Array 1 7790-5085 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMWY01000029.1 Nitrosospira sp. Nsp18, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 7789 37 100.0 34 ..................................... CGACTGACTTCGGCGTGATCGCGGTTGACTCCGC 7718 37 100.0 34 ..................................... ATCAAACAGGACTGATACCAAGGAAAACCTCTTG 7647 37 100.0 34 ..................................... ATATCGTAAAAGTACCAAGTAGCGTACACCTCAT 7576 37 100.0 34 ..................................... TTCTCGGCTGATGGATAATGCCTGTAGTTCTTCA 7505 37 100.0 37 ..................................... CTGGGAATAGTTCATGGAGAGGAACTTCTGGTAGAGC 7431 37 100.0 34 ..................................... CAAAACGCTTCCTGCGCAGGGCTTGCTGGTGCGC 7360 37 100.0 36 ..................................... ATATTGTTGTAAACGACAGTGCCGCCCACAAAATTG 7287 37 100.0 34 ..................................... CTGATTACGACGACTTTTCCGACGCAGCTCTTCT 7216 37 100.0 35 ..................................... ATTTGCAGACAGAAAGGCTAAGGAAAAAGCGGATG 7144 37 100.0 37 ..................................... ACGCTATGGAAAGGAGATCAGATGGTTGGGATTTTTG 7070 37 100.0 35 ..................................... ACGCTCGATATTATTAGACGCCATTGTAACCAGCA 6998 37 100.0 34 ..................................... ACGTATCTTTTGTAAACGCGGCTTTGATTTTTCA 6927 37 100.0 35 ..................................... AATCTGGTACGTTGACGTTGGTTCCCGTGATCCTT 6855 37 100.0 34 ..................................... GTTGCCTGCGCGATTTGCGCGGCGTGTGGAAAGT 6784 37 100.0 34 ..................................... TGACCAACGCTGACTGATCGCATAGATTGTGATG 6713 37 100.0 36 ..................................... CTTGTACTCACCACCTAGCCCGCCTTGCAGCCACCC 6640 37 100.0 38 ..................................... TCTATTTCAGGCTGCGCGAGATAACCAAAAAACTCGTG 6565 37 100.0 35 ..................................... CCGTCGTGCCGAAGAAACGCACGTTTTCCGAAGAG 6493 37 100.0 35 ..................................... ATTTCGTCGAATTCAGTAACGGAACGGCGGGCGAA 6421 37 100.0 37 ..................................... GACTACACAAAATACATCCGCCTGGCCGCCAATGCCG 6347 37 100.0 34 ..................................... TTTTGCCCTCTCCATTTACTTGCGCGACCAAAAC 6276 37 100.0 37 ..................................... TTCAGAAACTTGACCATGATTTTATGACCTTTAAAAT 6202 37 100.0 35 ..................................... CAATGGTGCGGCGATGTACCCACATACTAGCCACT 6130 37 100.0 35 ..................................... CGCCTGCGGCGGGTGAAGTCGCGCTGCCGGACATG 6058 37 100.0 36 ..................................... TCAATCGTCTAGTTTTTAAGCAGTTTCGACCGCATA 5985 37 100.0 35 ..................................... CAACGTGCCCGCATCAAGGAAATAGAAGAAAGGAT 5913 37 100.0 35 ..................................... ACATGACACCGTAGAAGCGCTACAAACCTTGTTAG 5841 37 100.0 37 ..................................... CGCTCATCGCCACGGCCACCGCATCGCATTGCAGGGC 5767 37 100.0 34 ..................................... AGAAACGCCTGCAGATGGGCGATCCTGTATCAAT 5696 37 100.0 35 ..................................... TCGAACGATCACATGGAGCGCGGACACGAGCAGGA 5624 37 100.0 34 ..................................... TCGCGTACATGCCGATCATTCCGCATACCGCACC 5553 37 100.0 33 ..................................... AGGTATATCGCTATCCTGGTCATATGGGCTGTG 5483 37 100.0 35 ..................................... CTATTTGACGCATCATTTTCCATTACCCCAAAGTT 5411 37 100.0 34 ..................................... ATTCACCTTGTCATAATTGCCGGGTACGACATTG 5340 37 100.0 35 ..................................... AACGTGTCAACGGGTGGCGTTCTGCCGGTAACAGT 5268 37 97.3 36 ...................G................. ACGCTCAAGTTCGATAGCGACGTAGACCGCGCCGCG 5195 37 97.3 36 ...................G................. GCAATAAATGACGGGCCTCCTCCAGTTCGGGCGGAG 5122 37 86.5 0 ...................T..........G..T.GT | A [5088] ========== ====== ====== ====== ===================================== ====================================== ================== 38 37 99.5 35 GTAGCGCCCGGCCAACCGACCGGGCGAGGATTGAAAC # Left flank : TGGATACCTGCCTTTCTTAGCGAGATAGCCTTGCTTATCATAGTAACTTACGATGTTTCCACTGAAACCAGGGAAGGGCGCAGAAGGCTGCGGCGAGTAGCGAAGGTATGCGAAGGGATGGGGCAGCGCGTCCAGAAATCGGTGTTCGAATGCAAAGTTAATCTAATGCAATATGAAGAGCTGGAGCGAAGGTTATTAGCAGAGATCGAACAGAAAGAGGACAATCTACGCATATACCGTTTGACTGAGCCAGTCGAACTGCATGTGAAGGAATATGGGAATTTCAAGGCAGTAGATTTTGAGGGACCCTTGATCATTTGAAGAGCGCGAACCTCAAGCTGCGGCGAAGTCGCGCTAGGTTCGCGCTTCCGCTAGACATTTGGTATCTATGACTAATTTTGCCCAAATTTCATGTTTCAGACCCTTATTTAGACTAGGAGCAAGGGGTTCGCGTATTTGTAGAAAAATTCATCATTTTATTATGTAGTTGTAGCTGTACC # Right flank : TGAGCGTGTTCGTCGCCCCCAGGATGGTAGCGTCCCGCTGTCTGACGGCGGAGATTAAATTGTCGTGCTGGTATTAACCTTCCTCGTCTGCGCAAGTAGCAGCGCCAAGAGACTGATCAAGGATGATTGAAGCGCTGGTAAGGGTTAAGTGAGTGGGTGATTGGTAGCGCAGAGTAGAAAATTTTCGAGGATCACTGCCTAGAGTAGTAGGCGGGAAGAAGCGTGTCCAAGTTAGCTAGAATCGAAATATGAAGGGTAGCGTTGTGCGTTAGCATCGGCCTTTTACACAAATAATTGGATATCGAGGAGGCCGGCCTCTAAGGATGTGTGCGCTGCCGTACAGAAACTGCTGAATTTCAACACTACGCTGAATTTAATATCTCTGGTCTCGTATTAGCTCCAAAGGAGGAGATTGACATGCGAACAGTTGGCGATGTGATGATTCCGGACGTGCACACCATCAGCCCGGACGCAACAATCGAGGAAGCAGCGCAAGAGAT # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGCGCCCGGCCAACCGACCGGGCGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [3,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-16.70,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : NA //