Array 1 68947-71224 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJNTK010000001.1 Lactobacillus delbrueckii subsp. lactis strain NCIMB 701040 NCIMB701040-i1-1_scf1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 68947 33 100.0 34 ................................. CAGGTAGCGGCTGTGCCAGTTGTCCTTAACCAGC 69014 33 100.0 37 ................................. CTTCAAGCTCTTACCTTGCACGACTTTTGCCTGTATC 69084 33 100.0 33 ................................. CTCCTATTATTACTATTACCACTTACCAGTAAC 69150 33 100.0 33 ................................. TTACAGTGGAGCAAAAAGTGTAAAAGATTTACT 69216 33 100.0 36 ................................. ACAAATTAAGGTTATCGTTCTTGCCGCGCAGCGCTG 69285 33 100.0 37 ................................. GTATCTGGGTTGCTGATATCGGCCGTGAGCAAGACCT 69355 33 100.0 34 ................................. TTCTCGTTCCAGATGTACTGGTAGATTTCATCGA 69422 33 100.0 35 ................................. AACGCTCCTACGGCGTAATCGGCGACCCGGAAAAG 69490 33 100.0 34 ................................. GGTGATAACCTCTGCGGCGTATTCCCGCTTTTGG 69557 33 100.0 35 ................................. TTCTGGCCACCTTGGCCAGCATGGATAACGGCGGT 69625 33 100.0 33 ................................. CCTGCAACTAAATCCTGTGTAAAAGCCGTGCTG 69691 33 100.0 36 ................................. TACAACAGCGGATCTTTGGGATGCTGATCGACGCTC 69760 33 100.0 37 ................................. TGGCGACTATGATATGCACGACTACCGGATGCTCTAC 69830 33 97.0 36 ..A.............................. CAACCAAGACGACAGGCAAGTACGTTTGGAGCAGAT 69899 33 100.0 36 ................................. TGTATCAGTAATCGATCCATCCACTGACAGATCAGG 69968 33 100.0 35 ................................. AACTTGATGGCAAGACTTATCCGGTCTACGCTAAC 70036 33 100.0 36 ................................. GTCGTTGATGTAGCGATAGTCGTACATCTCCGTGCC 70105 33 100.0 34 ................................. TCAATCCATGCACTGAGAGTAACCGTTTGCCCAT 70172 33 100.0 36 ................................. CATCTGGAGCAGGTCTGCCTTGACTTCCAAGCGGTT 70241 33 100.0 33 ................................. GCAGAGATCGGTGACTTTATCGGACAAGGTCTT 70307 33 100.0 35 ................................. AGTCGATCACTGAAGGCGACGTATCCGTATCCTTT 70375 33 100.0 35 ................................. AGTCGATCACTGAAGGCGACGTATCCGTATCCTTT 70443 33 100.0 35 ................................. CCGCATAACTGGCAGACAGGTTATTTTATTGACAC 70511 33 100.0 35 ................................. AGTCGATCACTGAAGGCGACGTATCCGTATCCTTT 70579 33 100.0 34 ................................. AACTCCATTGCTGGCGGAGCTATGGTCGGCAACT 70646 33 100.0 35 ................................. ACAGGCATGGCTACGCAGTTCAAGACCATGGGTGA 70714 33 100.0 36 ................................. CAGTACTCAAAACGGTCTGCGAACTCGCAAAGCGCC 70783 33 100.0 36 ................................. ACGACTGCCAAGGGCAGCACAATTGCTCGCTGGGGA 70852 33 100.0 34 ................................. TTTATTGGCACGACACCACCGCCTAATCCATCAA 70919 33 100.0 36 ................................. GAATCCGCCATAGGTCTTAGCCCGGCTCCTATCACC 70988 33 100.0 37 ................................. CAAGAGCCCGGCCTTTTTCCCACATTACATTGTGTGT 71058 33 100.0 34 ................................. TTGCCCTTGATCGTCATGACCTTGGCCGTCTTCC 71125 33 100.0 34 ................................. ATTTGCTGGTACAAAAGTAACAGAGTTACAACAA 71192 33 84.8 0 ..........A...AA....T......C..... | ========== ====== ====== ====== ================================= ===================================== ================== 34 33 99.5 35 GTCGCATCCCGCATGGGATGCGTGGATTGAAAT # Left flank : CGGATACCCTCCGTTTTTATGGAAGTAAGTGATTGTAGATGATGATGGTAATTGTCAGTTATGACGTGAATACTGAAACTGCTTCGGGAAAGAAGAGACTAAGAAATGTTTCCAAAATATGTAACGACTATGGCCAAAGAGTTCAAAATTCAGTATTTGAGTGTCTTGTAGATTCTACAAAGCTTGAGGAAATGAAGGAACGCTTACTAAAGGTATATGATGAAGAGTGCGACAGCTTGTACTTCTTCAATGTAGGCAAAAAATATGAGAACAAAGTTCAGTCTTATGGGTGTAAACAAGTATTAGACTTGGGAAAGCCAGTTGTCTTCTAATTATCTAGACAGTGCGAGTGTGAAGCTAACAGAATTAGGCAGAGGATTCGCACTGTTTTTGACTATTTTTTTGTAGTCTTGAATATAAAATTGCAGTTTTTTAATGCTTTTTATATTTTGTATGCCCAATATTTAGCTGTGAAAATGCTTTTTTTACTAAATGTTGCG # Right flank : TATCGCTTAGATATGTGGATGCTTGATGGTCAAATTCCACTAAAAGCACTCCCTAGCGGGGTGCTTTTTAATATTTCGCTAAATCAAACGCTTCACCAAGCAAGCAGGAAAAGATTATAGTAAAATATACTGGTTATAAAAAAGCTGAGCCAAGCTCAGCATCCCCAAAACAAAACTTAGTTGAGGAGAACAAACACATGCAAGATATTTATATTGTTGCGGCCAAGCGAACTCCATTTGGCCGTTACCACAAGCAATTGGCTGACTTTTCCGCCATCGACCTGGGACAAATCGCCCTGCACGGCGCATTAAAAGAAGCCGGCCTTGACGCCGAAGCCCTGGATGCCCTCTTCATGGGCAATGTCCTGTCTGCCGGCTTAGGCCAAAACATGGCCCGGCAAATTGCTTTAAACGCCGGGATGCGGCAGGACTCAGTCGCCGTGTCCATCAACGAAGTCTGCGGTTCCAGCCTCAAGGCTGCCCGCCTGGCTGAAGCTCAA # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCCGCATGGGATGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCATCCCGCATGGGATGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-9.40,-9.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //