Array 1 159797-161798 **** Predicted by CRISPRDetect 2.4 *** >NZ_VSVN01000003.1 Ligilactobacillus salivarius strain FJLHD16M3 Scaffold3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================================================================== ================== 159797 36 100.0 30 .................................... TTTGAGGTGACCTAATGGAACCAATACTAG 159863 36 100.0 30 .................................... TCAGAAACCACACACGAATATCAAAACATA 159929 36 100.0 30 .................................... CTAAGGATGAGATATTTTTACTACCTAACA 159995 36 100.0 30 .................................... AAATGTATACAAAAAATCGACAATATTTGT 160061 36 100.0 30 .................................... GGCTAATCTTGCATATTATGACTTGGATGC 160127 36 100.0 30 .................................... TGTATCACCACCATTAGAAACTAAAGAACT 160193 36 100.0 30 .................................... GTGCTTGTATAATTGATACATCAGTCAATA 160259 36 100.0 30 .................................... CTGATACAGTCAAATTAAATCCTATTAAGT 160325 36 100.0 30 .................................... GATTGTTTCTGGCGCTAAAACAATTTGGAA 160391 36 100.0 30 .................................... CGTTCAAAACGCAATAGATGTAGCCATTAA 160457 36 100.0 30 .................................... TCCAGGTAGTGAGATACACGCTATTCATGG 160523 36 100.0 30 .................................... ATCAATTACGGTGTGGGCCGACGATGAGCA 160589 36 100.0 30 .................................... ACAATTTGTTAGAGAGTTACTTGAAGTCAA 160655 36 100.0 30 .................................... AAACACTCCAAGTGTTCAAGCAGCTAGAGG 160721 36 100.0 30 .................................... TGCTTTTTCATGGTTTTGGTTCGTTCACGC 160787 36 100.0 30 .................................... GTATGCAAATCTATAATGCTGCTTATTATA 160853 36 100.0 30 .................................... CCTACTTCTTTTTTATTAATCGCATTATTG 160919 36 100.0 30 .................................... AAACTGTTTTATTAACGCATTAATGAAGAA 160985 36 94.4 30 ........C...............C........... AAACTGTTTTAGTAACGCATTAAGGAAGAA 161051 36 94.4 30 ............C...............C....... TATCACAGAGAGTTCTCCAGCAACATTATT 161117 36 97.2 30 ..................C................. GAAATAAAAAAGCCCAGAGCATAAAGCCCT 161183 36 100.0 30 .................................... TATCACAGAAAGTTCTCCAGCAACATTATT 161249 36 100.0 30 .................................... CGATAAGATTGCAGAAATTACTAACTTGAT 161315 36 100.0 30 .................................... GAACCATTTACTTCATACGTGATGTTGGCG 161381 36 100.0 30 .................................... TATCTAATGTATTTTATGGATCACGTCAAA 161447 36 100.0 30 .................................... AAGTTCACACGAAAAGCCCTATGACAATAC 161513 36 86.1 29 ..........T.........T...A......G.T.. ATCTGCGTTCAGTTGGTGTCTCAATGCTC C [161546] 161579 36 94.4 82 ........................A..A........ ACAACTGGAGTTTGAGTACGTTTAGCTTGTGTTTCAGAAGTATGTTAAAAACCTATTATATGTTATAATATGAAAGTGTTTA 161697 36 83.3 30 .....G....T.........T.........G.T..T AGTAATTCACCGCTAGTTAAGTGGTTTTTT 161763 36 80.6 0 ..........A.........T...AG...CG..G.. | ========== ====== ====== ====== ==================================== ================================================================================== ================== 30 36 97.7 32 GTTTCAGAAGGATGTTAAATCAATTAGGTTAAGACC # Left flank : AACAGACCGAATTAGTAAAAAGTATATGAATGTATTAATTAAGAAGATTATTGAAGACATCACAGACGATGAAAGACAAGCAATACTAAAATCAGTAAATAGTTTGTATGATCGTATTCGAGAGGTTTTGTATAAAATTGATATACCATTACAAGTAGATTATGACAATGATTTAACAAGACTATTTAAGTATTGTCAGGTACATACAGAGGCATTGCTATGGAAAAATGCGTATGATAGAATATCTTCAGATGTTAAATTGCATGTGGAACTAAATAGAGAAAGAATTATAGGTCTAACCAATGTCGCACATTATCTCACTAAAGAAGAGTTTCAGGAACTTGTAGGTCTTGTTAAGGCGACTAACTCATCAATGTTTATAATTGAATTCACAGAAAAGAATGGTCAGAGATTCTTTGAAAGCTGTGATAATTACTACATTGATGAGGATTATATTGATTGGTACTAACGAATCGTTAAATTTTGATTATAAAGTAACG # Right flank : CTAAAATACAAAAAATATTTCATAATATTTATAAATCTATCAGAAATTTTCTGGTAGATTTTTTTAGTGTAAAAATTTTTGAGTTTAAGATATATTATGGTTGATAATGTAATATTATATGATATATAATATAGTTGAAGATGAGATATAAAAGAAAGTGAGGGATGATGATGAAAATTCAAGTTAGTTCTGATTTACTAGATGGTTTAGTATTAGCGCTTTTAGATAAGCAAGATTATTATGGATACTCATTGACACAGGATATGCAAAGAGCAATTTCAATTTCAGAATCAACACTCTACCCAGTATTACGAAGGTTAAAGAATAATGGTTTATTAGAAACATATGATCAATCATATCAAGGGAGAAATCGTAGATATTATCGCATAACAAATAGTGGGGAAGAACATTTAGGAAGAGTTAAAAAAATGTGGAGCGACTACAAAGTTAGTTTAGATTCAATTTTCGAAAAAAACTAGGGAGGGGGAATAATAATGAAC # Questionable array : NO Score: 6.03 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:-0.11, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGGATGTTAAATCAATTAGGTTAAGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.70,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-24] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [73.3-85.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //