Array 1 36457-35410 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP043762.1 Paenibacillus sp. 37 plasmid pART37, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 36456 33 100.0 33 ................................. ATCGAACACGTAAGAATGCGCGAAGCTACGGAG 36390 33 100.0 36 ................................. CGGACGATTCCGGCAAGATGCGCCGCGCATATACGT 36321 33 100.0 35 ................................. AAACAAAGAGCATATTCAGACTGTTCGCAATTTGT 36253 33 100.0 33 ................................. TATATCGTCTTTAACATCAACCTCATATTGAAT 36187 33 100.0 35 ................................. TATTGCGATTTGGAGTTGTTCGAAGGATGTACATA 36119 33 100.0 34 ................................. ATTACGTTAACATTAGATGCCTGAATGAATACAT 36052 33 100.0 36 ................................. CATGACACGATTGACAGCGAGGGATATCTTGGATGG 35983 33 100.0 34 ................................. AACTCTGACTCCAAATTCTTCCGGGCACTTCGTC 35916 33 100.0 35 ................................. TGTTATAAGTAGGATGTCACACGCAGCCCGTGGTC 35848 33 100.0 34 ................................. CCAAGAAGGTGCGTTATGTATGCGCACACGAGCC 35781 33 100.0 35 ................................. ATCCGTGAAGTAGATAATCGCCTTGGCCTGTCCTC 35713 33 100.0 35 ................................. AAAGTCATGGGAAAACGTGCAGCTCAAGACGGTGG 35645 33 100.0 35 ................................. ACCTTTACGCCATCCGGACGGAATGATGGGAGCTG 35577 33 100.0 35 ................................. TACCCAATCGTTAACTGCCATATCAAACTCTCCTT 35509 33 100.0 34 ................................. TTCGAACTCATGCATTCTTTATCTCTCCTTTGGT 35442 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ==================================== ================== 16 33 100.0 35 GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Left flank : AAAAGTGACGTAGATATACGATACGCACGTAAATGTTGATCAAAAGAGAAGCGCTATGGCAATCGTAAATGTTCCCTTGAACGCAATTGGGGCAGGCCAGCCATAAATAGGTTGATGCATGCATGAGATTTGCTTTATGCGCTTTGATTTTTGGTATAATGGAAGTGTATAGAGATTTGAGTGGCTGTTATGGAATTTCTTGATCCCCGAGTAGATTTTGTATTTAAAGTATCTTTAGCGTTAAAAATACCATTTTAAATCGAGTCCTAACTAAAGTGAGATCCACTACTTAAAGAGATCATTTTAACAGGTGCGAATGCCAAGTTCACATGATTTCCCTGGGGGATTCGCACCTCGAAATTTGTCGAAAAGGTCTTTATTGTGACCTTTTGGCAATGATTTATAGTCGAAAGTTTGTGATAACCGGTTTAAAGTAGTGGAAATATCGGAAATACGTTAATAGTTATTCTTCAAGCATAGTTATTACGTCACTTTTCGCT # Right flank : ACCGAAATGCCCTGGCTGATCTTTTGACATCACCGTCGCACTCCGTTTGGAGTCAACCATCAGTTGCTTTATGTTTAGAGAGTATCCAAACTTTTATTGTTGCTGTTGTACCATTAAGAGATAGCCCTTATGCTACAGCCAAAGTCGATCCTTCAATGGATCGGCTTTATTTTATTGGAGCAATTTAGCGAGTAGAAGATGGAAGAAGATGCACATTCGACCCAACAAGCAGCCCAATTATTTGCTTCATTACAGCAAGGTTTAAAATGAGTCGCACAAAGAGTAGCTTTTTCTTTTACTCACAAAAAAAGGAAACGAGAATGAACATCAGAATCGTGCCAATGCGCAGATTAATGTAACAGCCTATCCCGGGTAGACCTTCAGCCAGGCGATCTTGAGTATGAGAAGCTTCGCCTGGTATTGAACAGATTGGGTATGTGGAACCTGTCGTCTGGAATAAACAAGCGGGGAAGAAAGTCGGGCAGTAATCAGTGCACTGA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.40,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [48.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : NA // Array 2 165864-164546 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP043762.1 Paenibacillus sp. 37 plasmid pART37, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 165863 33 100.0 35 ................................. ATCTTCGCCCACCGTACCCGTTCCTCGTGCCACTC 165795 33 100.0 36 ................................. TTGAAGACGGTCAATACGAGGAGATAATGATACACA 165726 33 100.0 32 ................................. ACTCCTTATTGCGCGCTGCCAATTCGTTGTAC 165661 33 100.0 34 ................................. AAAATCCGTATCATATTATGTGCCGTGCCAGATG 165594 33 100.0 35 ................................. ACTGTATTTTGAACATTGGTATTCACATTTCCCGT 165526 33 100.0 35 ................................. ATTTTATTAAATGCATCCTGCATTGCGTTGTATTG 165458 33 100.0 36 ................................. TTCTGATTGGGACTGACCAATAGACCAATTGGGATA 165389 33 100.0 35 ................................. GGTCTGCATCACTTGCTTGCGCTGCTAGGGATCCG 165321 33 100.0 35 ................................. ACCACACTCAGGGCAGTTGATCCATGTGACAAACA 165253 33 100.0 35 ................................. TTCACCTTTTGTATTGTCGCTGACAATCGGTTAGT 165185 33 100.0 35 ................................. GCACTATTGGTGAAGCTGCTGGATATGGTGTGAGC 165117 33 100.0 35 ................................. TCGAAAACATCGCAAATAAAGGCGTATCGACATTC 165049 33 100.0 35 ................................. ATCTTTGGACTGATGGATCATCTGTAAATGATGGC 164981 33 100.0 35 ................................. ATATTTTCAGAGGGGATCGGGTGGCTCAGCTGGTC 164913 33 100.0 35 ................................. TGGAGCGTGCCGGGTGACTTCAATCTGTATCAACC 164845 33 100.0 34 ................................. TGTTGTGGCGACCGCTGTTTCAGCTACAGGAGCT 164778 33 100.0 35 ................................. ATTGATGTTGCTGTCTTCCAGCCCTTTGATGTACC 164710 33 97.0 33 ......T.......................... TTGCAAGCGCTGCTCCATGTCGTCAGCGAAGCG 164644 33 100.0 33 ................................. CCCTCTCTAGATGATATGTATCCATATTAAAGC 164578 33 84.8 0 ...T.....C...........C.AA........ | ========== ====== ====== ====== ================================= ==================================== ================== 20 33 99.1 35 GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Left flank : GAAGTAGGTGTGATGATTGCTTATTTTGATTACCTATGATGTGAGCACGATAGATAGTGAAGGCCGAAGAAGACTATCTAAAGTGGCGAAAAAGTGTGTGGATCACGGTCAGCGAGTGCAAAACTCGGTGTTTGAATGTATACTGGATGCTGCCCAATTTAGACGATTAAGATTCGAACTAGAAGAATTGATTGATAAGGATACAGATAGTCTTCGATTTTATAACTTAGGTGATAATTACAAAAGTAAAGTCCAACATGTAGGAGCGAAAGATTCCTATGATATGGGGGATCCATTAATACTGTAGCAGGTGCGAATGCCAAGCTCACATGATTTTCCTGGGGGATTCGCACCTCGAAAATTGTCGAAAAGGTCATTTTTGTGACCTTTTGGCAATGATTTAAGGCTAAAAATTTTTAGTAACAGTTTTGAATAAGTAGAAATATCGAAAATACGTTAATAGCTATTCTTGAAATATAGTTATTACGTCACTTTTCGCT # Right flank : ATCTGTTATGTCTAAGAATTTAATGAGCGGGTTATGCCGTACTCCGTTTGGTTAATTGAATTTGTAGGTGAAACAAGGCAAGCTAATGAATGGCTGTCGGTGGCCATGAAAAATAAGGGTTTAATTACGATTTTAATTAATACGAATTACACGATTATAAAAAAATGATATTTAACAACGCCTACCACAAGGGAGTGGCTTACTTTTTTCGCTTATTTCAGTTGCTTTTTTTATGTAACGCCTTTGATGTGGATCTCCTTCAGGAGTCAACACTCCGATATGATTTCCTAAGTGAGTGTAGGTTTCGATTTTCTATGTAATGGTCTTTGAAATAGTAGTTCCTTAATTTATTCCGGCATAACCATTCATTCTACCATTTAAAATGGTAGGCACCCTTAGTTATCAAGAATGGATATTGGATCTCCAGAATTTTACTCCACTCTGCTTCTCATTAACGATTCCTATGTCGAACGTAAAAAAGCGTCGGGGAAAATCTCCGG # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.40,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : NA // Array 3 177622-176715 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP043762.1 Paenibacillus sp. 37 plasmid pART37, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 177621 33 100.0 34 ................................. TGTCCGTTCTGCGGCACCAAGTTGGAATAGAAAA 177554 33 100.0 36 ................................. CTACCATACATGAGCTAATGAACAAGACAGGTAAGG 177485 33 100.0 34 ................................. TGGTAACTCAGTCACATTGAATCAAACGACACTT 177418 33 100.0 34 ................................. AACCGTAGGTGATGAAGTGTCGTCTATAAAGATA 177351 33 100.0 34 ................................. GAGTGTTATTCGTGGTGTTTTTGGTGCGGATTGT 177284 33 100.0 35 ................................. ACTGATGTATCCAACGTCTTCTACTCTTCCATTGT 177216 33 100.0 35 ................................. ATCGATGTCCGGGCCAAAAGCGGTCGGATCGGAGT 177148 33 100.0 34 ................................. AGACTGTGACACATATCTGCTAATCGTGGACCCG 177081 33 100.0 35 ................................. CTCTATTTGATTAGCTCTATTTCCATCAATACCAA 177013 33 100.0 33 ................................. AATTGTTGGATGCAGTTCAGCATGCGCTTAAAG 176947 33 87.9 35 ....T.....A.........T..........G. AGAAGAGTAAAAACATTGTTTCATGGAATAGATAC 176879 33 87.9 34 T......CT...........A............ TCGTCCTGGTTAATGCCGGGCATTGGGTTACGAT 176812 33 78.8 32 A......C.T........C...A.....A...C TGTAGATTGATAGTATCTCTAGTAAAATTTTT 176747 32 75.8 0 .A........A....T.....C...G..-..TC | C [176723] ========== ====== ====== ====== ================================= ==================================== ================== 14 33 95.0 34 GTCGCACTCCGTATGGAGTGCGTGGATTGAAAT # Left flank : GGTAAATTCACCCTGAAGTCTTACAGTTGTAAGGGACAACTATATGTACAAGTTGTAAACCATCCAAACAACGTTGTTTACATATCAATCTACGACGTATACGAGGGGGACATAAGAAGAAAACGACTAATTATTCAACAAATATCCAAGTAGAGAGGTGGTTATCACCGAGGTAAGGAAAAGGGTAGAAAAGATGGATGTGGATGCCCATTATGTGATGAGTATCTCATCCTGCTGCAGGGAGCAAGAACGAACCTCAATTTGCCCTTTGCGAAATGTTACGAAGTTATCTGAAGCAGGTGCGAACCCAAAGCTCACATGATTTCTCTGGGAGATTCGCACCTCGAAATTTGTCGAAAACTTCAGTTTTATGACCTTTTGGCAACAGGGATATTGAGTTTATATGCTGTTGTGGGATATAGTGGAGCTAATATGTGGAAAAAGTATCGGAATTACGTATTAAGGTATTCTAAGCATAACTTGATACGTGTATTTCCGCT # Right flank : CCAAATGGTTTGCCGTTAGTTTGTTAATCTTTAATCTACATCAGAATTGGAGCATCGTATGAATAGACAAGCACCTATTTTTTCGCTGGAATACCTCCCGTTACTCATTCGACTTGAATGTAAGGAAACGACACGTCTGCCCGCATTTCTCGGCTCTACGCTTCATGGTGTGACTGGTTGGGCGCTAACTCGGCATTCGGAATCCTATAGGTATATATTCGAGAATCGCCGATGGGGCGGAGCTGCACAGGATATCGTCAACCCTTATATCATTGAGCCACCCCGGCCAAAGCCAGTTTATGATAAAGGTGATGCGTTATGCTTCAAGCTCATCTTGATCGGAGATGCGGTTCGTTACGCCAAAGATATCGCGACGTCGTTGACTCAGGCACAGACATTTGGAATTGGAGCCGAACGTAAGGCATTCGAACTCACAGACATCTTTCATGCAGATCAGTACGGACCCATTTGGAAACAGGGACAATTGAAGATGAACGCAG # Questionable array : NO Score: 9.01 # Score Detail : 1:0, 2:3, 3:3, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.00,-6.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [24-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : NA // Array 4 185016-183694 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP043762.1 Paenibacillus sp. 37 plasmid pART37, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 185015 33 100.0 35 ................................. CGTCTGGCGATCCGTTAAGCCGGCGCTGTTAATAG 184947 33 100.0 35 ................................. TCCCGGAGGATTGCGTAAAGCTGCAGCGTAGCCTC 184879 33 100.0 33 ................................. ATTGGTAAATAATGAATCGGTGTCACAGTAGTA 184813 33 100.0 35 ................................. AGTACAAGATAGATACCGATAAGGATACCGATACC 184745 33 100.0 35 ................................. CGGTTCGCGTCCCGGTGGTAGATATTCGAATGTGA 184677 33 100.0 35 ................................. TCTTGGGTGTTGTTGCACTGTGATATTGCTTACAG 184609 33 100.0 35 ................................. ACTCTGATCAGCATGAACCCGGATACGATAATAAC 184541 33 100.0 35 ................................. TCTCGTAAAGACCGCAAGCCGGAGACCGTACCAGA 184473 33 100.0 35 ................................. ACAAAAAGGAAAGTACTTTGCATTGAATGAAGGTA 184405 33 100.0 33 ................................. ATAAAAAGGGGAGCAAGAATGAATAGTATTCAG 184339 33 100.0 35 ................................. TCCGAAGTGACGGGCAATGAATGCTGAAGCTATGG 184271 33 97.0 38 ................................A ATCCCTGAACATGATCTGATCAAGCATAGTAGGCATGT 184200 33 100.0 35 ................................. AGTAAAGCAATACTTGCCCTTTTGGGATCAGTTAC 184132 33 100.0 35 ................................. GGAAAACGGTGCAGCGTAATCGCTCATGAATTCCA T [184119] 184063 33 100.0 35 ................................. AGCACGACAATCATCACGATAAACAGTACGAAGAT 183995 33 100.0 36 ................................. ATAGTAAAAGAAGCCACAGATTCAACGGTTGCACTC 183926 33 100.0 35 ................................. CAGTACATGACGCCGCCACTCAAGACGCTAAACGG 183858 33 87.9 33 .........C.......T.A.....G....... CGTGATGGTGCTAAATTGTCGCGTCTACGAATA 183792 33 93.9 33 ......T.........G................ CTCGCTGTAGTACTCACGAGTCTTCTGAGCACC 183726 33 93.9 0 .........C..........T............ | ========== ====== ====== ====== ================================= ====================================== ================== 20 33 98.6 35 GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Left flank : GATGAGTATGTGGAAGTAGGTGCAATGATTGCTTATTTTGATTAAGTACGATGTAAACACGATAGATAGTGAGGGCAGAAGACGGCTATCTAAAGTGGCAAAGAAGTGTGTAGATCACGGACAACGTGTACAGAATTCCGTATTTGAATGTATATGGACGTTACCCAGTTTAGACGATTAAGATTTGAACTGGAAGAATTGATTGATAAGGATTCAGATAGTCTTCGATTCTATAACTTAGGTGATAAGTACAAAAGTAAAGTCCAACGGGTTGGAGCCAAAGATTCTTATGATATCGATGATCTATTAATACTCTAGCAGGTGCGAATGCCAAGCTCACATGGTTTCCCTGGGGGATTCGCACCACGAAATATGTCGAAAAGGTCTTTTTTGTGACCTTTTGGCAATGATTTTATGTCATAAGAGTTTTAAAGTAGTAGAAATATCGAAAATACGTTAATAGCTATCCTTGAAAACTAGTTTTTACGTCACTTTTCGCT # Right flank : ATTGTCCATAATGACCAGTATAATAGGAAATAACTCACATTGAAGAAGTACATTGGAACGGTGAATACCTACTTGTGAGTGAGAAAGTTATAGGACACATGAACATGTAAAACAGCTCTGGGCTTACATGCTGACGCTGAAATCACTAAGCATTAGAAATGCAATTTCAAATAACTTTACTTGGAATGTATATTACCTGATATGAAAAGTAATACTTGAATATTAAAGTAATACATTATAACATAGGTAATAAAGTAGGAGGTAGTAGTGTATGAGTGTGTATGAATCAGGTAAGGTAACTTCAAAAGGACAGGTTACAATTCCAGTTGAGGTAAGGAAACAACTGGGTATAGCTACAGGCGACAAAATCATTGTGATTATCCAAAATGGGGAAGCAAAATTAGAAGTTAGGAAACAGAAAAAGTTAACTGATCTTGTAGGGATCTTAAAGACGGGTCAAGAACATGATCTTCAGGAAGCTAGGAAGTCAGTGATAGACA # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.40,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [21-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA // Array 5 190804-189822 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP043762.1 Paenibacillus sp. 37 plasmid pART37, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================================================================================== ================== 190803 33 100.0 36 ................................. ACCAAATGTCGGATTATAACCGTAACCGACTTAACC 190734 33 100.0 35 ................................. AATCAATCATTTTGCAGACCAAGGATTGGGGTGTA 190666 33 100.0 36 ................................. ACGGAAACGGTTGTCTCCTGGTTCTGAGTGACGACA 190597 33 100.0 34 ................................. TTACCGATTATGATTACAAGCGAAGCATTGATGA 190530 33 100.0 38 ................................. CCCGCTGCATTGCCGTGGGGGAATCCTGGAATTATCAA 190459 33 100.0 35 ................................. TTCTCCAGATACGCATCCTCGATCTGCTCAAGGGT 190391 33 100.0 34 ................................. AACTGATCAGTGGAGAGAAGGGTAAGGAAAACCG 190324 33 100.0 34 ................................. ATCGCAACAGTTAACTAATGCGGAGAGGTTCGCC 190257 33 87.9 35 .................A.A....A.......C TAGTCTTAAATGTTCGCATATGTAATGGGCACCTT 190189 32 93.9 101 .........T.....-................. TAAGTCCAGTATAGCCAATGGAGCTGCCTTACAAAGTTGCAATCTATATGGAGCATGAATTGAAATTCTTGGCTTTATGCAGTTCTTTCCGATAGTAGCGT 190056 33 93.9 35 .........T.....A................. TCCTCCTTCAGCATGTAGCTCTTTCCACCGTTGAC 189988 33 90.9 34 ................G...T...........A TATCAAAGTTTGTGTTTCTTATCTGATGGTATGC 189921 33 90.9 34 ...............AG..........C..... TCGTCCTGGTTAATGCCGAGTATTGAGTTACGAT 189854 33 81.8 0 A........T...........AA.....A...C | ========== ====== ====== ====== ================================= ===================================================================================================== ================== 14 33 95.7 40 GTCGCACTCCGTATGGAGTGCGTGGATTGAAAT # Left flank : TTTTTATTTCTTCTTCTGATAGTTTAAAAGTCTACAATAAGGCCAACCCTTGTTAACAAAATGATAGGGGAGCTGGATTATTGTGAGAGAAAAAACACTTATAAAACCTGCAGGTAATCATAAACCTAACACCACAGTGCCCAACTGGGGAATTAAAAAAATATTAGACCAAAATAAAAAAGTATTGGATCTTCTCAAGAAACGAAAATGAGAAACTTGTAGGACGGGGGAGAGGATAGTTCATCCTTGATCCATTGGTAGTAATGAATTGCGAAAGGCCATGAAGTCAGCTGAAACAGGTGCGAACCCAAAGCGCACATGAATTCCCAGCGAGATTCGCACCTCGAAATTTGTCGAAATCTTCAGTTTTATGACCTTTTGGCAACAAGGATATTGAGTTAATATGCTGTTGTGGGATATAGTGGAGCTAATATGTGGAATAAGTATCGGAAATACGTATTAAGGGATTCTTAACATAACTTAATACGTGTATTTCCGCT # Right flank : TGTACATTGATATTATCTCTAGTAAAATTTTTGATGCACTCCATATGTAGCGACTCGGGTTAATTCCGAATGGCTTGCCGTTAGTTTTGTGATCTTTGATCTATATCGGTATCGTATAAATAGACAAACACCTTTTTTTTCGCTAGAATACCTCCCGTTACTTATTCGACTTAAACGTAAGGAAACGACACGTTTGCCCGCATTTCCCTGCTCTACGCTTCATGGGGTGGGCTGCACAGGATATCGTCAACCCTTATATCATTGAACCACCTCGGCCAAGGCATTTTATGATAAAGGTGATGCATTATGCTTCAAGCTCATCTTGATCGGAGATGCGGTTCGTTACGCCAAGAATATTGCGGCTTCGTTGACCCAGGCACAGACAGGTGGTATCGGAGCCTAACGTAAGGCGTTCGAACTAACAGACATTTTTCATGCAGATCAGTATGGACCCATTTGGAAACAGGGGTACTTTGAGATGAACAGAGCTATACCTGAAA # Questionable array : NO Score: 8.61 # Score Detail : 1:0, 2:3, 3:3, 4:0.79, 5:0, 6:0.25, 7:-0.43, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.00,-6.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [16-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : NA // Array 6 194636-193317 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP043762.1 Paenibacillus sp. 37 plasmid pART37, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 194635 33 100.0 34 ................................. TTAACAATTAAACAATGCTGTTTCAATATGTATG 194568 33 100.0 35 ................................. TGATCTGAACCTTACGATGAACTTGCGGTGCGATT 194500 33 100.0 33 ................................. TAATACAGCATAGTGTGCTTCTCTTTCCTCTGC 194434 33 100.0 36 ................................. TCGTTACGAGTCCGGGTAATACTTGCCCACTACCTT 194365 33 100.0 35 ................................. TGCTGATGAGATTATACAGGAGGGCAAGAGCCTGA 194297 33 100.0 35 ................................. CGTCCAGGTACACCCTATATCCGTCCAAATCATTT 194229 33 100.0 35 ................................. AAGCCAAAGCTACAGAAGCGCGGCAAGAGACACTG 194161 33 100.0 34 ................................. CCGCCAGATTAAACGCGTGTTTATCGTCGAGGCA 194094 33 100.0 33 ................................. TCCCGCCAGGTATTCGAAGGAGTCCGTAACCTC 194028 33 100.0 35 ................................. CGTGACCCGCAGCGCGGTTTCATTCCAGTTCGAGG 193960 33 100.0 34 ................................. TGATAAAGGTATGACGTTTGAAGAACTTAAAGAT 193893 33 100.0 35 ................................. CAAGCACCGGTGAACACGCTCTTGACGACATTGAA 193825 33 100.0 35 ................................. TTTGAAGAGATCCCGAGTGCCTGCGCGATGCTGGC 193757 33 100.0 34 ................................. ACGTTAAAGTTTGCCTTATCTTTTGGAGCACACT 193690 33 97.0 34 ......T.......................... ACCGCGCACATCAGATGCAAGAGAAGCTGAAGCG 193623 33 84.8 37 ......G.TT.....A.....A........... GTGATGTTGGCCCGTTTGGACTTCAGGTTGTCATAAC 193553 33 93.9 35 ..........T.........T............ TTCTGGATCAAGGTCCATCAGGTCATAGTCGTCAA 193485 33 93.9 35 ........TT....................... CAGGCTTCGTTGTATTCATCCGGGTTTTTAAGCTC 193417 33 97.0 35 .........T....................... TGCTGCTTGCTGGGATTGAAGGTGTTGGTGTCGCA 193349 33 93.9 0 ................G...T............ | ========== ====== ====== ====== ================================= ===================================== ================== 20 33 98.0 35 GTCGCACTCCGTATGGAGTGCGTGGATTGAAAT # Left flank : ATTACAGGGTTTATTTCACATCCTTCCTGATGTTTTAAATGAGGAAAGTACGACAGTCGTTTATGAATCTCTGCTGCCACAAACAGAGGTGTCTGAGGACATAAAAAGGAAGCACTTGGAATTCGTTCAACATCGTAAAGATGCGTAGTGTAAAGTTAAATCAGCTTGAATCCAGTTTGCGAAGGATTCACGTGATGGGTTCCAAGGTATGAAATAGTATGCGGAAAGGAAGTATGCTTTCTATTGTTTGGCTCGAGGGAAGCTATGTTATAAGCTACTTGGATAATCGCCAGGTAGAGGTGCGAATGCCAAGCTCACATGATTTCCCTGGGAGATTCGCACCTCGAAATTTGTCGAAATCTTCAATTTTGTGACCTTTTGGTAACAAGAATATTGAGTTTATATACTGTTGTGGGATATAGTGGAGCTATTATGTGGAAAAAGTATCGGAAATACGTATTAAGGTATTTTAAACATAACTTGATACGTGTATTTCCGCT # Right flank : AAACCACCGATGATTAGTCGCCTAATCTTCTGCAACAATTGGGCGTCTGATTCTGCTTGGAACGTTGGTGGACGGGGACAAGTATTACAGAACCTGTGCTTTATGGTAATTGTCAAAGCATCAGTGAACTGGTGTTTCTGATTTATTGATGGTTCCCCCAGAACAAGACTAACGAACAGGTCTTCGCTCGGAGAGCTTGGCTTTTGGTCTTCAACAAGATTGCCTTCGTCCGCTTTGTTCCATTTGAGGATGGGGAGCATTATTCCTCAACGATAAATTCATCTACAGAATTATTCAGAACAAGGATACGGTCGTTCAGTTCTTGCCAGTAATTATAATTGCTAAAAGAAGGTGTTTTCTTCCAATCCAAAGTATTCTTCGCTAAAAGCTGATTCAGTAGATATATTTTTAACTGTACTATCTCCTTTAATGTAAGGCTTGTAAGGTATTTACTATGAATATATTTGAGAGCGGGGTAGCAAGTATCGACACTTTTTTAA # Questionable array : NO Score: 9.16 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.00,-6.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [13-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.18 Confidence: HIGH] # Array family : NA // Array 7 275211-275376 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP043762.1 Paenibacillus sp. 37 plasmid pART37, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 275211 32 100.0 35 ................................ CCCTAGACACACCGCTTACTGTCATACGGAGATAC 275278 32 100.0 35 ................................ ATTTTGAACAACATAGTACAACGGATTTGTTCCTT 275345 32 90.6 0 .T......T..............A........ | ========== ====== ====== ====== ================================ =================================== ================== 3 32 96.9 36 GCCGTACTCTATATGAGTGCGTGGATTGAAAC # Left flank : AATGTGTTTGTCCATTAGGTATGCTTTTTGATTAGCTTCTATTAGGATTTGTCATTATAATATAAAAGGTACGCGAGGGAGCAAATAAGTTATTAGTAGAAATTAAGATCGGTCCAGACAAAGTGGAGAAGGTAAGTAGTAGATTTGATGAAAGAATTTCATTTAAATATGGAAGATATACTACATATATAAATTTCAGCCTCTCACTTAGATCCCTGATTGATAACTCGTAGTTATATTTTTCAACAGTGGATCTATGCCATGGGTGTATATAAGATGATTTATTACCAATAAAGGAGATCAGGTTTTACTGTCGAAACTAAATTTGAGGTGCGAATGCCAAGTACACATGATTTTCCTGGAAGACTCGCACCTCGAATTTTGTCGAAACGATGTTATTTGTTGCCTTTTGGTAATAATATATGATTATTCTCATTACAATAACACAGAAGCACGTTATTAATTTCTTTTATTATGCTTGTATTACGTCATTTTTAGTA # Right flank : CCATAGCACAATTCACACAATATCAGGCTCTTGCAGAGGTCTCAGTCTATGTGGTTGACAATATACACCCTTACCCTTTATATTAAGTATAATTAAATCAAATATGATCTTTTATCAAAGGTCACAAAAGCGAAGCACGCTTAATGCCATCAGGCATTTTGCGTGCTTTTTTTGTTTGGATTTGAAAGGGGTGAGTAGTGTTGTAAATATTCTAAAATATAATAAAGATATCCATTTCTTCCGATATAAAATTATATTGTTCAATATTCGCGTTCCTTTTTGACTTCTAATATGATTGAAGGAACAGGAGCTGAGTTCATATATCACTCAGTTGAAAATAATTTAATGATGGAGGAAAAAATTAATGAAGAAGATGTTTATTTCAGGAGTTACTGCTTTAGCTTTGTTGACTGGGGGCGTTGTAGGTGTAGGAGGTGTAGGGAGCTCGGTAGAGGCAGCTCAAACTACCCTGAAATTCAAAGACGTTCCTTCTACACACT # Questionable array : NO Score: 8.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.85, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCGTACTCTATATGAGTGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.67%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.80,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //