Array 1 21728-22748 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CAJETG010000019.1 Staphylococcus pseudintermedius isolate 18S03473-1, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
     21728	    36	 100.0	    30	....................................	TATCGTGTGATTTTTCTATGCATGAGCATA	
     21794	    36	 100.0	    30	....................................	TTGCGTTTTAAGAAACAAAGAAGGTTATAC	
     21860	    36	 100.0	    29	....................................	AGCTGTTCTATAACTTTCTCCGCTATTTC 	
     21925	    36	 100.0	    30	....................................	AGAATAAGCTGTAGTTTTACCACTGGCCGT	
     21991	    36	 100.0	    29	....................................	TACGTTGCATTTCTTTATCATCGGTAACA 	
     22056	    36	 100.0	    29	....................................	ATTTTGTACCGAATAGCGTTTCAGGGCGC 	
     22121	    36	 100.0	    30	....................................	TGTACGTTCAAACACAACCGCAACATCTGG	
     22187	    36	 100.0	    29	....................................	TACAACGCTTTTGTATGGAGCAATACGGT 	
     22252	    36	 100.0	    30	....................................	AGAAGTAAATAGCAAACTGAACGATACTAT	
     22318	    36	 100.0	    29	....................................	GAATTTTGCAGTCCTAGTAAGCGATAGCG 	
     22383	    36	 100.0	    29	....................................	AAATATTGGCGTTCTCAGTTTAACCCATA 	
     22448	    36	 100.0	    30	....................................	TGAGCCTTTATCATTTAGAACAGCTAGAGT	
     22514	    36	  97.2	    30	............................A.......	ACAATACTTGATGCAGGCAATAACAAGCTG	
     22580	    36	  97.2	    30	............................A.......	AATGCACGTGCTGTTATGGTGAAAGGCTAT	
     22646	    36	  94.4	    30	...........T................A.......	CGAAAGTAAAGATAGTATGCAAGGTGCAAG	
     22712	    35	  88.9	     0	..........................-.CA.C....	|                             	TC [22745]
==========	======	======	======	====================================	==============================	==================
        16	    36	  98.6	    30	GTTTTAGCACTATGTTTATTTAGAAAGAGGTAAAAC	                              	       

# Left flank :   TTTTAATTATATTATTTCCGGAATCACATCTTGGCATACACGATATTAAAAAGTTTATACACCTTATAAAGAGATATAAATTTACCACGATTATTTTTACTAATCATCCTTCTATCATTATTAACGAGGAAAACATATTTCTTTGTAAAAGTAATAAGAAGTGCCACGACATCGAAAAAATATATGAAGAATTAATGTTATTTGTTCCTGAAGAAGTAGTGAGTCATCAATTAGTTAACATGATTGCATATCACGAATTCGTTGGTGAAAACCTTTCCGAGTATGAGCGATATTTTAAGTTTATCAATCATTACAATTAGGCTATACTATATTTAACATTATATGATAGAGAAAAGTTGATCCAACGATGAAGTAATGACTATGTGACTTCATTCGTGATGAAGAGGGTTAACTTTATCATCGAGTATCATATCTGACTTCTTTTAATAGTGCCAAGCCTCAATTTTGAAAAGGATTGAGTTAATGTTTTTGGATTTGAG
# Right flank :  CCTTCTTTATAATCGTACATCAACCTCACTATGCTTTCAAAATAATTAAGAGGCATTGTGGGCTTTTTGTGTTTATACGAAATGTTGTATGAATCTCTCAATCGTGCCACCATGTTATAATAGGTATAAATTGTTCATAAAAGATAAATAGAAAGCAGGGGAAATCTATGGAAGCAATTATTGCAACTCAACCGTTCCAATTAGCAGAAGGTCAAAAGTTTGAAAAAGTATCGCGTGAGCTCCCAACACCAGAGGCGCATGATATTTTAATCAAAGTGTACGCAACAGGGATCAATCCGGTTGATACGAAAATGCGGCAAGCCCCGTTAAATGCTGAGGCACGTGTCCTAGGTTTTGATGCGGCAGGTGTGGTTGAAGCGGTCGGCGATGCGGTTACGGATTTCAAACCGGGTGACCGAGTATATTATTCAGGATCGAATCAACGAGATGGCTCAAATCAGACGTATCAGCTCGTGAATGAAAATTATTTAGCGCATATG

# Questionable array : NO	 Score: 6.19
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGCACTATGTTTATTTAGAAAGAGGTAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:72.22%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGCACTATGTTTATTTAGAAAGAGGTAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-0.20,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-8] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [68.3-68.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.91,0   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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