Array 1 52887-53282 **** Predicted by CRISPRDetect 2.4 *** >NZ_LXSW01000008.1 Pantoea agglomerans pv. betae strain 4188 NODE_8_length_141011_cov_321.467682, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 52887 29 100.0 32 ............................. CTGAGCATCGGAGAGATAACAGTATTGCCTGC 52948 29 100.0 32 ............................. TGATGAAGAAAAACACCAAACGCGGCAATGAA 53009 29 100.0 32 ............................. CATCGCACTGCAACCGGCACGGATAAAACTAC 53070 29 96.6 32 .............C............... TGGACGGCAAAAACATGATCCCGGACCGCATC 53131 29 93.1 32 ......T......C............... CGCGCCGATGACCTTTTCGATTGCTACACGTA 53192 29 93.1 32 .............C.............T. CCGTGGTGTTGGCGATCTGCTGTGACATGTTG 53253 29 86.2 0 .........A...C........C.C.... | A [53274] ========== ====== ====== ====== ============================= ================================ ================== 7 29 95.6 32 GTGTTCCCCGCGCTAGCGGGGATAAACCG # Left flank : TCATGAGATCCCTGCCGTGTCCACCATTGAGGCTCTGGCAGCGAATCCTGACTATCAGGATTATATCTGGGCATTGGTTGATGTAGATGTCATTCGCTTGCTGGGCGGCTCTGAAAAAATCAATGTCACTTTACCCAGGTCGCTAATTGATCGGATTGATCGTTGTGTGGCTTCACACCCGGAATACAAAAGTCGCTCAGGCTTTCTGGCTCAGGTAGCGCTTGAGCGTATTACCGCTCCGATTAACAGGCCTCAAAAGTAAGTCCGCGCGATAGCTAAATTTATTGGTGGCAGAAGAATCAAAAGGCACAGTTTATGAGTTTTCACCCCTTAAGCCGCTGCCAAGATCTTTCTTCAGTATGGTCAGGTTGAGGTCTTTGATGGTGCTTTATCCTGATTGATAAAACTGGCGTAAGAATACATATTTCGGTGAATATGGATGGACTGCGGCTGATTCTCTTCCTGACGCCTGATGAATCTGATGGACTGGGTACAAATCG # Right flank : GGCAGTTCTGCGCCGATATTATTTTTAATGCCCGGTCTATCCTTCACAAACCACGACTAAACCTTCATCTAACCACGCATCTCCCATGCAGCCACCCGTTCAATAAACATCTGTGCCAGGGCAGCAATGGCGCTGTTGCCGGGCAGTCTCTCTTCGTTCATATGCATCACCAGCGAACTACTGCGTCGGCGGCCCTGTAACAGCGGCAGTGGACGGAGCTCACCGCTCTCTAACAGCGCGGCGATATTCTGTTCCGGCAGCCAGCCATAACCTAACTGATGCTGGACCGCTTCAATGGCTGCCGACAGCGTCGTGAAGGACCAGTTTTCCGCCTGATCGCCATTGACCTCTGACTGCTGCTGTTGCTGACGATCCAGAATGGTAATGCAGGGCCAGCGTGCCAGCGTAGCAGCACTAAGCGGGGCGGATTCGCGGTGCAGCGGGTGGTCGCGATGGGCGACGGCGACGAAATCGACACTCATCAGGCTTTCGCCTGCTAA # Questionable array : NO Score: 5.89 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCTAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCTAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //