Array 1 54071-55620 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHRIU010000014.1 Streptococcus equi subsp. zooepidemicus strain SEZ_19-042 tig00010807, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 54071 32 84.4 35 ........CCAT.C.................. TATATTTCTACTGGTGTAAAGCTGCCGACGACATC 54138 32 84.4 33 ........CCAT.C.................. GAGGAAGGGGCTATCAATAAGATAGTTTTAGCA 54203 32 84.4 34 ........CCAT.C.................. AGCAACCAACTCGTTAATGGCCTTTTTGGTAGCA 54269 32 84.4 35 ........CCAT.C.................. AAAAATTAGTATGCTTCAGAACGAAGGTCTTGTAA 54336 32 84.4 34 ........CCAT.C.................. ATCGTTTTTAGGTCACAAAAATAACCTTTTGTTA 54402 32 84.4 36 ........CCAT.C.................. AAAAAGCATGATACTCATTGGAAAAATCAAGACAAT 54470 32 84.4 35 ........CCAT.C.................. GTCAAAAAGGCCGCTTAAATCGCTTGTCTGATACC 54537 32 84.4 34 ........CCAT.C.................. ATCAAAAGGCTGCTCATAAGGTGCAAGATAGTAA 54603 32 100.0 35 ................................ AACAGGTGTTAAGTTTGTAGTAATGATTGTATTTG 54670 32 100.0 34 ................................ GTTTAAAATATCAGCAACTGCCTCGACTGTCACC 54736 32 100.0 33 ................................ CCTGGTGGTCAGCCTGCATTACTGGGCTTGTCT 54801 32 100.0 33 ................................ GTGTATCGCAGACATGCATTGCCTTGCGTTTCG 54866 32 100.0 34 ................................ ATCCTTGTAATCATCGACATAGATAAAGCCTTTC 54932 32 100.0 35 ................................ ATCTCTCTTCCCTCTCTCTTAACTTAATAAGTTTG 54999 32 100.0 33 ................................ TATCAAAAGTCAGTCTAGACGAATTTAAATAAC 55064 32 100.0 34 ................................ TCAGAAACAAATAGCTGAACAAATGAAGATTTCC 55130 32 100.0 32 ................................ AGATAATAGGCAACAAGAGGTGTCAGAGATTT 55194 32 100.0 33 ................................ GTGTATCGCAGACATGCATTGCCTTGCGTTTCG 55259 32 100.0 34 ................................ ATCCTTGTAATCATCGACATAGATAAAGCCTTTC 55325 32 100.0 33 ................................ TAAAAATTTTGTCTCTGTCTCCTCGATAGATCT 55390 32 100.0 36 ................................ TAATATCCAAACTCCCCACAACCGAGACAGTTTGTC 55458 32 87.5 33 ........C..TGC.................. TGCGAGATTAACTTACTGCACATGGATTTTATC 55523 32 87.5 34 ........C..TGC.................. TGTTTTTAAAGATCGCAAACAAAAAGTAAAAACT 55589 32 84.4 0 ........CCAT.C.................. | ========== ====== ====== ====== ================================ ==================================== ================== 24 32 93.1 34 GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT # Left flank : TAAGGCTATTCGAGGGGATATTGATAGCTACCCACCTTTTATGATTTAGGAGATTACTGATGATGGTATTGGTTACCTATGATGTGAATACAGAAACAGCATCAGGGCGAAAACGGCTACGTCAGGTAGCAAAATTGTGTGTTGATTATGGCCAGCGCGTGCAGCATTCGGTCTTCGAATGCTCGGTAACACCTGCTGAATTTGTTGAGATCAAGCATAAGCTGACGACGATTATTGATACGGAAGTGGATAGTATTCGTTTTTACTTGTTAGGAAAGCACTGGCAAAATCGTGTCGAGACGCTAGGGCGTTCTGATAGCTATGATCCTGATATAGGTGTCCTACTTCTGTAAAAGGAGTGAGTGCGAGCCTGGGTCACTCATAAAATGCTGTGAGACTCGCGCTAAAATAAGCTAAAAAATAGAGAAATGGGAGGTTATAGCTAAATATGTTATTAGCTAGCCTGTATCATTTCTCTATAAACTGTGCTATACTGCGCA # Right flank : TTTTGCTGCTATGCAAGGAGTGACACTGATTGAAGTTGCTCTCTTCTCGAGGGCGTGGTCCGTATCCCTGGTACTTTTCATGAAGGGATAAATCATATCACATTAATCAAGTTGATTTAAGCTTTTTATGGTACTATGTCAAATAGATAAAAATCTCTGTGTCAAGTGTAGTGGGTGACTGATAACTAAGCACGAGAGGAGACGAAGGTCGTCTTCTCTTTTGTCATGTTCAAAGCAAGCATAGATAAGTTTCTTGAAATTGTCAAAATTTATGTACCTAAAAGCATTGCATTTGATGCCTTTGATAAATTTGTTAGTCGCTTCAAGCTTGGCGTTAGAATAAGGCAGTTCAATGGCATTGATGATATAGTCGTTATAGCGTATTAAGGTGTTCAAAGCTGTTTTGAAGGGGTGATTGAGATGAGGCATAACTCAAAGAAGAGCTCTGTATTCTTTTCTTGCAAATGAAAAAGAGGCAGCTGATAAAGGTCATAATAGCC # Questionable array : NO Score: 8.79 # Score Detail : 1:0, 2:3, 3:3, 4:0.65, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.88, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT # Alternate repeat : GTCTCGCCCCATACGGGCGAGTGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.40,-2.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : NA //