Array 1 277373-278596 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUWB01000015.1 Streptococcus agalactiae SGBS020 ctg7180000000794, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 277373 36 100.0 30 .................................... AGAGGTTTTGAAATTTATCGAACAACAGGA 277439 36 100.0 30 .................................... AACATTAGCCTTTTCTAACTCTTCAGCTGT 277505 36 100.0 30 .................................... TATGTCTTCTAACAGTTGCTTCTTGTGCTT 277571 36 100.0 30 .................................... CCGTCAAACAAGAGCGACAGCGAAACAAGC 277637 36 100.0 30 .................................... TTTTATTGGTTTTCTAAGTGCTCGACCATC 277703 36 100.0 30 .................................... AGTTACTTCTGCTTGGGTTTGATAAGGGTC 277769 36 100.0 30 .................................... AAAAAATAAATGACTTTAAAGCACTTGGAG 277835 36 100.0 30 .................................... TAGTAGCCATTATTATTATGGCTTTTATTT 277901 36 100.0 30 .................................... GGATGATTTCGATTATGCGGCGGTGGTTGA 277967 36 100.0 30 .................................... AAATGTTAATTTCATATCTACATCTTGTTC 278033 36 100.0 30 .................................... ACATAACGTTCAAAAGTTTCCACTAATAGC 278099 36 100.0 30 .................................... TCAAACAACATTGGTGATCTTATTGCGGTA 278165 36 100.0 30 .................................... TTATTTAAGACGTGATTTAATGTTAAAACT 278231 36 100.0 30 .................................... CAAACTATCTTGATTATAAGTGGACTGATA 278297 36 100.0 30 .................................... ATTTTTACACGAGTGCTAGAAAACGGGGCA 278363 36 100.0 30 .................................... ACATTTGTTAAATTTGAACTTACTGGAAAT 278429 36 100.0 30 .................................... TCCAAAACAAATACGAATGCTTGAGCGATA 278495 36 100.0 30 .................................... TACTTGACGAATTGAAGATGACGGAATTTA 278561 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 19 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTACGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG # Right flank : CAAGCTAATTCTCATCTCACCGAGATGGATAGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCAATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTTCTTTGTCATTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //