Array 1 74689-72442 **** Predicted by CRISPRDetect 2.4 *** >NZ_AQYF01000009.1 Thioalkalivibrio sp. AKL8 G335DRAFT_scaffold00001.1_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 74688 28 100.0 32 ............................ TGGTGCGCGCCGGTGTACCCGAGGAGGAAGCC 74628 28 100.0 32 ............................ GACGCGCTGGAGCAGGGCGGTGACCTGAATCA 74568 28 96.4 32 .....................C...... GTTTCGGACTGCCACTGGGGATGGTTCGAGGT 74508 28 100.0 32 ............................ TTTGGCGTGCTGACGTTGGGGCTGTTCACGCT 74448 28 100.0 32 ............................ GAATTGCAAAGCCGGCAATCTGCCGGGGCTTC 74388 28 100.0 32 ............................ GCTTGCTACCACGACTGGCTCTACCGCCACCA 74328 28 100.0 32 ............................ GTTACCCTGCCACGCGGGGAGCTGCTGGTAGG 74268 28 100.0 32 ............................ ATCTGCGCGAGGCGGCCTTCGATTCGGCTCAC 74208 28 100.0 32 ............................ CACCTTTGCGGCCCCATTGCGGACGAGCTGGA 74148 28 100.0 32 ............................ GATGAGGTGCAGGACTACATCGACCGTCTTGA 74088 28 100.0 32 ............................ CTCGATGAGCGTCCGTTGCTCGGTGTCTTCGT 74028 28 100.0 32 ............................ ACGCCAAGGCGGCGGGCGCATGGTCCGTCGTG 73968 28 100.0 32 ............................ AGTTCGCCATGCACAGCGACCTGCTGGCCCTT 73908 28 100.0 32 ............................ GTCCGCATTGGTATTTCCGCGGTCCCCAATGG 73848 28 100.0 32 ............................ GAGCTGCGGGAGATTGCGGCTCGAATGCTGCG 73788 28 100.0 31 ............................ AGGTTGGCGACGTTCGGTTCGTTGGTGCTCT 73729 28 100.0 32 ............................ ATGCGGTGGCCTGGGCTGAGGATTTGGTCAAT 73669 28 100.0 32 ............................ GGGTGAGTTGATCGCAGAGACACCGAAGCCGA 73609 28 100.0 32 ............................ GAGGGGAACACCCTGGTGTTCACGCTCGACAA 73549 28 100.0 32 ............................ TTGAACAATCCCAGCCGGTGCCGGATATAACG 73489 28 100.0 32 ............................ CCGTTCATGGTATTTCTCCACCGGCTCCGGGC 73429 28 100.0 32 ............................ TCATCGTAGAACGACGGGCGCACGCCCATTGT 73369 28 100.0 32 ............................ GCACCGCTTGCCCCGCCACGGTTCGCCATAGT 73309 28 100.0 32 ............................ TCCTGCTGGGCCAGCGCCTCGGCCATTGAACA 73249 28 100.0 32 ............................ GCCGGAGACGCAGAGGATCACGCCTGCAAGCT 73189 28 100.0 32 ............................ GAAACCGGAATACCCATCTGCTCCGCCAGCCA 73129 28 100.0 32 ............................ TGGGACGCCAGCCAGTTCGGCTGCGGACTTTA 73069 28 100.0 32 ............................ TTCTCTGGTGGTGGCGGTGGCGGCGCGGGGCA 73009 28 100.0 32 ............................ GTCTGATGAAGAGTCCAGACCCGACCGATCAA 72949 28 100.0 32 ............................ CGAGATGCCGTCTGCGTCAATCCACGCTGGTT 72889 28 100.0 32 ............................ GATACCGTAGCGCCGGACTCCACCGGGTTCTC 72829 28 100.0 32 ............................ CAATCCGGATCCGTATCCGGGTTGATCCCTTG 72769 28 100.0 32 ............................ CTCGATGAGGACTCGAGGCAGCGTTTTAAGCT 72709 28 96.4 32 ..........................G. CACGGGAACATCTGGCACGCCCGCCTGGAACC 72649 28 100.0 32 ............................ TGACGCACACGACGACGTTCCCTGCTGGGTTG 72589 28 100.0 32 ............................ CTACAGGTGAACTTTGGCGACCTTTTTACAAT 72529 28 100.0 32 ............................ TCTTCGCCCAACAGAGCCAGCGCCCGCTTAGA 72469 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 38 28 99.8 32 CTTCTAAGCCGCCCATGGGGCGGGAAAC # Left flank : CGGTGCTGGACCTGTTCCACCGCAAGGTGGTGGGCTGGTCCATGGGCCGAAGGCTGGATGCCGAGTTGGCCTGCAGTGCGCTGAGCATGGCGCTGCAGAGCCGGCAGCCCGAGCCGGGACTTCTGGTGCACTCCGACCAGGGCTGTCAGAACACCAGCGACGCCTGGCGGCGTCTGCTGGCGCAGCACGGCTGCCCGGGCCATCGTGAGTCGGCGGGGGCACCTGCTGGGATAATGCGGTGGCCGAGCGCTTCTTCCTGAACCTGAAGATGGAACGGGTCTGGCGGCGGGACTACGCCAACCATGGCGAGGCCACCCGGGACATCACCGACTACATCGTCGGCTTCTACAACGAGCGCCGAATGCACTCGACCTTGGGCTACCTGTCGCCCAACGCCTACGAGCGAAAATGGACAGCCGAACCTCCTATCGAGGTGTCCGAAATCGCTTGACCACTACAGCGGGAAACGACGGCCCGGTCGGCTCGGCTTCCAGCTCCCT # Right flank : CGTAGATGAAACCCAGTAAAACACTGATCCAAAAAGCGAATCATGTCACGGGGTCGCAAATACCATTACACGAGAATGGAGTTGTAACTTACTGATTTATAAAAGAGCGGCATTCACTCATTGCCAACATGGTCTTTTATTGGCAAAGAGCCTTGATGGTATCGATCATCTTTGACAGCGACTTGGATTCGTGTGCGGTTTCGATAACCCGACCGCGAAACTCCCGGTTCAGATCGCGCTCAGAACCTTTCTTCGCGGCCATCTCAAATGCGGTCGGCATAACAAGGGAATCCTTCACCAGGTCCGCAACATCGAACACCAACCCCCCTCGCCGTGTCTTCCCGTGCAATACCGGCATGGCATACGGAATCCCCAGGGCGTGAAGCGCGGTAGCGGCATATCCGTACGCGAGATAGTTGCCGTGGTCGATTAAACCATTCGCAATATCCGAAACGGATTCACCTGCATTCTTGCCTTCTTCGCGTTGAAACCCTTCGACC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCTAAGCCGCCCATGGGGCGGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.80,-11.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: F [55.0-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.74 Confidence: MEDIUM] # Array family : NA //