Array 1 123136-124567 **** Predicted by CRISPRDetect 2.4 *** >NC_017136.1 Acetobacter pasteurianus IFO 3283-12 plasmid pAPA12-014, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 123136 29 100.0 32 ............................. CGGTCGATATTAAGGCGGAAGAGGGGGAGGCC 123197 29 100.0 32 ............................. CCGAGGCAGATAGAGCTGTGGAATGTGTCATG 123258 29 100.0 32 ............................. CACGCTCTCCGTGCCTCAAATCCATTGTGAGA 123319 29 100.0 32 ............................. ATAGCGGCACCTGCGCCAAACCCCATTTTCAG 123380 29 100.0 32 ............................. TTCAGCGTTTGGCCATCAGCAAAAACTACCGT 123441 29 100.0 32 ............................. CGGGGCGGCTGTTGGTAATGCAGACAATCCGT 123502 29 100.0 32 ............................. TCGCCCACGGCCTGCCAAGACTTGCTCACTTC 123563 29 100.0 32 ............................. GCGGTGGATAGGCCTTCCATATCTGGCAGGTA 123624 29 100.0 32 ............................. CCCGCGTAGCATGTTTGCGCGTGCACCGCCTG 123685 29 100.0 32 ............................. TCGGGCGTCTGGCCGGTCGCTGAGGCTCTCAA 123746 29 100.0 32 ............................. CCGCCTGACCGTCTGACCTCCTGACCGCCTGA 123807 29 100.0 32 ............................. GCGTATCGGTCACAAATGCAGAACCGGCTGGC 123868 29 100.0 32 ............................. ACGCGCGCGGCGGGTAGTGTAAAGAACAGCGC 123929 29 100.0 32 ............................. CCCCGACCGTTGGCAATATTACCATCACGCCT 123990 29 100.0 32 ............................. ATATTTGGACAGTTCGCCCCGGCTGGTAATGT 124051 29 100.0 32 ............................. TCGCAGCGGAAATCATTGTTGGCAATAATGCC 124112 29 96.6 32 ............................A CGTGGCCCATGCATTCTTCTCTGGTGACGAAC 124173 29 100.0 32 ............................. TAACAACAACCTAGCCGCCGTGGTAAATACCA 124234 29 100.0 32 ............................. CAGCACAAAGCCAGAGACCAGAAGGTTTATGC 124295 29 100.0 32 ............................. ATCTTGGGTTTGTTGACTTCCGGCATCGTGAT 124356 29 100.0 32 ............................. AACAGCCCCGCATACCGGCGCATATTGACGCA 124417 29 100.0 32 ............................. AATTGCCGGGTCTGGCCGCTACCTGCAAACTG 124478 29 100.0 32 ............................. GCTAAAAATGGGTGATTCCAAAACCAAAACTA 124539 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 24 29 99.9 32 GTGTTCCCCGCACACGCGGGGATGAACCG # Left flank : TATTGGCTGCTGGTGGAACTGAGGCACCATCCGTACAGCCTGAAGCAATGCCGGTTGCTTTCGCAGATCCGAAAGGTTCGGGTGATGTTGGTCATCGTGGTTGAAAATGCTCCGCCACGTTTGCGTGGGCGGTTAGCTGTATGGCTTCTGGAAGTGCGGGCTGGGGTTTACATTGGCAGTTATGGCCGGCGTGTGCGTGAAATGATATGGGGGCAGGTTTGCGCCTATATTGAAAATGGCAATGCTGTGATTGCATGGGCGGCCCCCAATGATGCTGGGTTTGAATTTGATACCTGCGGTAAGAATCGTCGCGTGCCTGTAGATCTTGATGGCTTGCGTCTTGTTGCTTTTGGGCCTGAAGCCGCTCTTCCTATACATCCTGGACCAACAACGACAATGCTTCCAAGGCGACGTGGAAAAGGGTAATATACCAACTCCATTCAGTTGGTGGTTTCTTTGACAATAGAATAATTCTTTAAAATCAACTATCTTCACGAAGA # Right flank : GACGCCTAACATGTCTAGGTGTTTGGTCCCGGGGTTTGATGGGTTGGATTGATGATGAATCTTTCTGGCTCTGAAGTCCATATTTTGCAGAGGTATTCGTAAGGCGTGAGGCCACTCAGCGTCTTGAGCCTTCGCCCGAAATTATAAGCTGCCATGAAGTCGTTGAGGTGTGTCCTCAACTGCTCATGACTGTCGTAATGGAAGCGTTTGACGGTTGCCTCTTTGATTGTCCGGTTCATCCGTTCAACCTGACCATTGGTCCAGGGATGATTGGGTTTCGTCAGACGATGTTCGATCCCGTGGGCTTCGCAGATCATGTCGAAGCGCATGGGACGCGACCAGGCCGTATTGCGATTACGGGGTTGGTCAGCGAACTGGATCCCATTGTCGGTCAGGATGGTGTGGATCCGGTAAGGGATGATGCTCAGGAGATGTTCGAGGAATTCCCAGGCCGTCTTCCGATCAGCTTTCTCGACCAGTTGTGTGACAGCGAATTTGCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCACACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //