Array 1 151797-152008 **** Predicted by CRISPRDetect 2.4 *** >NZ_RHNW01000005.1 Levilactobacillus mulengensis strain 112-3 contig5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 151797 28 100.0 33 ............................ TGAGGACAATCCCGAAATTCAGTTAGGAGCCAG 151858 28 100.0 33 ............................ CCAGGTATAAGTCGGATAGGTTTTAAGATTGTA 151919 28 96.4 33 .................A.......... CGACACGTGGGATGAAGATGCTCCCGAATCCAT 151980 28 75.0 0 .........A.A.G..T...A.C....A | A [152004] ========== ====== ====== ====== ============================ ================================= ================== 4 28 92.8 33 GTATTCCCCGCGGATGCGGGGGTGATCC # Left flank : GGTAGGCCTTGTACAGCTCGGGATGGTTGACCACCAGTGACGTCCGGTAGTGGCGGTCGGTCATGTACTGACGGACCAATTCCATCAAAACGACGGACTTCCCGGTCCCAGCCGCGCCTTCGATGACGGCAACGGAAGCCGTGTCGCCGTTCAGGCCTTGCTTGATGTAGTCGTTGATATTGGTGATAACAGTCTTCTGGTCGTCGGAAAGGTCATCGACGAAGAACTGTTCTTGTAAAATTTTATTCATACTGGAACTCCTTATGCCGTTATGGAATTTGAAAGACAGTTATTAGTATAGCAGTTATGGGGATGGGTGCTGTTAAAATTGTTGGGAAGCTGTCGAAAATAGGGAAATCGCGGGCTGGAAAAATATATCGCTATAGCGGCAAAGAAATTGATTGTGGTTGGGGGAGGGCTGCTGTATGCTTAGGACACAAGTTAATTGAAAACCGGGTTTTGGTGATTTTCAAAGTGCGATGTGACGGCGTTTGCTTAGC # Right flank : AAAAGGCCAGTTCTCTGCGTGAGAACTGGCCTTTTACAAATAAGATTAGTTGGCTTGAGGGTAGAAAATAGCAGTCGGCATGTAGTAATGCGTGCCGTTTACCAGATAGCCGCAAGAGACTCGGATGCTGCTGGTTACGTCCTTATTACGCTCAGGGGCGTAAGTTGTCGTATAAGTTGTATACTGACGCTTAATTACTGTTAGATACTGAGCGCTACCAGACTTGCTGACACGCTTACCAATTGCGCTAGGAACGGCTTGCTTGGTGTAGAGGTAGGTTTTTCCACTGCCTGAAGGGAGTGCGGCTTTGGTAACTTTGATGGAAGTCGTGGGTTTGGGGTCGACGCCTACGCTAAAGACAGCAGTGTTAGCGTAGTACTCGAGATAGCCATCACTGCTGACGTGAATGCGAGCGGCTTTAGCCGTGCTTTCGTTGCTGGCGTCTGGATACTTCAGTCCAGCAAAGAGGTTGCCATCCTGAGTCGCATTTAATCCAATGT # Questionable array : NO Score: 5.50 # Score Detail : 1:0, 2:3, 3:0, 4:0.64, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCGCGGATGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCATGCGGGGGTGATCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-C/E [Matched known repeat from this family], // Array 2 153140-153411 **** Predicted by CRISPRDetect 2.4 *** >NZ_RHNW01000005.1 Levilactobacillus mulengensis strain 112-3 contig5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 153140 28 100.0 33 ............................ CAATCGTTGATCCCTTGGTGTTCTTCTTGAACG 153201 28 100.0 33 ............................ TTGGCTTGCCGGCCTTACGTGCCTTACGGAGTT 153262 28 100.0 33 ............................ TGAAGATGGGCTACTCACAGTCATATATCAGTA 153323 28 100.0 33 ............................ TTCTTTTTAAAGGTGTAAGTCCATCTAACCTTA 153384 28 82.1 0 .........A......T.....C...TA | ========== ====== ====== ====== ============================ ================================= ================== 5 28 96.4 33 GTATTCCCCGCGGATGCGGGGGTGATCC # Left flank : GGTAACTGAGTGTATCCATTTGAATATCCATGATGCGTTTTCCTTTAAGTGTGGTGACACCGCTGATTTGGACGATGGTACCTTTGGGGATAGTGAAGGCCTTTTTGTACTTGGTTTTAGCAAGAACAATTTTTTTCTTAGCTATCAAAAAATTGCCAGATTTGGCGTTGACATAGCTGGTACTAGCCGCTGCTGTGACGCCACCGGTTAGGGCTAATCCGAGTCCAATTGCACCTATAGTAACTAAAATGTTCTTAAGTTTCATATGTAGCTCCTCCTAAAAATGGTACCTTAACTACTCTAAGTATACGCTGCTAGGGTAAAAAAATCTGAGGTTAAGCGCTGGGAATTGATGTTGGTGTAAAGTGGTTAAGGTTTTCGCTATAGCGGCAAAAAAATTGATTGTGGCTGGGGGAGGGCTGCTGTATGCTTAGGTAGAAGTTAATTGAAAACCGGGATTTTGTGATTTTCAAAGTGCGGTGTGGCGGCGTTTGTTTAGT # Right flank : AATTGTAAGTTCATTTTTTGAATTAATGTGCCATTCAAAAGTAAGAAAGCTAAGTATTTCTCTATTTGTAGAATATGAGTACGAAAATATTTTTACATTTCGACAGTTAACGTTGTGCTATAATTATGGCGTGAGTTGGTAAGTAACAATCATTTCTAGATGGAGGGATATACAATGAAAATTAAACATCTTGTAGCTGCTGTCGCAGTATGTTTTGGTGTTGCGGGGATGGCTACGACTATATCAGCCGCACAGCCAGCGAGTGCCGTGACCACTAGTAATAAAAATTTTCGTAAATATAAAACTATGCCGAAAGCTTTGCGTGGTACTTGGCAAACCAAGGGATACACTAAATATCGTAAGGGAATCAAGTCCAATGCTACATATCAATTTAATAAGAACTCATATACCCTAATCATGAAGTTTAAAGGTGGTAGTGTGAAGTCTAAGACCATCCACTTCCCAAAGAATCAAATCGGTGGTATGTGGTATGAGAAGCA # Questionable array : NO Score: 5.88 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCGCGGATGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCATGCGGGGGTGATCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : I-C/E [Matched known repeat from this family], // Array 1 173624-175110 **** Predicted by CRISPRDetect 2.4 *** >NZ_RHNW01000006.1 Levilactobacillus mulengensis strain 112-3 contig6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 173624 36 86.1 30 .T...C.A.CT......................... ATGAGGCCGCAAAAGTGACTACCGCTGTGA 173690 36 100.0 30 .................................... TATTCAAGATGCTAAGTGGGGCAGTGACCG 173756 36 100.0 30 .................................... GCGGATGATGGGTATGAAGTTATCTATCAG 173822 36 100.0 30 .................................... TGTAATTGTGAGGCATGCTAGGATCAACCT 173888 36 100.0 29 .................................... CTTGTTAATGAGTAATGGTTATTATGCCA 173953 36 100.0 31 .................................... TTATCGGAGCCTTTGAATGAACCTGAAGTTA 174020 36 100.0 30 .................................... GATGATTTTTTTCAATCATTGTGAGCAGCG 174086 36 100.0 30 .................................... GGTGAATACGAGTTCATTGGTCAATATGAG 174152 36 100.0 30 .................................... GGGGAAGCCGTGCAGACCAGTGCAATCTGG 174218 36 100.0 30 .................................... TAGCTTTGATTTTCAAGTGACTTGATAGCC 174284 36 100.0 30 .................................... TAGGCATTGACCTAGGCGAGTGCTATAGCC 174350 36 100.0 30 .................................... TTCGGCCAATTGCTTTGGAACATCATAACC 174416 36 100.0 29 .................................... AAACCAGTGCTCTTTAGCCCGCGAAAAGT 174481 36 100.0 30 .................................... GTCAGAAAACCTAAAAAGTTAAACATTTTA 174547 36 100.0 30 .................................... TACCTCGCGACCCCAACCGGCTACTACGTC 174613 36 100.0 30 .................................... AATGAATTTTGATTAAGGTGTCATCGCCAA 174679 36 100.0 30 .................................... TGGGAGCGCGTCGGGGAAATAGTGTAGCGC 174745 36 100.0 30 .................................... CGTTGCCCCAAGCGATGCAGGACCGCTATG 174811 36 100.0 30 .................................... ACCAGCGCGCTCTAAGCCAAGCCGAAACCC 174877 36 100.0 30 .................................... TCAAAAATAAGTTGCTGTTCCGGGTTATCT 174943 36 100.0 30 .................................... AACAGGTTGACACCATCAGTGACCAAAACG 175009 36 100.0 30 .................................... GGTACCTCAGAAAACACCACATCAAGTACT 175075 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 23 36 99.4 30 GCTTTAAGTTCCTTTCAAATTAGGGTATAACAGAAC # Left flank : CGCTGTTCTCTCTTTTTATGTGGTGATTAATTTATATGGCAGTTAGTTAGTCGAGTTGCTTAATCACGCGCGCTGGATTACCGCCGAGGACCACGTCAGAGCAGATAATGATGCCCCCATCACCTACCCGCACATCGTCACCTGTTACGCCAAACATTTTCTTAATCAATCTTTATTCCACTCAGGGTATTTTCCCCTAGTACATTAAAAACTTCGACCTTATCATGAACACCGCCCCGTTCTGCTACTAGCTCCTCATCGTAATCCTTGCAGAGTTCACCCATGATTATTCTTTCTTTTCACTCTTACCGTACTAGGCACTCCAGTTCTTACAAGTATTCTGTGTTTGATAAATTTTTCGTACTCATTTGGAAAATTTGCGGGGAAATTCCGATTAGTTTAAGAACTCCAATCCAGACTGTGCATATCCGCTATAATCTTTGAATCTTAGTGCTTGTTAAGGTTCAGCATAAATTGATAATACATCCTAATTATTTTAT # Right flank : CATTTCACACGTTGAGACGCTCAACAACAGTATTTGTCGACCTTTTTCCAAGCACAGAAAGTGACAACGATGTGTGATTCTAAATAAATAAGCCATTGCTGGTTTGAAAACTGCCAGTGATTGCTTATTTATTTTAAATTATTCATAAGATAGTCAAGTCTGAATTTGAAATTTCTTTTTCCTGCTCTGACACGGCGCCAACCATAATTCGCATACTACTAAATTGCTTCTCAGTTAATGTTAGCATACGAACCTGCCCGGCCATAGGGATAAAGTCCGCAACACGTTGTTCGTATTTTTTAGCCATATCTGTCCCGTTAACTAAACGGTAATAGACAGATAATTGCATCATAACAAAACCGGAATTTAGTAGATTTTTCCTGAATTTTTGGGCAGCACGCCTATTAGCCTTAGTCTTAGTGGGTAAATCGAACATTACAATTATTCTCATGAATCTTCTATTCCTCATTCTTATGGACCTGTAGAGTTACTACTTTTGG # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTTAAGTTCCTTTCAAATTAGGGTATAACAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.40,-1.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA //