTTCGGGG 931 29 100.0 32 ............................. CTCGGCCTGGGCTGGTGTTATAGTTTTTTCAT 870 29 96.6 32 ............................T TAGTGCAGTACCGGAGTTGGCGTACACGGATG 809 29 100.0 32 ............................. GAGATACCGTTCACGAAACCACGGATAACGTT 748 29 100.0 32 ............................. CGTTATCAACATCGAAAATCTGGCTAGACTCC 687 29 100.0 32 ............................. TTTTGGGTATAAAAATATCCCCTGCGCTTTTC 626 29 100.0 32 ............................. ATACTGTAAATTCCTCCTGTCCACTCTCCCGG 565 29 100.0 32 ............................. TGGTGTGCCTGTCGAGTTACTTGCTGGACCTC 504 29 100.0 32 ............................. ATCAGCGAATATTCCCGCCCGTCCAGTGACGG 443 29 100.0 32 ............................. TTGCGAGTCTTGATTGTAGCGCCGATAATCGT 382 29 100.0 32 ............................. TATATCCGAAGGGCTGGATTGTCAAGAACGCT 321 29 100.0 32 ............................. GAGCCACCCCAAGACAACCGTTAAAGAATCCA 260 29 100.0 32 ............................. TGCTTTGGTGCGCGCTGCTGAGCTGATGGCGC 199 29 100.0 32 ............................. ACAGCTTCGAGAATGGCAAGAAGCTGGTCGCC 138 29 100.0 32 ............................. TTAGAAGAACGCACACTAACCGCGCGTGCCGT 77 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 36 29 99.6 32 CTCTTCCCCGCACACGCGGGGGTATTTCC # Left flank : TAGACGCGATTTACGGAGGCAAATTCATAGCAAGCATATATTGGAAGACATGCTTGGCACGCTCATGGAGATCTTAGAACCACACCTGCCGAATCGTGATGATGATCGATTGATCAATGATAATGGTGAAGTTTCTGGGCACGTACAATACGGAAAAGATGATGAGTGATGTTTGCAGTCTTAACAATATCTGCAGTTCCCGAGCATCTTCATGGCTATGTAACCCGATTTCTCACTGAGGTTGAAAGTGGGGTTTACGTCGGAAATATTTCTCGGAACGTGCGTGAACGCCTATGGGAACGTGTGAGTAGTACGCTTGACGAAGGAACTTCTACTATGATTTATAGCGACCCGCGACAAGAACAAGGATTCTCGATGCTCACTGCAGGAAAAAATTCACGAAAAGTATTGGACTTAGACGGTCTAACCGTTGTGTCCATGCGTCCTGGACGTGGAGAATCCAAAATTCGAGATCGTTGAAAATAAAGGCTTTCGTTAGT # Right flank : CACAGCTTCGAGAATGGCAAGAAGCTGGTCGCCCTCTTCCCCGCACACG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTTCCCCGCACACGCGGGGGTATTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [31.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.64 Confidence: LOW] # Array family : NA //