Array 1 1006474-1008447 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP033926.1 Chryseobacterium joostei strain DSM 16927 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== =============================== ================== 1006474 47 83.0 31 A.G.....AAAA....T...............A.............. TTCTAAAACTGTCAACCCCACATCATATGGC C [1006488] 1006553 47 100.0 30 ............................................... CAAAATTCAGAGGGAAGTTCATTTGTTGCA 1006630 47 100.0 30 ............................................... AACCACCTTATTGATGCATGTAGATATGCT 1006707 47 100.0 30 ............................................... TTAAGAGTTTCCGAACCGTCAGCATTTTTA 1006784 47 100.0 30 ............................................... AATAAAGTTCTCAGGAACCCTAATCATTGC 1006861 47 100.0 30 ............................................... TCCCACTAACATCGCTATACCCTTAACCGA 1006938 47 100.0 30 ............................................... CTCCTGAGCAAGTTTCTTGATAAGTAGTGA 1007015 47 100.0 30 ............................................... CATCAACTGATTTGAATCTATTCATATATA 1007092 47 100.0 30 ............................................... TATAATAGCGTACAGGGTTCAATATAGATA 1007169 47 100.0 30 ............................................... TGGAAAGCTTCAAAGCGTCGTAACTGGAAA 1007246 47 100.0 30 ............................................... GAAATTTCCGATAAGGCTTTAACTTGTCCT 1007323 47 100.0 30 ............................................... TTTCTCAAAACAAAAAGTGTAATAAAAGCG 1007400 47 100.0 30 ............................................... AGTTAACATATTAATTTATTTAAGAACAGG 1007477 47 100.0 30 ............................................... GGCTTAACTCCTGTTATAGTCTTTACTTTA 1007554 47 100.0 30 ............................................... TCATATTATTATTTTCTAATTGGCATTCTA 1007631 47 100.0 30 ............................................... TCTTTTTTCCCCTTCAAAATCTCTTACATT 1007708 47 100.0 30 ............................................... ATTACAAAGTTTTGTTCTTTGTTCATATTC 1007785 47 100.0 30 ............................................... ATTTTAATTCTGTACCACCAATTGACGCAT 1007862 47 100.0 30 ............................................... GTAGTATAAAAACAGAAACCTACAACACTC 1007939 47 100.0 30 ............................................... CAAATTTTAAAAAATATAGTAGAAAATGAG 1008016 47 100.0 30 ............................................... CGGGCAAGGTATTATGAATTTTCGCGACAA 1008093 47 100.0 30 ............................................... TAGTAAATAAAGACGGTACAACCGTGTCAC 1008170 47 100.0 30 ............................................... TTTTGTGAAGAATACCTGCGATGCGGTACA 1008247 47 100.0 30 ............................................... ACCCTGTCTCATAATCACAATATTTGCGCT 1008324 47 100.0 30 ............................................... ATGTTACAGGAAGTAGAGCTGTACTACAAT 1008401 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== =============================== ================== 26 47 99.3 30 GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC # Left flank : GATCAACTTTAATGGAAGTCATATCAATATTGAAGTTTCCAGCTACAACTTGTCCACCCTCAATGCTTAGATCCCCTGATTTTACGTTAAGAGTTCCCCAACGAGGAGCAAAACCTCCTTTATGGAATGCTTTCCAGTTAACGATAGAAGTTGCTGCATCTACTGCCAACACTTCTCCTTTGCTTTCTGCAACAGCTTGCTCAGTAGCTACCGCTGTCTCTGTTTTTTCTTTATTATTACAAGATGCTGCTAGCAATCCTACTCCTACTAATGCAATTACACTAAGTTTTTTCATATTATTGAATTGTTTAAAAAAGTTTAATCGAAATTTTTCTTGTTGTTTTTCGGATACAAAAATAGAAAAACCATATTTCTGTCATCTTAACATATATCAAGAAATGATTTTTTTTATATTTTATTGTTCATTTAAGAAAAACAAACAGCAAAATAGTGAATTTATTGCTTATTACAATGATAATTGAGAATTTTGGATAAGAAAA # Right flank : CCTCAAAAAACAATCTACTGAAAATCAGCAGATTGTTTTTGTTTTTAGGATTCAAAATTTAGAATAACTCAAGCTGTTGAAAGGTTGGAGGTGGCTCTTCTTTATTTCTGGCAAAAAATATTTCAATATCTCCAAACTGCTTGTCAGTGATGCACATAATAGCAACCTTACCTGCTTTTGGAAGCATCAACTTCACTCTTTTAATGTGAACTTCAGCATTTTCACGACTTGGACAATGCCTCGCATACATTGAAAACTGAAATAAGGTAAAGCCATCATCAAGCAAAGATTTACGAAAGCGGTTGGCGTCTTTCATATTGGCTTTAGTTTCTGTCGGTAAATCATATAATACTAAAACCCACATAATTCGGTATGCATTAAACCTTTCGGCATTCATATCAGCTCAGGATAAGAGATCAGGCGTTTTTCTCCTGTATAACATCTATACAGTGATGTAGCGGTTGTTTTTACCGCAACCAATAAGGGTCTGGTTTTATCAT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.78 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //