Array 1 29156-28266 **** Predicted by CRISPRDetect 2.4 *** >NZ_QORY01000032.1 Bacillus sp. AR2-1 AR2-1_contig_32, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 29155 30 100.0 36 .............................. TGTGGAAGGTAAACTTTCCCACTGGGGACAACTCCT 29089 30 100.0 35 .............................. ATTGTCTTAATAAAGTAATCTGGGTCAGCAACATG 29024 30 100.0 36 .............................. TTTCCTATTCCCCTTTTCTCTCCAACAACACTTTGG 28958 30 100.0 36 .............................. AAGTATTCCAGGAGCCGTGCTATTAGGGATGTACTT 28892 30 100.0 36 .............................. GTATAACATGCTGCGATTAAATCCAAACGTATTATT 28826 30 100.0 35 .............................. ACTGAAGAACCACACGTTTTCATCATGGCAATCAA 28761 30 100.0 37 .............................. TCTGGTGGTTTTGGTATTGGTTTTTGGCTTGGTTCTG 28694 30 100.0 38 .............................. TAATCCGTTTGTTTATGCGTTCCATCAGGTAGATGAAT 28626 30 100.0 36 .............................. TATTTAGGACTTCCCGTAGTGATCATAGTTGTAGGT 28560 30 100.0 37 .............................. ACATTGAAGCTTGTATCTTCTAAATCAGATACGTTTG 28493 30 100.0 36 .............................. GTTCTTATATAATTCTATTAATGCAGTTGAAAAAGA 28427 30 100.0 37 .............................. AGTAATCGCTGCATAGCTCCTGGGAAAGAGGCTCCTT 28360 30 100.0 35 .............................. TTAAACTGCCTATTAAATTTCCAAATTTTTTTATA 28295 30 93.3 0 T...................A......... | ========== ====== ====== ====== ============================== ====================================== ================== 14 30 99.5 36 GTTGAACAGAAACATAAGATGTATTTAAAC # Left flank : GGAAATTCTTTTATTCCATTTAATCTAAAGGAGAAAAAATAATGAAAAATCAAATGAATGCTAATTATGCGTTTGTTTTTTATGATGTAAATGAGAAACGAGTGACGAAAGTTTTTAAAATCTGTAAAAAATATTTAAATCATTATCAAAAATCTACTTTTAGGGGGGAGATTACTCCCTCAAATCTATTAAAAATGGAAAAGGAAATTAGGAATATTATAAACGAGGGGGAAGACTTTATTACTATTATCAAAATGCTAAATGAATATAGCTTTGATGAGATTGAAATAGGGTATAGAAATAATAACGATCTCCTATTTTTGTGAATTTACCAAGTGAAATGATAGTGGGAGTCTAATAAACTTTGTTAAATCAAGGCTTACACTATTTTTTTTTGAGAATTCTATTTTTTATGAACGGCTGGTAAAAAAATCACTAAACTCATATGCAGTATAGTATTATATAGATTATGAAGGTAATAAAAAGTTGATTTAATCGGT # Right flank : TTTTGGTCTATTGATTTTACCGTAAGTACGTAACTTGTTGAACAAAATTATTAAATTAGAATTGATTTTGAGTAACTCAATAGATAAGCTGTTAAAGAGAGAAGTTTTTTCATAGAAAGGGGAATTAGGAATAGGAAAAGTTATGCCCCTGCAAAGTATTTTGAAACAGGAACAAAATTGATTTCGTTTTAATAATAATTTTGTCTTTTTCATCAACTATCGTGGATAAATCTGCATGACATGTACAATAGTTGATGTTATAATAGGTGTAGAAGTATTATAACAATAGTTTTTGCATAAACTAAAGAAGACGAGATGCTCCAACATCTCGCCTTATGTAACTGCTACCGCAAGGTGGATGGTTGCTAAAAAGAGTTTATTTTTTCTTAGAATCATCCTTCAAACGCTTGCCGGCATTGTGGGTGGTTCTTTTCGTTTTTCGTCGCTTTTTTTGTATTTGCTTCCAAGACGTTGATAGGTATTTACCTACTCGTTTTGCA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAGAAACATAAGATGTATTTAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 2 39935-38330 **** Predicted by CRISPRDetect 2.4 *** >NZ_QORY01000032.1 Bacillus sp. AR2-1 AR2-1_contig_32, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 39934 30 100.0 36 .............................. ATATTTGGTTTCGGTGGTTTTGAACCTTCTTCATTT 39868 30 100.0 36 .............................. CGGCGAAAGGTGCTGCTAGTTTCAATAAGAAACCAA 39802 30 100.0 36 .............................. TAACAGGATCTCTTCCTACAGGTTGCTCTCTTTCTG 39736 30 100.0 35 .............................. TTCTTATGGAAGTGGTATCCGTGCTCCTCAAGCAT 39671 30 100.0 36 .............................. CAAATCATAGCAGCTAGAGAAGGTATGCAAGTATGG 39605 30 100.0 36 .............................. TCAGGTAAATCGGGCAAATTGTCCATCGGGTCTTTT 39539 30 100.0 34 .............................. ATATTTTTCAAAGCATTGTTTATATCTTCTAAAG 39475 30 100.0 35 .............................. TTTAAACCGCCTCCTGTTCTTGTTCTTTCTTCAGT 39410 30 100.0 36 .............................. ACTCCTTATCCTCCTGGTCCCTTACGGGCTCAGTCC 39344 30 96.7 35 ................A............. TTAATGAAGAGGCACCTGATATCCAACTTCATACA 39279 30 100.0 36 .............................. CCTTACACGATTTTACGACGTGTATCACTTGACCTG 39213 30 100.0 35 .............................. ATGTTTGTGTTATGTTTTTGTACCTGGCATTTCTC 39148 30 100.0 36 .............................. GGTGGCTTGATAACGGGCATCGATGTTGCGGTGTTT 39082 30 100.0 37 .............................. TCTTTAGATGGGGGTAAAGTTGAAACAAAAGGTGTTG 39015 30 100.0 35 .............................. GCTTTAGCGACTTATATCTTATTGCACTTTGAATG 38950 30 100.0 36 .............................. ACTCTACTTCTGTTGTAGACACGGCTTCCGCAAAGG 38884 30 100.0 37 .............................. CTTAAATTGTCAGTTCCGATATTGCCTTTCAACGTAT 38817 30 100.0 36 .............................. AAAACAGCGGTAGGTTTTTCGGCAGCAGATTTAATT 38751 30 96.7 35 ................A............. TTAATGAAGAGGCACCTGATATCCAACTTCATACA 38686 30 96.7 35 ................A............. TTAATGAAGAGGCACCTGATATCCAACTTCATACA 38621 30 96.7 36 ................A............. AGTAATTTAAACGAATTATATTTATACTTCCCTTTG 38555 30 96.7 34 ................A............. AAAATTCATTTTCAGATATTAAAGGACACATGTT 38491 30 96.7 34 .................A............ TAATACCACAAATTTCCCGAAATTCGGTCATAGA 38427 30 93.3 36 ........G.......A............. TACAAATCTTATCATAACGTATGATTTAAAGAATTT G [38426] 38360 30 76.7 0 A.....T.GA......A........A...A | G [38337] ========== ====== ====== ====== ============================== ===================================== ================== 25 30 98.0 36 GTTGAACAATAACATATGATGTATTTAAAC # Left flank : AAAAGTATATAATCCTTCTTAAACTAGTAGCTGAATGGATAAACCAAAGGCACACCCCTTAATGGGGTGTGCCTTTTTTCGTAGAAAGGGGAAATCTGAGTGGATAAAAAGAAAAAGCAGCGTGTGAGAAGAGCTATTTTTATTGGAGTAATCGCAATGATTGTATCGTTATACATTGGAAACGAATTTCAGGATCGAAATGGGAAAAGTTATGCTCCTGCAAAGTATTTCGAAACGGGAACAAAATTAGTTTCATTTTAATTTTTTACATATTTTCATCGAACAATATAGGATAATAAGGAAGTTACCGAATATTTTACCAGATTATTTACCAACCTAAAGTATTGGTGATAACATGTAAATGTAGATAAAGTAAGGGATTTCTGTATGAATTCTAAGTTAATGAGGTTTATATCAATTAGCTGGTAAAAAACGTATAAACCCACGATTTCTATAGTATAATAGTGGATGCAGGAAATAAAGAGCCAGTATTATTCGGT # Right flank : CTAAAAAATGTTATTGGTTTAGGAAGTAATCTGGTTAAATAATAAAGTAGAAAGTATTATAATTTCGAAATAAAAAAGCACACTCTTGATTTGTACTGACCTCTATAAAATGGACAGTTTAATAAGAGTTGTGCTTTTTTATTTAAAATAGAAATATAAGGTGGGGAGGATAGGGTGTTGAAGGAGCTTAGTATAATTTAATTGTTTACATTTTTGTAACATAAATAAATCGTAATATTAATTATAATATGATATCCTATTTTTAGGAGGTGTTAAAATTTGAATTTTGAGTTAATAATTACAACTTTATTGAAAGAAGATCTTCATTATGAGGATAGTTTGCAATTAATTGGTAGTTTCATCAACAAAGCGATGCTTCGAAGTGAAAAATTAAAAGCCTTGCATGAAAGAAAAGGTTATAAAAATTATGTTTTTAGTAATTTTTATCCATTTGAAAAAGATAAAATATACAAAAGTGGTCGAGTGTATGTATTTCGATT # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAATAACATATGATGTATTTAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [12-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //