Array 1 66761-66610 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_MSDO01000010.1 Salinicola socius strain SMB35 contig9, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
     66760	    29	 100.0	    32	.............................	CGGCCGGCGCGGGCCAGCGCATAGGCGATATC	
     66699	    29	 100.0	    32	.............................	GCCGTCTGTCATCTTGGGGAGCATGTCAATGG	
     66638	    29	  75.9	     0	.............A......A..TC.ATT	|                               	
==========	======	======	======	=============================	================================	==================
         3	    29	  92.0	    32	CCGTTCCCCGCAGGCGCGGGGATCAACCG	                                	       

# Left flank :   ATAGGGACTCCAGCGTCAGTAGCGTGTCGGGCTCTGCCATGGATCGTGTCTGCAACGGAGCCATCAACCCAACACCCCGCCCGCCCAACCGGCGATGAGCCACAGCACCGCCAGGGGAATGAGCGCGAGCAGCACGCGCCGCCCCGCGCCCAGCGACATCAAGGAAAAGTGGCACGGCCCATCGGGGCGATGCCGGTGACGATGTGACATGAACAGATCTACCTGAAGAAAACAGGCGGAAAGGTTATATCATAACAAAATGGCTGCCAAGCAGTTTTCCGATACCCATCAGCTACCTCGTCCATTGGCGGATCTTCTTGGAAGAAGTCTAGAGAATCAGCAGCTCAATCTCTTGCTGTTGATGGAAAAACTTGGCTAATTTGTAACCATCTGATAATTAAATTTTTTTGCGGATTTGGCATCAACGAAAATAGCAGAAATTTACCGGTAAAAATTTGCGACTCTATTTTGCTCTTTAAAAACAAATACCTAAAATTAGA
# Right flank :  CGTATAGATGCTAATACGGTCGTAAAGTTACTCCTCCAGCGCGTAATCGATCGTCGTCACCACGCGAACTCGCTTGATATCGGGGGTGTAGCTGTCGAGATCCTCGATGGAGAAGTAGCCTTGACTGGCACTGCGGATCGCGCCGACGCGGCTGCCGGAGTCTCTGGCGAATTGCTGGGCGACACCACGGGCATCCTTGGTGGCTTCGGCGACCATTTCCGGCTTGAGATCATTGAGGCCGGTGAAGAGGAATTCGGTGCGGTAATCGTAGTTGGGTGACAGCACGACGCCGGCACGCACCAGTTCTCCGGTCTGGGGCATCGCTTTCTTGACGTCATCGACTGCCTGGGTTCGCAGCAGCACTGTGGCTTCGGCCTGATAACGCTCGTCGGGCCGGTCGGCACCGTAGAGGTTGGCGAATCGGTCGGTGACCTGGGGCGAGGTCACGGTGATGTTGTCGGTTTCGAAGCCTCGCTGCGTGAGAAACTCGCGAATGCGGC

# Questionable array : NO	 Score: 4.96
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.60, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CCGTTCCCCGCAGGCGCGGGGATCAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [3,2] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched CCGTTCCCCGCAGGCGCGGGGATCAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-3.10,-2.40] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [2-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [56.7-73.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.74,5.18   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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