Array 1 1622-7 **** Predicted by CRISPRDetect 2.4 *** >NZ_JMLW01000004.1 Marinospirillum insulare DSM 21763 BP27DRAFT_scaffold00003.3_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 1621 28 100.0 33 ............................ CCCTGTAGGTATGTAGGGGGGTTACCCACAAAA 1560 28 100.0 33 ............................ CAGGGCAATAATAACACTGCCCCACCAAAAATC 1499 28 100.0 33 ............................ CTCGCTTACCCTTATTTTGTCCGTTGTATTTTT 1438 28 100.0 33 ............................ TAAATATTCTAGGCCGTGAACAGCATTTTTTCG 1377 28 100.0 33 ............................ CAAGTGCCTATGCTATAAGGCTTTACGAGCTTT 1316 28 100.0 33 ............................ CGTATCTGACGGAGCGCCCATCATAGGCAACGA 1255 28 100.0 33 ............................ CAATAAGTTTTTTTATTGTCGGCTGTAGTTTTG 1194 28 100.0 33 ............................ TTTGATATATAGCAAGCGACTGACCGCCAAGCT 1133 28 100.0 33 ............................ CTGGCATCGGGGTTCATTTCAGGGGCTGGTGGT 1072 28 100.0 33 ............................ CTTTAGCGCCTTTTATGCCGCCATCCATGCTGT 1011 28 100.0 33 ............................ TCAGCAAGCTTTAGACCGAATTATGATTGGCTT 950 28 100.0 33 ............................ TCAAGCATTTTAAGCAGTAAAGATTTTGCAGTA 889 28 100.0 33 ............................ TCCGCCATTACTTTCGTGGTTTCGTTTTGGCGT 828 28 100.0 33 ............................ TCAAGCATTTTAAGCAGTAAAGATTTTGCAGTA 767 28 100.0 33 ............................ TCCGCCATTACTTTCGTGGTTTCGTTTTGGCGT 706 28 100.0 34 ............................ CTCGACCAAAAGCCACCTTGCCAAGCCTCTTGAA 644 28 100.0 33 ............................ CACTTCTGACAGTTCTACCGCTAGCTACAAACT 583 28 100.0 33 ............................ TTAATGTTGCGTGCGCTTCATGAACTTGCTGTG 522 28 100.0 33 ............................ CCCGGTGTGATACCAAGCAAGTCAGTAGTTTTT 461 28 100.0 33 ............................ TTCCTGCTGATTCAAAAGCCTGATTTAAGATTT 400 28 100.0 33 ............................ CCTGGCTAGCTGGTCTTGCTGCTGCTGCTGTCG 339 28 100.0 33 ............................ TAAGCGGCTGGCACCACCTTTGGCCGTGCCAGC 278 28 100.0 33 ............................ CCGAAGCGTCCGGGAAGTGCGCCGCTTTAGGCT 217 28 100.0 33 ............................ TGGCGACTCCAGTTATTAATAATGTGGATTTAG 156 28 100.0 33 ............................ TGCGCTCTTTATTGCTAGGCCAGTGCGTTCTGA 95 28 100.0 33 ............................ TCTCTTGCTCGCCTAAGTGTTTATCCGCGCCAA 34 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 27 28 100.0 33 GTCTTCCCCACGACCGTGGGGGTGTTTC # Left flank : TATATAAAGAATACCTGTGTATAGATTTAGCATTTTCATTAACAAGAGACTTGGCGGGGCGTTACAACAAACACAAGGTTTCCAGTGCATTTCGAAGTCGCGTAATAGAGATGGATCTTTTAGCTAAGGTTGCTGTTGATATTCCTGAGCTGTTGGGAGGGAAACGTGCTCGTCGTCATAGCAAATGATTTACCGCCTGCGGTACGTGGGCGTATGAAATTATGGTTTGTTGAGCCGAGGCCTAATGTCTTTGTTTCAGGAATTAAAGACTCAGTTGCAACTAGCGTAATTGATTACCTTTATAAATACTGCCCAGCTAGTTCTGGCGTAATGATATTTAGGTCTATATCTAAACCGCCTGGGTATGAAGTTCGATCTATTGGCCCCACTCGAAAAACAATGACTGAAATCAGTGGATTGCAGTTAGTTATTGAAACCCTTAAAAACTAAAGAACACTAGGTGTTGTGTTTTAACTGCAGATCTTTAACAATGTGTTGCT # Right flank : CTACAGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGACCGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTTCCCCACGCCCGTGGGGGTGTTTC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [5.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 26043-23373 **** Predicted by CRISPRDetect 2.4 *** >NZ_JMLW01000012.1 Marinospirillum insulare DSM 21763 BP27DRAFT_scaffold00011.11_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 26042 28 100.0 32 ............................ GTGTAAATTTAGCTTTATAATTCTTTCTCTCA 25982 28 100.0 32 ............................ TTGCGCTTAGGTGTGTTTTTGTGTAAACAATT 25922 28 100.0 33 ............................ AAGAACAATCGTATAATGCAAGGCATTATAATT 25861 28 100.0 32 ............................ AAGTCGTCAGCTAAAACATTTTCTAACGGATA 25801 28 100.0 33 ............................ CTCATGGCGCTGTCAAGAAGGCTTTTAGTTCGT 25740 28 100.0 32 ............................ GTGGCCGCTGAACTGAGCAACCAAGATGAAAT 25680 28 100.0 32 ............................ TTGTGCATACCTTTCAAGCGTAATACGTTCAA 25620 28 100.0 32 ............................ TGGGCCGTTATTATTGTGCGGGTAAACGTCAC 25560 28 100.0 32 ............................ TGCAGCTTTCTATTTTTAATAAAATGCCTGTC 25500 28 96.4 32 .........T.................. GCCATTTTTACCTGCGTTGCCAGCAAAGCCGC 25440 28 100.0 32 ............................ AAGTTAAACTTAGTAAGTCGCCCGGCCTTAAA 25380 28 100.0 32 ............................ GTGTCGATTGAGTTAAGAGCAAGGCCGTAGGC 25320 28 100.0 32 ............................ ATTATAGACGGTGCATCATTGGGTCGGATATT 25260 28 100.0 32 ............................ CAGTTGAGCCACCAGTATCTCCGCCAGTTGGT 25200 28 100.0 32 ............................ GTGCAGCGTCCAATCTAACGCGATATTAGAGC 25140 28 100.0 32 ............................ TAGCATTGCGCCCAGCTCGTTTAAATGCCCTA 25080 28 100.0 32 ............................ TCATCAGGTGAGCCAGTTTTAACCTGGTCAGT 25020 28 100.0 32 ............................ CTTTAAAATCTACAGAACGAAGGAAATCAACA 24960 28 100.0 32 ............................ GCAGCAGAGCGGAATAGAAGGGCTAGAGCCAA 24900 28 100.0 32 ............................ ACGCCGTAATCGTCAGTCATTGCATGGTCCAC 24840 28 100.0 32 ............................ GCACCAATCCACACCTTGGCAGGCTTTTCTTA 24780 28 100.0 32 ............................ TAACCTTATGCTGCTAAAATCTGCCACAACTT 24720 28 100.0 32 ............................ AAAAGAACGGAGAAGGAAAAAATGGAAACTAA 24660 28 100.0 32 ............................ AGTATTGGTCGCAATCGCTGCCAGCATTTTTT 24600 28 100.0 32 ............................ ATGTTGATCATGTGATTGATATGGTATCGGAA 24540 28 100.0 32 ............................ CCCAGGTCAGAGAACACACGTTTTAAGGCATA 24480 28 100.0 32 ............................ GTCGCTCGTCGTGTCGGTCGCTTGCACGAAAA 24420 28 100.0 32 ............................ AGCGCCCCCCTCATGCTTCGGGTAGACACTGG 24360 28 100.0 32 ............................ AATGGTTAGCAAAAGGTGGTGACGACTATAAC 24300 28 100.0 32 ............................ ACAGAGGAAGTGTCGGTGGGCAGGGTTGTTGC 24240 28 100.0 32 ............................ TTTTTGGGAGGCGTGGCGGTGACAAACTCAAA 24180 28 100.0 32 ............................ ACTAATAAGCAAGCATTTTTTTGCTGAACTGA 24120 28 100.0 32 ............................ TCCAGCTCCGTCATTTCGTCTATTTTGTTTGT 24060 28 100.0 32 ............................ GTCATATCGCCCGTGGCAATGGCGTTTCTTAG 24000 28 100.0 32 ............................ TTTTAACGTGCTATTCTCTAGAATGGGTACTA 23940 28 100.0 32 ............................ ATTGGCTGAATTGCTAGTTTGCTATACCAGTT 23880 28 100.0 32 ............................ TGTATCTCGCCAACGGAATAGGTTAAAAGCCC 23820 28 100.0 32 ............................ TGTTACAACGTCCATCATTAGCTTGTCGCCAC 23760 28 100.0 32 ............................ ATTTGGGGGCTAGACGTTACAATAGCCTGTAA 23700 28 100.0 32 ............................ TATGAAAAAACCCCTAACCCGCACCGCACAAG 23640 28 100.0 32 ............................ ATTGGCTGAATTGCTAGTTTGCTATACCAGTT 23580 28 100.0 32 ............................ TGTATCTCGCCAACGGAATAGGTTAAAAGCCC 23520 28 100.0 32 ............................ CGTTTAACACGACACTGACGCGGATTTGAACA 23460 28 96.4 32 ............A............... TGCACAATTCAGAAGCGTATTACCGTTAAAGG 23400 28 82.1 0 .......A....A....T...A..A... | ========== ====== ====== ====== ============================ ================================= ================== 45 28 99.4 32 GTTCACTGCCGAGTAGGCAGCTCAGAAA # Left flank : ATGAATTAGAAAGTTTGCAAACTACAACTTGGCTAAAAGGTATGCATGACCATGTTTTTTGCAAAGAAATACAAGCAATCCCTAGTAATACAAAGCATATTCTAGTTAAACGTGTGCAAGCTAAGTCTAGTGTCGAACGTTTAGTAAGACGTTATGCTAAACGTAAAAATATTAGTGAAAAGGAGGCACTTAGTTATTACGAAAAAACACAGCCTAAAAAGCTACGTTTACCTTTTGTAAATCTTAACAGCCAAAGCAGTAAGCAAAAGTTTTCTTTGTTTATTAAACAGAGTAAACCACAAGAAAAACCACAAGTAGGGGAGTTTAATCGCTATGGATTAAGCCAAGCTGCAACTGTTCCTTGGTTCTAACCCTTTTTTTAAAGGAAAGTAGCAGGCTAAGTAAATCAATAACTTACGCCTGTTGCTAAAAAAAGGGGATTTTTAACAAAAAGCACCAGAAGCTCTTTAAAAATGAAGGAATACACTGTATAAACTCTT # Right flank : ATCTAAGCTAAAAGAAAAAATATTATAAAATCTATTCTTTTAGACTTTTTAATATGTAATTTTTAGCTAAATTGTTGAAGTATTTGATTTAGAAGTTAAAAGGAGTGGTGCCCAGAGCGGGACTTGAACCCGCACACTCATAAGAGCGAGGGATTTTAAATCCCTTGTGTCTACCAATTCCACCATCCGGGCATTTACTACAGAGCTATTGCAGCTCTTATTTCTTACTAGACAGATCTAAAAATGGAGGCTGGAGTCGGAATCGAACCGGCGTTGACGGATTTGCAATCCGCTGCATGACCACTCTGCCATCCAGCCTTCTTGTTTCTTAATTCCAGCTTTAAATCTATTGGAGCGGGAAACGAGATTCGAACTCGCGACCCCAACCTTGGCAAGGTTGTGCTCTACCACTGAGCTATTCCCGCTCGATCTGGTTGCACATTATAGGTAGAATTTTTTCCTTGTCAACAAAATAAATGAAATTATTTATAAAAAACTTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGAGTAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGAGTAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [85.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 4-276 **** Predicted by CRISPRDetect 2.4 *** >NZ_JMLW01000027.1 Marinospirillum insulare DSM 21763 BP27DRAFT_scaffold00026.26_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 4 28 100.0 34 ............................ CCACGGTACCGATTCGGATTAGATTACTGATTAG 66 28 100.0 33 ............................ TTAGAGTTGGCCGGTTCATTCTCGAGCTGTTCT 127 28 100.0 33 ............................ TACTTAAAAAACCGGCTTCATCGTGACGCGCAT 188 28 96.4 33 ........................C... CGACACAGAAAGCTACATACAGCATGTGGCTAG 249 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 5 28 99.3 34 GTCTTCCCCACGACCGTGGGGGTGTTTC # Left flank : GTTG # Right flank : CCTATGCCGGTTTGAAGATGTGTAGCAAGGTGTAACTTGCACTTCGCTTTTCTCTACAACGATGGTTGTGCTTGCTGTCTTGCTAATGGATAGTGGCTCAGTTTTGGGTTGTTGCCCCTACGACCTTACTGAGCCACCCCTATAGAAGTTTAGCTAAACTAAGCTAGGCTAAAGCAATCATCTTTAAAAGGAGTTGATATGAATGCCCTAGATGCTAGTCACAATAAAAATATTCGTTCCGATTACGATGGCGCATGGAAAGCCGTTTTAGAGCGCTATTTCAAAGAGTTTCTTGAGCTGTTGTTTCCAGCCATTTATAACCAAGTGTATTGGAGCAAGGGTTATGAGTTTCTTGATGGTGAATTAGAGAAAATTACTGTTGATGCCAAAACAGGTCGTCGCTATACCGATAAACTGGTTAAAGTTTATTACCAAGATGGCACGGAAGAAGGAAATAGCGAAGGCCTTTTTGATTTTAGGTTAGGTTTAACTCGCTCACT # Questionable array : NO Score: 6.02 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGACCGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACGCCCGTGGGGGTGTTTC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [3.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //