Array 1 1-387 **** Predicted by CRISPRDetect 2.4 *** >NZ_FZPH01000005.1 Asanoa hainanensis strain CGMCC 4.5593, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 1 21 56.8 37 ----------------..................... ATCTACGTGCTGTCGCTGGTCCTCGTGGTGGCCGGCG 59 37 94.6 37 ...A......C.......................... ACCCGCGTGATCGCGGGCGTGGCCGCCGGCACAACCA 133 37 94.6 35 ........A......T..................... AAGGGCGCCGCGTCCGCACGGTCATGATCAAGGTC 205 37 94.6 37 ....................G.......T........ GGCTTCCAGTCGGCGTCGCTCACCGCGCGGCCCTCGC 279 37 100.0 36 ..................................... ATGTGGTGGCGGTCGCCCTTCGTGCCCGCCGCGGTG 352 36 91.9 0 ....T...-................A........... | ========== ====== ====== ====== ===================================== ===================================== ================== 6 37 88.8 37 GCTGCGCCCGGCGTTCGCGCCGGGCGAGGATCGCAAC # Left flank : | # Right flank : CGCCGGTATAGTCAATGCGCAATCCCCGCTTGCGCCGCGACCGCCAAGATCGATTTGGCTAAGGTATCGACGGCGGCAGCGTTGGACTGACTCGCAGTTGATGCAAGCCCAACGACGTACGGAGCTTCTCCATTGCACCTCAAGTCGATTGTGTCCACCGGTCCCATCAAGCGGTTCGAATCCGTCCGAATTCGCGACCTCCCGCCGTCAACGCGGCTAATCTTCTTGCTGGGCCCCAATGGATGTGGAAAGTCCTCGATATTTGACACCCTGTTGCTTTGGCACCACGAACATGGGCGTCGCGCAGGCGGTTGGGACGATCAGTTCTACCTGCCTCCAGGGCGCACTCGAACGAGTGGCATCGACATAGAGTTTCACGAGCCTTTGCCCAAAGACACTAGGGCAATCAAGGCGCTTTTTCATTATCGGAGCGCCTACAGGTACACGAGCCAATTTTCGGTCGGAAGCCTTAGTGCAATGCCCGGCTTGGAAGACAGCAA # Questionable array : NO Score: 3.61 # Score Detail : 1:0, 2:3, 3:0, 4:0.44, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGCGCCCGGCGTTCGCGCCGGGCGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GCTGCGCCCGGCCTCCGCGCCGGGCGAGGATCGCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 57278-56943 **** Predicted by CRISPRDetect 2.4 *** >NZ_FZPH01000030.1 Asanoa hainanensis strain CGMCC 4.5593, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 57277 37 100.0 38 ..................................... TTGCAGCGGCCCTGGTCCCTTGTGGAGGCGGCGCAGGC 57202 36 94.6 38 ...............A-.................... ATCGAGGCCCTGTGCAAGGTCACGAAGGACTCGATCGC 57128 37 97.3 38 ............................C........ CAGCGGGACGGCCGAACGGTCGTCGTCATCCGACGCGG 57053 37 100.0 37 ..................................... CGGTGGCACCTGCTCCCGTACGCGATCGCGGTCGGCG 56979 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 5 37 98.4 38 GCTGCGCCCGGCCACCGAGCCGGGCGAGGATCGCAAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGCCGGGCGAGGATCGCAACGGCGGCCATGGCGGGTGTGATGCCCTGCGCGATCAGC # Right flank : GGCACGCGGCACAGCATCGAGACCATCGGGGGATGGCTGCGCACGGCCACCGAGCCGGGCGAGGATCGCAGCGATCGTGCGCCGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 5.98 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGCGCCCGGCCACCGAGCCGGGCGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GCTGCGCCCGGCCACCGCGCCGGGCGAGGATCGCAAC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-16.70,-16.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [25.0-26.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.87 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 59544-59281 **** Predicted by CRISPRDetect 2.4 *** >NZ_FZPH01000030.1 Asanoa hainanensis strain CGMCC 4.5593, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 59543 37 100.0 36 ..................................... CAGTGGTTCGCGGCCATGCGGACACGGACGCCGGGC 59470 37 100.0 37 ..................................... CACCACGAGCTGGCCCGCTGCACCCACGGCGAGGGCT 59396 37 100.0 42 ..................................... CACGCCAGTGCTACCGCGCGGATGGCCGCTCTCGGAGAGGTT 59317 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================== ================== 4 37 100.0 39 GCTGCGCCCGGCCACCGAGCCGGGCGAGGATCGCAAC # Left flank : G # Right flank : CCCGACCCGATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGCGCCCGGCCACCGAGCCGGGCGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GCTGCGCCCGGCCACCGCGCCGGGCGAGGATCGCAAC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-16.70,-16.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [5.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 54703-55402 **** Predicted by CRISPRDetect 2.4 *** >NZ_FZPH01000009.1 Asanoa hainanensis strain CGMCC 4.5593, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 54703 29 100.0 32 ............................. ATGGTCAACTTGACAGAGTTGACGGGTGCCAA 54764 29 96.6 32 ............................G TACTTCGCGGTGCGGCCCTCGTCGTGCCGGAG 54825 29 96.6 32 ............................T ACCAGGGCCCGATCGCGGAGACGGTCGGGCTC 54886 29 100.0 32 ............................. CAGTTGCGCCGAGACTGGCGCGCTGGCGTGCC 54947 29 100.0 32 ............................. TGCTCACCGACGGAGGCCAGTGATGGCGGTCC 55008 29 96.6 32 .............C............... TGCTCACCGACGGAGGCCAGTGATGGCGGTCC 55069 29 100.0 32 ............................. AACGGATTCGGGATCCCGCTCGGCGTGGCGGT 55130 29 96.6 32 ............................T AGATGAGCGCCAGCAGTAGCAGTAGCGCCATC 55191 29 96.6 32 .....................G....... TCGGCGCTGCCGAGGCGAGTCTCAAGTGCGTC 55252 29 96.6 31 ............................G GGGGCGTGGCGTGAGCGAGCGAATCCTGACG 55312 29 89.7 32 .............C.A............G GTCGGCTTTCTGCCCGGCGAGTCCGGCTGGGC 55373 29 93.1 0 .........................G.G. | C [55396] ========== ====== ====== ====== ============================= ================================ ================== 12 29 96.9 32 CTGCTCCCCGCGCACGCGGGGATGGTCCC # Left flank : GGTCCTGCGTGGCCTGAAGATCTCGGTCCCGAAAAAGATGTCGGTAGTCGGCTTCGACGACGTCTCAGTCGCGGCGGACCTGGCACCGTCGCTGACAACGGTCCGGTTGCCGATGACTGACATGGGACGGATGGCGCTAGAGCTGGCCCTCAAACCACCGTCGACCCGAGCCCGCCGCAGATCGACCGGCCACACCCTAGTGGTCCGCGACTCAACTGGCCCACCCCGCCGCTAACGCGTGCCGCCGGCCGGTCCGACTGCCTCGGACCATAGACCTCCGCTCAGACGGATCGGATACTGAGCATCGTTAGCGTCGACATGCCCTTCGAGCGCGTAGCGCGGAGCCTTAAATGGGTGGTTGCGCGGAACCCGACCACACAGGTAGAGGCAAGGAGCGGAAGCCACCGATCAGACAAGCCCCAAGCCTCGGATCCACTCACCCGAACTTCAAAGTGAAGCAAAAAGAGGAACTTGATCTCTAGCGCCCCAGGTCAACAAGT # Right flank : CGGATCCCGGCCGGCCGGGCCAGCACGGCGACCGTAACGAAGGACCGAAAGCGATGCCCGGCTGCGCACCGCGATCCGCGCGCCAACCGTACCCTCAGCCCGCTTGTGAAGATCCGGCCCAGATGTTGAGGTCCGACTCGGTCGCGTGGCGGTCGATCTCGCCCAGCTCCTCCGCCGTGAAGCTGAGGTTGTCCAGCGCCGTCAGGCTGTCGTCGAGCTGCGCGACGCTGCTGGCGCCGATCAGCGTCGAGGTCATCCGCGGATCGCGCAACGTCCACGCGAGCGCCATCTGCGCCAACGTCTGACCCCGGCCAGCGGCGATGTCGTGCAGCGCCCGGATCTTCCGGAGGTTCTCGTCGGTCAGCCAGGCCGCGTCGAACGACCCCTGCCGGGCGGCGCGCGAATCGGCCGGAACCCCGTTGAGATAGCGGTCGGTCAGCAACCCCTGGGCCAACGGCGAGAACCCGATGCAGCCGACCCCCTGCTCGCCGAGCACGTCG # Questionable array : NO Score: 5.65 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.54, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCACGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //