Array 1 94989-93923 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_NMJG01000009.1 Escherichia coli strain MOD1-EC6323 MOD1-EC6323_9_length_163130_cov_50.0875, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
     94988	    29	 100.0	    32	.............................	TGAACTCGGTCAAGATTTTGCTCTCAGTACGG	
     94927	    29	 100.0	    32	.............................	ATTAACGGTCGCATCATCATATTGAAAAAATC	
     94866	    29	 100.0	    32	.............................	TTATATAATGGCGCATTATTTTGGCGTATCTG	
     94805	    29	 100.0	    32	.............................	CACATTTCGCAAGACGCATACGGAATCGCGGC	
     94744	    29	 100.0	    32	.............................	GTGTACCTGCGCAAAAAATAAGCGGCGGCAAA	
     94683	    29	 100.0	    32	.............................	AAGTATTTCCGTGCACCGTGGGAGGCGTTTTG	
     94622	    29	 100.0	    32	.............................	CGCGGGATACGCCGGTTATATCACTGGTAGTG	
     94561	    29	 100.0	    32	.............................	TAGTTGTGCTGATTTTTGATGGATGGTTATAA	
     94500	    29	 100.0	    32	.............................	GAACTTGCTTACCTTTGCTGTGCTCGTCAGAA	
     94439	    29	 100.0	    32	.............................	GGCGTTGGTGGCTGGGGCCGCCCGGTTGTTGA	
     94378	    29	 100.0	    32	.............................	AAATGGCATTCGCTGTTGGAATTATGGGGTAT	
     94317	    29	 100.0	    32	.............................	AGCGATTTCAACGCGGCGACGGTGGACTTAAT	
     94256	    29	 100.0	    32	.............................	CCAGTAGGCGATTTGCGGGGCGTTCATGTTTT	
     94195	    29	  96.6	    32	...........................T.	AGTCAAAATTAGCAAAACTTGATTCAAATAAC	
     94134	    29	 100.0	    32	.............................	TCCGGCGAGCTGGTCACCTGGCTGAATAAATT	
     94073	    29	 100.0	    32	.............................	GAAACTGAAATCGCGGTTGATAACGCTGATAT	
     94012	    29	 100.0	    32	.............................	GGTAAAAACACGGTCTGAACCGACATTCATGT	
     93951	    29	  96.6	     0	............T................	|                               	
==========	======	======	======	=============================	================================	==================
        18	    29	  99.6	    32	GTGTTCCCCGCGCCAGCGGGGATAAACCG	                                	       

# Left flank :   GTGCTTGCCGCAGGTGAAATTGAACCACCACAACCTGCGCCGGATATGTTACCGCCTGCCATCCCTGAACCTGAAACGCTGGGTGATAGCGGTCACCGGGGGCACGGCGGATGAGTATGGTCGTCGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTCGCAATCTGGCTACTTGAAGTGCGTGCCGGTGTTTATGTCGGAGATACATCCAAACGTATTCGGGAGATGATCTGGCAGCAAATCTCTCAACTGGCAGGTTGCGGAAATGTGGTAATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACCTGGGGTGAAAATAGACGTATTCCGGTGGATTTGGATGGGTTGCGTTTGGTTTCTTTTCTTCCTGTTGATAATCAATAAGTTATCCGTTCTTTAAAAATAAGGAAATGTTTTAATTTAGTTGGTAGATTGTTGATGCGGAATAAATTTGTTTAAAAACAGTTATGTATGCTTAGT
# Right flank :  GACGCACTGGATGCGATGATGGATATCACTTGGAGTTCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCATACCCATCAAGACGCCTTCGCCAGCTCCTTCACCAGCGGTAGCATTATCCGCATAACATCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGCTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCGGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTGCCAAGATTCCAGTTAGTCGCTTCCACCGAAAGTACAGCAATACCGGCTTTGTCGAATATTTCTGCGTCATTACAACACCCGGTGCCTTTCGGATAGTTTTTATTCAAACCTGGATTTGTGGTGGCGGCAATTCCATGGCTGCGGGCAATTGCCAGCGCCCGGTCGCGCGTTAATTTCCTTACTGCTTCAGGTGTTTTTACGCCACTGTTGAAATACAGCTTATCGCCAACAA

# Questionable array : NO	 Score: 6.24
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [4,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-12.00,-13.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [2-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [41.7-71.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.92   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
//