Array 1 1197096-1200100 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP046729.1 Ralstonia syzygii strain LLRS-1 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1197096 36 100.0 30 .................................... GAGCCATTGCATTTCGGGCATTTGCTCGAC 1197162 36 100.0 30 .................................... GGGTGGGGCGTCAGGCGGGATCGAACGTCA 1197228 36 100.0 30 .................................... GAAATTGACGATGACCTGAATGATGCGGCT 1197294 36 100.0 30 .................................... AGTGATGCCGCGCTGCTCATTAGCAGAATG 1197360 36 100.0 30 .................................... GAGTATCCGCAGCACTCTGCGCAGCATTGC 1197426 36 100.0 30 .................................... GTGCGGATGTTTTCGCAACGCCGTTGACTT 1197492 36 100.0 30 .................................... TGTTCTTGATGCAACACGATCAAACGCATG 1197558 36 100.0 29 .................................... GCGCGGTCCCTACAGTCAACACGCCCGCA 1197623 36 100.0 29 .................................... ATCAATGCCACGATGCCCGCCAACGCAGC 1197688 36 100.0 30 .................................... GTAACGGTGGGGAACGTCCATACGATGCTC 1197754 36 100.0 30 .................................... CCACGCGCGGGGCTTTCGCTTTTCTGGAGG 1197820 36 100.0 30 .................................... CCTTTCAGGCTACCGCCGCGGGCGTTGACG 1197886 36 100.0 30 .................................... CTCAATTGCCACACTGTCCAATTTGGACAC 1197952 36 100.0 30 .................................... GACTTCGCCATCGCGGGTGATCCGCGAGCA 1198018 36 100.0 30 .................................... ACGCTGACTGCTTGGACGATGCCGCTGCCT 1198084 36 100.0 30 .................................... TGCTCAATGGCGTTCCCACCAACGTGCTGG 1198150 36 100.0 30 .................................... ACAAAGCCAGATATGCCCATCCGGTACTTT 1198216 36 100.0 30 .................................... GTGTCGATCCCGGTATCCAGCCCGGGCTCA 1198282 36 100.0 30 .................................... TTGGTCGAGCCCATGGCACGCCGGCTGTGC 1198348 36 100.0 31 .................................... CGGCGCGGTGTTTATCGGGCTCTGGCTGACG 1198415 36 100.0 30 .................................... TGGCGCGTGGCGAGCGTTGACACCATCGTC 1198481 36 100.0 30 .................................... CCACATCCGACTGCGGCCGCTGGCCGGACT 1198547 36 100.0 30 .................................... CGACTCGGCCTGCTGCTGGGCGGCTTGCCT 1198613 36 100.0 30 .................................... ACAGCGTCGCGCACAGCGCCGTCCACAGCG 1198679 36 100.0 30 .................................... CTATCCGTCGTCACCAGCACCACCGCATCC 1198745 36 100.0 30 .................................... AGCCACACGCTCCACAGCAGAAACCAGTAG 1198811 36 100.0 30 .................................... GCGCATCGTCCTGCATGCCGTTGCCGCACA 1198877 36 100.0 29 .................................... TACTGTACTGGGCAGCAATAAGCGCTATA 1198942 36 97.2 30 T................................... GAAGGCGTCCAGTGGTCACGGTATGCACCG 1199008 36 100.0 30 .................................... GAACGAACATAACGCCAAGCCAGCACAGCA 1199074 36 100.0 30 .................................... TAGATTGACGATGACCTGAATGATGCGGCT 1199140 36 100.0 30 .................................... TGGAAACATCCGTGCGGGATCAAAGGATGT 1199206 36 100.0 30 .................................... AATATCGCCCATTCCAATATTGATAAAAAC 1199272 36 100.0 31 .................................... CATCACTGGGGGTGCATGCTGGACAGTCGAT 1199339 36 100.0 30 .................................... GACGGGCCTGATTTGAAGGAACAGAAGATC 1199405 36 100.0 30 .................................... GAACCGATCCATCCGTGCGAAGGCTGCCTC 1199471 36 100.0 30 .................................... CGGAATTGAAACCCCGTCGTGGAAGGGCTA 1199537 36 100.0 30 .................................... GAGGCTGTTGTGTATGCCATCGAGAACAGC 1199603 36 100.0 30 .................................... AGTGGCCGGCGAAACCCTCCTTGCTCGCGT 1199669 36 100.0 30 .................................... GCGCACGTTGCAGCGTTCGAAACGGTGCGT 1199735 36 100.0 30 .................................... GTAATCACAACGCCAGCGGGGATCGTCATC 1199801 36 100.0 30 .................................... ACAACTCGCGCAGCAGCCGCAACTGCCCGG 1199867 36 100.0 30 .................................... AATGCCCAGCTCACTGCGGGTTGTACTGTC 1199933 36 100.0 30 .................................... AGTCGTAGCGGCCGAACAGCACGCCAATGG 1199999 36 97.2 30 .....................T.............. CAATCAGCCTGACGCGGCGTGTACGGCGAT 1200065 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 46 36 99.9 30 AGGTTAGCAGATCGGGAATTGCGCTCTGGCTACAAC # Left flank : TCGTTGGCGCAACTGTATCTGGGGGAACGCAAGGAACTGGAGTTGCCATTGTGCCCTACGCCGATTGATCTAGCCGCAATGTTCGTCCCATTGGCATGAGCGTCGCGCTTTCGGGATATCGCCTCATGTGGTTGCTAACCATGTTCGACCTGCCCGTCGGCACCAAGGCTGAGCGCAAGGCGGCAACCGGTTTTCGCCATTTTCTGCAAGATCAGGGCTTCGAGATGGCCCAGTTCTCTGTTTACATGCGGTTCTGTACAGGGAGGGAGCAAGTGGATACGCTGTGTAGGCGTATCCACGAAGCACTGCCAGGCGGTGGCAAGGTCGATATCCTATGCATCACCGATAAGCAGTATGAAAACATCGTCAGCTTTGCTGGCAAGGTCAAGCAGGCACGGAAAAATCCGGACCAGTACACACTGTTTTGACACCATGCGCGTAGTTTTTCTCGTATGCCAGCGTGAAATTTTCCTTTGGATTCATAGGGTTGCGTGTGTGCG # Right flank : CAGCAATCATTTGCATCGGGACCGACGAGGGCTGGCTGTACCTGGCCGTGGTGCTGGACCTGTTCAATCAGGAAGTCGTCGGCTGGTCCATCAAGCCGCGCATGACAGCAGACCTCGTGACCAACGCGCTGACGATGGCGTGGTTCCGCCGCAGGCCCACACCCGGTGCGCTGCACCATTCTGACCGTGGCAGCCAGCACGCGAGTCACGAATTCCAGCGCAAGCCGGCCGAATACGGCATGCGCTGCTCGATGAGCCGTGTTGGGACAATGCACTGTTCAACAGCTTGAAGAACGAACGGGTGCATGTCACGCGCTACCGAACGCATCAGGAGGCTGCGGCGGACTTGTTCGAGTACAGCGAAGTGTTTTATAACCGCAGTCGCCGTCATTCGTCGCTCGGCTTTGTCTCGCCAGCTCAGTTCATGCAGGGCTGGCTCAAGGCTCAGCAGACAAAGGAATCGGTTGCATAACCCGGTGCCTCTGGAAGGCGAAAAACAG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGGTTAGCAGATCGGGAATTGCGCTCTGGCTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.70,-4.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [55.0-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.42,0 Confidence: HIGH] # Array family : NA //