Array 1 73377-75664 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP014038.2 Vibrio harveyi strain FDAARGOS_107 chromosome 1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 73377 29 100.0 32 ............................. CGCGCAATGTCGGCAGCTCTGGCGCGCTGCTG 73438 29 100.0 32 ............................. CTTAAACGTTAGCTGGTAATAATCGCCCTTTA 73499 29 100.0 32 ............................. CGCGTTTGTTACCCATTCTCTATCGCGTTGTG 73560 29 100.0 32 ............................. TTTGTGTCTGCCTCGATGTCGCTCATCATCTC 73621 29 100.0 32 ............................. AAATCGTAGTATAAGTATTCACATTTGCAAAT 73682 29 100.0 32 ............................. ACACTTCTTTGTGTTGAGCAGTTCGCCAATGG 73743 29 100.0 32 ............................. TAAACGCGCTGATATGGATCGTTTGGTATTGG 73804 29 100.0 32 ............................. ATTACAAGCCTGGGACGATGATTATTCACAAG 73865 29 100.0 32 ............................. TTTACACCGATTACAAGTCACTCAAAGAAAAA 73926 29 100.0 32 ............................. CCTAGATAGTTTGGAGTTTATCGACATGACTG 73987 29 100.0 32 ............................. AGACTTATCCCATAGAGCATTTCCAGACTTAA 74048 29 100.0 32 ............................. GAAGCAGACAGACGAGCGCACGATGGCGTTAC 74109 29 100.0 32 ............................. TCAACGGTTAGATCAGAGTTAGCCTTTCGCAT 74170 29 100.0 33 ............................. CGGATCTTGACTTTATGGCTGTAGACAATCCAA 74232 29 100.0 32 ............................. GTAATGGTCTGCCTAACATCGTTGATGTTATG 74293 29 100.0 32 ............................. GGTGTATTACTTGGTACACACTTACACTTCAC 74354 29 100.0 32 ............................. CCAGTAAGCGATAGCGCGCTAGTCCGTGCCAC 74415 29 100.0 32 ............................. CGTGACATTTGACGTAACAGCTTTGCCTATGT 74476 29 100.0 32 ............................. CGTCCAGCGGCAGGAATGACCACATCTGAGTC 74537 29 100.0 32 ............................. TGTGATGTAGGTGTAAACACGACCAAATCAGT 74598 29 100.0 33 ............................. CGGTGCTGTAGCAAAATGATGATGTCAGTAACG 74660 29 100.0 32 ............................. CAATCAGCAAAAGCATGGTGGTGGATAACAAC 74721 29 100.0 32 ............................. CCAACCGTCACGAGTAAATTTATCGCCAGTGT 74782 29 100.0 32 ............................. CAATGCAGGCTGGCGACCTGAAGACGGCAAAA 74843 29 100.0 32 ............................. GTCAAACATTTTGAATGGATAGATTATGAGTA 74904 29 100.0 32 ............................. TTGTTCCGGCTGGTACCGCTGATTCAGTTCAG 74965 29 100.0 32 ............................. CACTTGGAGTTATTGATCGAGAGTGATCAAAA 75026 29 100.0 32 ............................. TGACTACATTCTGTCAATGGAGTATTGGGAGA 75087 29 100.0 32 ............................. AGCATCAGCAATATCCTTGGGTAGTTCATCAG 75148 29 100.0 32 ............................. CCATATCAGACTGAGTAGATACAACAGATAAA 75209 29 100.0 32 ............................. GACACAAAGAACAAATATGGCATCGATAACAG 75270 29 100.0 32 ............................. TATCAAAGAACATCTGCATGCACTCTTCATAG 75331 29 100.0 32 ............................. AGTCACCGGGTAAGACCGGAACGGTAGAAAGA 75392 29 100.0 32 ............................. ATCGCGCTATCACATTCGTTTTGAGCCATACC 75453 29 100.0 32 ............................. CTGATTTGCTTTCTTTTGCTGGCTCGTCCTTT 75514 29 100.0 32 ............................. CCTCGGAAATATACGACGAAATTTACAAGAAA 75575 29 100.0 32 ............................. ATAATCACGTTGATACTTACCAGCATCTTTTG 75636 29 93.1 0 .........................G..A | ========== ====== ====== ====== ============================= ================================= ================== 38 29 99.8 32 GTGTTCTCCGTACCCACGGAGATGAACCG # Left flank : ACTAATTGAAGAAGTATTAAGCGCTGGCGATATTACGCCGCCAGAGCCTTATGTGGATGCCCAACCTCCGGCGATACCTGTGCCTATCGCGGTTGGGGATTTTGGTCACCGGAGTAAATAATGTAATGAGTATGTTAGTGATCGTGACAGAAGCGGTTCCCCCTCGATTGCGAGGAAGGCTTGCTGTGTGGTTATTGGAGATCAGAGCTGGCGTATATGTGGGTGACGTATCATGTAAAATCCGTGAAATGATTTGGGAACAAATTAATGTGCTAGCCGATGACGGCAATGTTGTGATGGCGTGGGGGACAAATACAGAATCGGGATTTGATTTTCAGACGTACGGGAAAAATCGCCGAGAACCTATCGATTTAGATGGTTTAAGGTTGGTGAAATTTCAACCACAATAATAATTGATTGGTGTCGGTTAGCTCTTTAATAATGTTGGTAGAATAAAGCATGTTGATTTTTTTATTATAAATCAATAGTATATTTTTAGA # Right flank : ATGAATTCATTAGTGAATTTACATTTAATTTTATTCAAATTTATTATTATTCAAGATAATCAAATGAAATAAACTGAAATGTCTTGATTTTTAGGTAGATGTATTTTTCTTATTTAAATGAAAATTTATTTATATTATGAATCTCGATTCAGGTCACTTTAACTTTGAACTCTCGCATTGGAACCGGTTAACTATTTCAGGTTCGACATACTCCTTCTGAGAAATTCTGCTTTGGATATGGTTATTTCAAAAGATTCTTAGCGTGGTGAAAAATTCGTACTGTTATGACATATCAATGGTAATCAAGAAGGGCGGTTCTTTAGCTGAATTAGAGTTATTTTTATTAATAGCAACCTACTTTTTGAAAGGTGTTTCTTTGGAAGAGCGTACTTCATCAACTGAATGTTCGATAATGTCTTTAGTAGCTTCAAATAGCAATTCTCCAAGTACTGAGCATTTTAGTAAACGCGAGCTTTGATATCGACATTCAGAAATATTCA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCTCCGTACCCACGGAGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGTGCCCACGGGGATGAACCG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.20,-7.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-85.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //