Array 1 40790-44926 **** Predicted by CRISPRDetect 2.4 *** >NZ_MWUM01000034.1 Zoogloea sp. LCSB751 NODE_34_length_48412_cov_49.7515_ID_67, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 40790 37 100.0 37 ..................................... AAAATCTCTCGACTGACGGCAATTCGCAAGGTGAGCG 40864 37 100.0 34 ..................................... GCCAGCGCAGTGGACAGGCTGGACGTGAGCGCTT 40935 37 100.0 35 ..................................... CACCAGGCCGGCAACGTATCCATCTCCAGAACCCG 41007 37 100.0 37 ..................................... TGCGCCCGGTCCCTTGGTATGAACGTCGCCCCGCACC 41081 37 100.0 34 ..................................... ACCAAGCTGCTGAACGACACCGGCCTCGGCAATC 41152 37 100.0 36 ..................................... CTTCCATTCCCGGATGACCAGAACGCACCATCTCGT 41225 37 100.0 35 ..................................... GCGAATTCGTCATCCTCGTTCTGGACGTCAAACAC 41297 37 100.0 34 ..................................... GCGAAGCCGGCGGCTTGCTTGGTGATGACTACAG 41368 37 100.0 35 ..................................... ATGTAGTGGGCGAACTCGCAACCTTCAGAACAAAA 41440 37 100.0 34 ..................................... GTCTGTGATGTAGCGCCCGCGCGACCTGGTCTTG 41511 37 100.0 35 ..................................... GGCAGGTCTCTAGGCACAGCGCCAGTCCTTCACCT 41583 37 100.0 34 ..................................... TTCTTGGTCAGCTTCAGATACTCCTGAAACGCCC 41654 37 100.0 34 ..................................... TTCTTGGTCAGCTTCAGATACTCCTGAAACGCCC 41725 37 100.0 34 ..................................... TTCTTGGTCAGCTTCAGATACTCCTGAAACGCCC 41796 37 100.0 34 ..................................... ATAGTTGTCTCGCCCATCCGGGCCAACAATTCCC 41867 37 100.0 34 ..................................... CCTTTGCGCCAATGTCAAATGCCAGCTCGACAAG 41938 37 100.0 34 ..................................... ATGTGTCAGTGCCTCGTGCACGGGGAAAAAATGG 42009 37 100.0 34 ..................................... CGGCGAATTGGCGCAGATGATCGTGGACGAAGTG 42080 37 100.0 35 ..................................... GATCCGACCAGGTGAATACCCTGGTCACGGCAGCG 42152 37 100.0 36 ..................................... CATCGAAGCATTTGATGAACAGGCATTCGCATGCCG 42225 37 100.0 34 ..................................... ACCATGGACACGGCGAACGAAAAGACCACGCGGG 42296 37 100.0 36 ..................................... GCCCGCTTGCGCTCCGTAAAAGTCAATTTGAACGTC 42369 37 100.0 35 ..................................... CTTGCCGTAATCGATCACGGAAACATCTTTGCCCT 42441 37 100.0 34 ..................................... CTTCTGCGCTACGCCCTGGCCAAGCTGGCCCGGT 42512 37 100.0 34 ..................................... ACCGACCCAGGGCACCTCCACGTCCGCCGTCAGA 42583 37 100.0 35 ..................................... GATTTGCTTGGCGTTGAACTGCTGCGCTTCGAAAG 42655 37 100.0 35 ..................................... CGGTCGTCAGCGTGATATCGCCGCCTGACGTGCTG 42727 37 100.0 34 ..................................... GCTGATTTCTGGCTGGCCTGGCCGGCGGGATCTC 42798 37 100.0 37 ..................................... TTGGACGTGTACAACAACGTGAACAACATCGGTAGCG 42872 37 100.0 36 ..................................... AGCTTGTCGCCCGCTGGCCCGCCGTCGTAGCCGAGC 42945 37 100.0 35 ..................................... GCCATGTCGTTCGCGGACGTGGTGTTGAATTGCTG 43017 37 100.0 34 ..................................... TTTTTATGGATGGCGATCAGAGTAGCGCATCGTT 43088 37 100.0 34 ..................................... TTTTTATGGATGGCGATCAGAGTAGCGCATCGTT 43159 37 100.0 34 ..................................... TTTTTATGGATGGCGATCAGAGTAGCGCATCGTT 43230 37 100.0 35 ..................................... ATCCGACGAGTTGTGCAGTTACTAAAGTGATGCCC 43302 37 100.0 35 ..................................... AACGCCAAGCAAATCGAAGAAGCCACTGCGGTCCT 43374 37 94.6 35 ......................T.............G GCCGATATCCGCGATATCGAGCCATTGCTTGGCGG 43446 37 97.3 36 ...A................................. AAGAAGAGCGATGGGACGGTAGGCGCCGCGCTGCGG 43519 37 91.9 35 ...A...............A................G AATACGCTGCAGCTCGAAAAATTCGGCAATTCCGT 43591 37 89.2 34 .C........T....G....G................ AAGCCCGCGTACCTCAAGCCCAAGACTCCGTTTG 43662 36 86.5 36 ...A...........G..A.-...............G GGGTAAGACAAACGATTGGCAGCTCGATCCGGTGTT 43734 37 91.9 34 .G..............C.....T.............. GACGAGTTGCACGCGCAGAAGTCCCGTGACGTAT 43805 37 89.2 36 ......T.............C.....C.........T AGCCAGTAATACTTCCCGAGGACCGACTGCGTCTCC 43878 37 89.2 36 ...A...........C................A...G GGGTAAACCAAACGATTGGCAGCCCGCCTCAGTGTC 43951 37 83.8 33 A.A............GT.........C..A....... TTTGACGCATGGGTCGGCCAGGCACTGAATTAC 44021 37 81.1 35 ...A....T.T....T.C.....T............T ATCCGTAGGCACGACGCCAGCGTTTGCTTGGGCGT A [44044] 44094 37 89.2 34 A..A...........G....................A GGCTTGCGATCGACGATGCGCACATACTCCTGGC 44165 37 91.9 34 ......T........GG.................... AGCCCAAGGAAGCGAGACAGCCGAGCCGGCTTTT 44236 37 97.3 35 ...............G..................... GTGAAATACGGATTGGTTTGCGTCTGGGTGCCGCC 44308 37 81.1 35 ...AGG..T......G......T.............G AAGTGGCAGCAGCTTCAACTGGCGCGCCAAGCCGC 44380 37 89.2 34 ...AT.T........G..................... TTGGTGTCGAAGTCGTAGTTAGAGGCCTGAACAG 44451 37 97.3 35 ...A................................. AATGCGGACAAGGCCGAGGAAATGAAGGCCAGCGT 44523 37 94.6 36 ...A................................G GGGTAAACCAAGCGATTGGAAGCCCGAGCCAGTGTC GAGCGA [44542] 44602 37 91.9 34 .A.A...........T..................... CCCGAGTTTCGCGGGCGGGGCCTGGGGCATGAGC 44673 37 89.2 35 ...A........G..T.A................... TCTTCATGGCACGGCGGACGTGTGCAGACGTTTGC A [44681] 44746 37 89.2 36 ...A.G.......T.G..................... ATCTCCATCGGTTTCACGGTCACCTCGGAAAGCAGG 44819 37 81.1 34 ...A......T...CT.....T.....G........G AACTGGGTTCAAGCTAAGTTGCTTGAGGCTATGT 44890 37 91.9 0 ...................A..........C..G... | ========== ====== ====== ====== ===================================== ===================================== ================== 58 37 96.2 35 GTGGCACTCGCTCCGAAGGGAGCGACTTCGTTGAAGC # Left flank : CATTAATGGCTCCGCATAATCGATTCGTATACCCGAAATGAGTATAGTCCCGACGCGGAACAATGTGGACTCTCTTCAGCCCCCAGAATGTCAAAATGTGAATACAGGGTCGTGGCGCGATTTTGCGGGGTGGGGGCACCCTGTGGGCATCCGGCCCTCCGATCGTGGAAAGTAACGGGGTAGTAACGGGGTCTGTGGGGCTGTCTGCGTTCAGACGGTGGGTGAAGAGTGCGGCGGAAGGTCGAGGCAGCGGTTTCCGGGGTGAAAGGGGATTCCGGAGGGCACCGAAAGGGCTGACAATCGGGGGCGTTGGAAAGCAAGCTGGTTTGAGCTTGCGCGAACCCCAAGTGGACGGCGCGAGGCCGGGAGGTTCGCGCGGGGGCCGCGCATTGATTCTACGGGTGTGGTTGGAGCGGGATCGTGAAAGCGATGAACGTCTGCGAGGGGTTCGCGCGGTGCAGGGAAATCCGGCAGGGGAATCAATCGGGTATGGCTGAAGT # Right flank : CCCGCGGAAGGATATGGGGTGGTCTTTCGCATTGAGTCAGTTACGATAACGGAATACCCTGTGTGCCGATTTGCATTGGTGAGTAGAGACTTCAATGGGGAGCGAACAGGGTATGACGCGGCGTGGCAGGGGCAGAGCGGCCAAAACGCTTCCACTGGCGCAAGACTACGAAGGGAGCCCAGGTTACCGGACCAAGGATGGCGCGCTGGTTCGTGAACTGATGCACCCGGTCGCGCACGGCATTCAATCCCAGAGCTTGGTCGGTATCCTCATCCCGTCAGGCAAACGCACCCTCCGGCATCGCCACCAGCGGGCCGAGAAGGTTTATCACGTCACCGAGGGACGGGGCTGGATGATGATCGACGAGGATCGAATCCAGGTCCAACGAGGTGACACGATCGGCGTGCCAGCGGGCACGGCGCATTACGTCGAGGCCCATCGTCTCCACTCACTCCAATTACTCTGCTGCTGCGTGCCGGCCTACTGCGCGGACGACGTTG # Questionable array : NO Score: 3.07 # Score Detail : 1:0, 2:0, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGCACTCGCTCCGAAGGGAGCGACTTCGTTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.00,-11.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-88] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 41801-29145 **** Predicted by CRISPRDetect 2.4 *** >NZ_MWUM01000011.1 Zoogloea sp. LCSB751 NODE_11_length_165949_cov_57.1497_ID_21, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 41800 37 100.0 35 ..................................... CCTTGGTCCCGCGTGCAGCGCCTTGGCGCGTCCAC 41728 37 100.0 34 ..................................... GTTCGACTATTCGGATGTAGTAGCGGATATCCAG 41657 37 100.0 34 ..................................... GACCGTGCTGCTGCCTTGCGCCGCCTCGAAGCCG 41586 37 100.0 35 ..................................... AATTAAAAGGGGCAGGAGCTCCCGGTGTGGTCGCT 41514 37 100.0 36 ..................................... GTCATCGTGGCGGCCCTCTCCGGCGTGGTGCCCATG 41441 37 100.0 35 ..................................... TTTCCGAGCTGTCGCGAATTGCCCTTATCCGGCTG 41369 37 100.0 35 ..................................... GTGTTCTCAGGCCGTGATCCGAAGAAGTGCATGAG 41297 37 100.0 37 ..................................... AAGACCGAGCTCTGTAACGGGTTCGACCCGGCCCAGG 41223 37 100.0 34 ..................................... CTCAGCCATCCGGCGATTGCGCTCGCGCTCTTCG 41152 37 100.0 35 ..................................... CTCGCGGCCTGCATGGCAGTCCAGCCCCAGCACAG 41080 37 100.0 35 ..................................... CTGCCACGCCGTGTCCAACAGCTCGATGTCCTCGA 41008 37 100.0 37 ..................................... AACCTGCGACATGACGGTTAGGCAGGCTTCGGGGAGG 40934 37 100.0 35 ..................................... CGCTATGCCTGCGCGGCCGATCAAACAGTCGGGAA 40862 37 100.0 36 ..................................... TTTCGCTAGTCCACAATGTCACCGCAGCACCGATGA 40789 37 100.0 35 ..................................... TGTGGACTCCCAGGCGCCGCCGGACGGCCCTGATG 40717 37 100.0 34 ..................................... ATGAAGGATCTGGCCGAATCCGGGAAGCTGGTCA 40646 37 100.0 34 ..................................... AGGTGGTAGCCATGCTGGCGTTGACGGTCATGGC 40575 37 100.0 35 ..................................... CGCCCGAGCTGGAAAACGAGGCACTTCGCCAGTCC 40503 37 100.0 34 ..................................... CGCCTGACGCCAGCGACGACTACAGCGCTGCGGT 40432 37 100.0 35 ..................................... TCGGTGGAGGCCGAGCAGTCGGTGGTCGGAGCGTT 40360 37 100.0 36 ..................................... AGGACCGTAATAAGGGCAACAAGCGCCACAACCAGA 40287 37 100.0 35 ..................................... AGCTTGTTCGCGACTGGCTCGCGAAAGACTGATTG 40215 37 100.0 36 ..................................... CGCATCAATGGCGGCCAGTATTCGATTGAGCGCGTG 40142 37 100.0 36 ..................................... TCACCGAAGCCAACGCCGACCCCAACGCGCCCAAGC 40069 37 100.0 38 ..................................... AACACCACGCAGACGATGGTGATCGAGCTGGGCGCCGG 39994 37 100.0 36 ..................................... TCGAGTACAGTAGCACCGATGCGCTGCACACGCAGC 39921 37 100.0 35 ..................................... AAAGCTGTGGCCGACAAGATGGCCGAGTACAAGGA 39849 37 100.0 37 ..................................... GGACGCCTGCTGGGCCTGCTGCCACAGCGGGTACATT 39775 37 100.0 36 ..................................... AACCGAGTAGCAGGGGCTGCCCCGTGGCCGACTCCG 39702 37 100.0 35 ..................................... GCAACCTGCTCGCCCAACTCCCGGTTCGCCATCGC 39630 37 100.0 35 ..................................... AAGTGGCAGCAACTGCAGCTTGCAAGAGAGGCTGC 39558 37 100.0 35 ..................................... CCGCTGGGTCAACGAACCCGATGTCTACGTCACCG 39486 37 100.0 35 ..................................... CCTCTCGTATCGTACTTGGCGACAGGCCTGCGCAC 39414 37 100.0 36 ..................................... CGCTGGTCGGTATTGCCTTGGATTCGCCCGTCAAAG 39341 37 100.0 35 ..................................... AACCAGGCCGGGCAACGGTTCCAGCAGCTGCAGCT 39269 37 100.0 37 ..................................... AGGTGTCCACCGAGGGCAATTACTACGCGAAGGACAT 39195 37 100.0 35 ..................................... TCGACGAGATGCCACATTGCAAAGGCGCTTGTGAG 39123 37 100.0 35 ..................................... ACCCGCGACAACGGTCTGTGCCAGGAGTGCCTTCG 39051 37 100.0 35 ..................................... TTGTAGATCGCTGTATATAGGAGGGAAGGAGAATC 38979 37 100.0 34 ..................................... GCATCGCCGATGCCGTGCTCGACGCCGCACCCAT 38908 37 100.0 33 ..................................... ATTGGGTCGCTTAGGTAGCGAACCTGCTGTGGG 38838 37 100.0 38 ..................................... GATACCACCGCCAGGTTTGAGGCGTTGGGGGTGACGCC 38763 37 100.0 36 ..................................... TGCAGCTGGCACGGGTGTCAAAGCCCGGTCGCCGTC 38690 37 100.0 35 ..................................... TTGTTTGTGATGCGGCCAACCCGAGCGACGCAGCG 38618 37 100.0 36 ..................................... GTGGTGCTGCCGCAAGGTGGCGGCGGCGGGTCTGAC 38545 37 100.0 37 ..................................... TGGAAAGGAGGTGATCCCTATCTCGTGGCCGTCTCGG 38471 37 100.0 35 ..................................... CACCTCTGCCTGGACGAGGCGTGCCCACGTCTGGC 38399 37 100.0 35 ..................................... ATACGTGTGGTTATGAATGACGGTTTCGATGGTCT 38327 37 100.0 34 ..................................... CATCCCAACCCCGTCCGTGAAAATTGTGTCCAGC 38256 37 100.0 34 ..................................... GTGAGGGAGGCGATAGCCTTGTCGATCCCAGCGC 38185 37 100.0 35 ..................................... CGGATATCGGCGCTGATCTTGTCCTGGCGCACATT 38113 37 100.0 34 ..................................... AATTCTGTGCTCCATAGAAAAACCCGCCGTCCAA 38042 37 100.0 35 ..................................... GCAAACTGCTGTCGGTGAAGCATGGGTCAATATTG 37970 37 100.0 37 ..................................... ATAACTTGAATATTAATCGACACTCCCGAGGCGGCGA 37896 37 100.0 35 ..................................... CGCACAATTTGAACTTGAGGCTCAAATTTTCCAGT 37824 37 100.0 35 ..................................... AAGAAGGGCGGCGGAAGGATCAGCGCCCGTGTCCA 37752 37 100.0 36 ..................................... ATTTAATTTGCTCCAAAATTTTGCCAAATGTCGGAA 37679 37 100.0 34 ..................................... GTCCGCCATATCGCTGGATACGCGGCGCAGGCAG 37608 37 100.0 34 ..................................... ACCATCGATATCTCCGACCCGCTACGGGCCGACT 37537 37 100.0 37 ..................................... CATCAACAGCCAGCTCGAAGCCTGCTGCGAAGCGCGG 37463 37 100.0 35 ..................................... TCGGTGTCCGATGTGCAGGGCAACCAGATCGTGGC 37391 37 100.0 35 ..................................... GAGACCTGGGCCATGAAGCGCGGCCACGAGCTGGA 37319 37 100.0 39 ..................................... CTGCTCGGCTGGATCAATAGAACATTGGAGGCATTGCAA 37243 37 100.0 37 ..................................... GCCGTAGGGCTTACGAAAACTCGGCAGTCCGTTGAGG 37169 37 100.0 36 ..................................... CGCACGCTAAAAGCGGAAGACGCTGTCAAGAAACAC 37096 37 100.0 38 ..................................... GTCCTGCAACTGGCGAGGCATGTCGGCAACGAAGTCGC 37021 37 100.0 34 ..................................... GCCCGTCAAAGCGAAGAAGAATCGCGTGCGCGAC 36950 37 100.0 34 ..................................... AGGTTGCGGTTGCTGGCCACCGAGGAGCTCGAGA 36879 37 100.0 35 ..................................... GTGACAAGAAGCACCTGAAACAGCACTTGGACTAC 36807 37 100.0 34 ..................................... TCGTGCTGCGCGGTTGCCTTGGCTTCGGTCTGGC 36736 37 100.0 34 ..................................... ACCTTGATGTCGCCCCAGCCCCGGGCATGCGCGA 36665 37 100.0 34 ..................................... TGTACTCTGTTACTACACTGTATCTCTTAGCATA 36594 37 100.0 38 ..................................... TACAAATATTCTTAGTGCTAGTGCAGAGCAATGTAAAT 36519 37 100.0 36 ..................................... GGGATCGGCTCATCGACGATCATCACGCGGCCTCGG 36446 37 100.0 34 ..................................... GTCGAAGTGATCCTGCTGCCGACCCGCAGCTGAT 36375 37 100.0 34 ..................................... AGTGATGTGTGGCCCGATGAGCATGGGCGACAGC 36304 37 100.0 36 ..................................... TACGTTAAGACCTGGCTGTCGATGGAAATCCCGGAT 36231 37 100.0 35 ..................................... CTACTGGGACTGCGCCGCTGGGGTACGACTTCTAC 36159 37 100.0 35 ..................................... TCCCGCAATGCCGTTGTCTACGCGCTCCCGAACAT 36087 37 100.0 37 ..................................... ATTGCACAGGACGTGGCGCCGCTCGTCGATGGCGAGG 36013 37 100.0 34 ..................................... TCTCCAGTTTTTTGTTGAGCAGCGAGGTAAGTAA 35942 37 100.0 35 ..................................... AGGTTCAGATGCTGCCGGTCACGCTCCTTGACACC 35870 37 100.0 36 ..................................... CGACAATTGACACGACATCGGGTTTGCTGACCGTTG 35797 37 100.0 35 ..................................... ATTGCTGGCGGATCCAGAACGTGCAGGAGCGGCCG 35725 37 100.0 35 ..................................... GCCAACTAGCTCAATATATCCATCTCCGACAGGAT 35653 37 100.0 34 ..................................... ATCACTTCGGCGTCTAGGGCGAAGCTTATGCACG 35582 37 100.0 34 ..................................... CATAATACACTTTCGCCACGGCATAGTTTCTTTA 35511 37 100.0 37 ..................................... TTCCAGCTCGCTCAGCAGCTTGGCCAGATCCTCGCGG 35437 37 100.0 38 ..................................... CACGACGGTCTAGGCCATGGCCAATAGAGCGGCGGAAG 35362 37 100.0 37 ..................................... ACCTCGGACATCACCCGCATCTCGCTGGTGGCCGGGC 35288 37 100.0 34 ..................................... ATTTTTAATCATCGCAGAAAACTTTTCGCCCTTA 35217 37 100.0 35 ..................................... TACAAGAGAGCCGGTTTCTTCGGCTTTGGCGACGA 35145 37 100.0 37 ..................................... AAACAGATAGCGCCGCTGATCGAAAATTTTATCGACA 35071 37 100.0 35 ..................................... TTTTGAAAAACGACATTTTTGTCATTCAAGAAAAC 34999 37 100.0 34 ..................................... GAGTTAATGCCAGCAATGGCCTGCGCAGTATTGC 34928 37 100.0 34 ..................................... TTTATATCATCCAATTCCAGCTTGGCCCCTTTTG 34857 37 100.0 34 ..................................... CCTTTTCGGTTCGTCACATGAAATAAGAAACTGA 34786 37 100.0 35 ..................................... TCCAAATCCCTCATCTTTAACCCTGATTTTTACAA 34714 37 100.0 34 ..................................... AAAAATGCGCAATAGCTTTCCTCGTCCCCCGGTT 34643 37 100.0 35 ..................................... TGATAAGCTGCGAGAGGAATAGGCATGATTGCATA 34571 37 100.0 35 ..................................... ATGGTGTTATTTTCAAATACGCGAACTCCGATAGT 34499 37 100.0 36 ..................................... AAAATCGCCTACAACAGAAACGGCAGGAATTTGTGC 34426 37 100.0 33 ..................................... CATGTAAGCTGTAAATTTTAATGCCTAGCCCTC 34356 37 100.0 35 ..................................... TGCAATCCGCCCCGCGCATGCGCAAATCGCTAGGC 34284 37 100.0 34 ..................................... CTGACGGGGCAGGCGCTTGTCTCCAGCCTGCTCA 34213 37 100.0 35 ..................................... ACGGTCATTTCATGCTGGATCGGGGCCGACTTGTC 34141 37 100.0 37 ..................................... AGCAAATGCCTGCGCCCACACCCCGCGAATAACTTGC 34067 37 100.0 36 ..................................... GTGCCCAAGCACAACGACCTGCTCGACCAGCTCCAC 33994 37 100.0 34 ..................................... TTGTAACGGGGAGCAGAAAACCCTGCAGCGGCAA 33923 37 100.0 34 ..................................... TACAAAGGAGGATGGTCCCGCAGCAGGCCCGGAT 33852 37 100.0 36 ..................................... TCTTCGTCGGTGGCACGCACAGCCGCGTCAACCAGC 33779 37 100.0 35 ..................................... ATCATTTTCTCCGTTCTCCGCCTCGCAAGAAGCAG 33707 37 100.0 34 ..................................... CTGCACAGCGTCGAGAAGATCCACATCGTCGGCT 33636 37 100.0 35 ..................................... ATGATTGCCTCGCCCGTCATGCTTGACCTCTCGAA 33564 37 100.0 35 ..................................... AGCACCAGGGCCGTCAGCTGATCCGAGTGCGGTGT 33492 37 100.0 34 ..................................... TGGTATTGCCGCGTCTCATCCGCCCCCGGCTCAA 33421 37 100.0 36 ..................................... AGCTGCCCCCCTTGCTGAAGCATCACCATCATCGGC 33348 37 100.0 35 ..................................... CAGGCTTTCGAGCTCCAGCATGTCGTGGTGGCCAG 33276 37 100.0 34 ..................................... CGATGGAGGCGTCGCAAAGAGCCATCACGCAGTC 33205 37 100.0 35 ..................................... GTTGCCAATGCCATCTGGACGACGGGCGTGCCGTG 33133 37 100.0 35 ..................................... CCGGCAATACGCTGGAGCTGGTGCACGGCCATTGC 33061 37 100.0 34 ..................................... AGCGGGCTCTCGATGAGAAGAAGAGCGTGCTGAT 32990 37 100.0 33 ..................................... TAGGACCCCGCATCCAGACAACGAGATCGAAGA 32920 37 100.0 36 ..................................... CAGGCCGGAGACATCGATGTTACCCAACTCACCGAT 32847 37 100.0 35 ..................................... CTGCCACAGCTCATCGGGGTCCGCCAGGTCTGCAA 32775 37 100.0 35 ..................................... TTTTTGCATCAATTGCGCTGGGCGCGGCCGGCTGG 32703 37 100.0 34 ..................................... ACATCGACGACCAGTTGTTTCATGGCCTTGCCGG 32632 37 100.0 35 ..................................... TGCGCAAATAGGCGGAACGTTGCAAACAGTCCCTG 32560 37 100.0 35 ..................................... GGACACTCCGGTTGAATTGCCGGTAGTCGCCATGC 32488 37 100.0 35 ..................................... GGCTCAGCGGATCAACGGCGCAGGAAGCCTCAGCA 32416 37 100.0 34 ..................................... AAGAGGTTCGGACCTCGATCAATGGCCTGATTAC 32345 37 100.0 34 ..................................... TCCTGAAACTCGAACTGCCGCGCAGCCTCTTCGC 32274 37 100.0 34 ..................................... CGATCTCGGCGCACCCAGCGTGCGGGCTGTCGGG 32203 37 100.0 36 ..................................... ATCACATTCCTTGCTGCTCAGGAAACCATCCGAAGC 32130 37 100.0 34 ..................................... CATAGAATTTGATTTTATTACACCGAGGGAACGA 32059 37 100.0 35 ..................................... CGCTTTGAAAACCCGGGCGTACTGGAGCCGACAAC 31987 37 100.0 37 ..................................... ACAAACAGCGCGGCACCGACATCGTCGCCTACCGCGT 31913 37 100.0 35 ..................................... CGTCGATGGGCATGGGCACTGCTTTCTTCATGGCG 31841 37 100.0 36 ..................................... GACGACTGGAATAAGGGTCGTGTGGGTGCCGCGTTT 31768 37 100.0 36 ..................................... GAGCTGGAGCCCACACATATTCGATCGCTACGCGGG 31695 37 100.0 35 ..................................... GTCAGTGGCACACTCACGCGCACCTCGGCCTCGAC 31623 37 100.0 37 ..................................... CTTGCGTTCGTGATCCCGGTGGCGTGTCCGTCTGTGA 31549 37 100.0 34 ..................................... CGCGGTCAGGCCTACGCATTCCCGGCCACCCTCT 31478 37 100.0 38 ..................................... CCGCAGCGTGCTGCGCGAACATCTGCTTCTGCACATCA 31403 37 100.0 34 ..................................... TGTGATCGGAGCTGTGAGCGATATCGATCACACG 31332 37 100.0 35 ..................................... AACCTGCTGCCGAGCAGCGCGGGATAGCCAGGGCT 31260 37 100.0 33 ..................................... AGAAATCGTCGCATCGAGAGCGTCGCGCATTGC 31190 37 100.0 34 ..................................... CGCTTTGTCGGGGCGGAAACATTGCGTATTGGCC 31119 37 100.0 34 ..................................... AGGCAGTAGCGGGTTGTATCCGGATTCGCCAGGC 31048 37 100.0 37 ..................................... CGCGATAGGGGGCCGCCGAGTCTCGCGACATGAGCAC 30974 37 100.0 35 ..................................... AAGTTCATCCGCAGAGAATGAATAATACCCTTCTG 30902 37 100.0 35 ..................................... GGCTGGCATTGCTCAAAGACCTGCAGCGCGAGACG 30830 37 100.0 35 ..................................... ACGTTGGCGGCGGCCCGAAGCTGACGAATGAAGGA 30758 37 100.0 35 ..................................... GATGACGCGTTTACTGAATCATCTGTAGTGGACAC 30686 37 100.0 34 ..................................... TGTGGGACATCCAGGAAAATCTCGGCCTCGCGGA 30615 37 100.0 35 ..................................... ATGATCTTTACCCCCGCTCCTGATCCCGAGATGAG 30543 37 100.0 35 ..................................... TTGCTGCCCTTCCGCGCCCACTTGTAGCCCCGCGA 30471 37 100.0 34 ..................................... CGCGTTCAGCGAACGGCCGTTGAGCTCGGCCTCG 30400 37 100.0 35 ..................................... ACCTCGGAAAAAATCCGTGTGTCGTTTGTCATGGA 30328 37 100.0 34 ..................................... TCAAGCATTCGGATGGAGCCCCAAGCCATGATGA 30257 37 100.0 36 ..................................... TACAAGTGGTTGCAGTGGAAGCGGCTGCGGACGGAC 30184 37 100.0 34 ..................................... CATCTCACCCAGGCCGCAGAACTCGGCCAGCAGG 30113 37 100.0 34 ..................................... GTCAGTGATCACCATGTTTAATCCCCATTTTTCA 30042 37 100.0 34 ..................................... CATGAGGCTGTGCCGGATGACTTCATCTTGTCGG 29971 37 100.0 36 ..................................... ACCCGCACCACCTGCACCTTGCCGCCCGGCGACGGG 29898 37 100.0 33 ..................................... TCCGCCAGGCCAATCACCGTCACCACCCCAGCC 29828 37 100.0 34 ..................................... GAGGTGAGCGATGAAATGCGTTACCTGACCGGTA 29757 37 100.0 35 ..................................... AAGCAGTGGGGAGAGTGGGTTCCGAGAAGCGACTG 29685 37 100.0 35 ..................................... ATCGGTTTTGGAGGACTTTGCCAGCCCCTCCATAG 29613 37 100.0 35 ..................................... GTGTCCTGAGCAAGTGTGCCAGCGGGAATGACAGT 29541 37 100.0 34 ..................................... CTAATACTTTGGCATGGACTACCTCCAATCAATA 29470 37 100.0 36 ..................................... TTCAGCCTTGGTAGCGAGCTCCAGACCCGCCAGAAG 29397 37 100.0 34 ..................................... TGAGTGCCGCGGACGACACCGCCACCTCTATCAA 29326 37 100.0 38 ..................................... ATCTCGGCAGCGCTGCATGAGCGGAGGCACCGACCAGG 29251 37 100.0 33 ..................................... TCATGCTGGCCTTTCACACCAAAGCCGAAGATC 29181 37 81.1 0 ......................C..A.AA.C..CC.. | ========== ====== ====== ====== ===================================== ======================================= ================== 176 37 99.9 35 GATTCGTCCGTTAGCAATAACGGACGTGGATTGAAAC # Left flank : CGTCATCCGCTGAAAGCACCGCCATGCTCGTCATCGTCTGCTACGACGTGAATACCGAAACCAAAGCCGGCCGCCGACGCCTGCGCCGCGTCGCCAAGGTCTGCGAAGGCATCGGCCAGCGCGTCCAGAAATCCGTCTTCGAATGCCAGGTCAACTTGATGCAGTTCGAAACCCTCGAACGGGAACTCCTCGCCGAAATCGAGTTGTCCGAAGATAATCTCCGCCTCTACCGCCTCCCCGAAAGCCGCGGCTCTGAAGTACGCGAACACGGTACCTTCCGCGCCACCGACTTCAACGGGCCGCTGGTGCTGTAACATCTCTGGCGCGACCCCCTAGTGCCCAGGATTTTCCCGGCAGGTTCGCGCGAACACCAAGTTGTTGATTCAAAGCAGTAAGACAAAACAGAACCTTTCCATGGAACATCCGTCACCACACTTCACGCGCAGGTTCGCGCAAAGCGGACTTTTTCCCGTGACGGATCAGACTTTTGCGCGCGAAGG # Right flank : CATGATCGATGCAGTACCAGCGGGCCTGCCCGAATATTCATCGCACGGTAGCCAGCGTGCCCCTCACGCTAAGATGATGTTGTCGAGCGGAGTGCTGTCGAGCACGCTGCGCTTTCATCCACATGAGGCAGAGCAGCATGGACCAGAACGAGTTTGAGGCGGCGTTGCGGCGCGACGGGTTCGGGGAGATCGTCATCGTGGAACGCCCGCCCAACGGCCATCTCGATGTGCACACCCACCCCTTCGAGGCGCGGGCGCTGATTCTGAGCGGTGAGATCAGCCTGAGCTACAACGGGACTGAGCGGCACCTCAGGGCCGGGGAGGTCTTCCATCTGGCGGCCGGACAGGCCCACGCGGAAACCTATGGGCCGGAAGGCGTCCGCTACGTCGTCGGCCGTCGCTGACCGGCGGCACACAGGGCAACGAGCCTGAATGCAAGCTTTGTGCGCTATACACGCCGCTCTCCCTGATTTTCTTTCCCAGGAGCCGCCTTGAATCCG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTCGTCCGTTAGCAATAACGGACGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: R [matched GATTCGTCCGTTAGCAATAACGGACGTGGATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.50,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //