Array 1 115091-116843 **** Predicted by CRISPRDetect 2.4 *** >NZ_FZMV01000008.1 Helicobacter pullorum isolate 35818_9, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 115091 36 100.0 30 .................................... TCAGCATGACCAAAAATCCTACTATTTGTG 115157 36 100.0 30 .................................... TTAGCATGACCAAAAATCCTACTATTTGTG 115223 36 100.0 30 .................................... CTCAACAAGAACATTATCAAAAAGAGACTT 115289 36 100.0 30 .................................... AATTTCGGTTTTATTGTTCCCACTTCTTTT 115355 36 100.0 30 .................................... CATTATGGCTTTGTTGTTCCCACTTCTTTT 115421 36 100.0 30 .................................... CCGGTTCTTTAGCTGATTATTTTGGTTTTC 115487 36 100.0 30 .................................... CCTCGTATGATTATTTCAAAATAGGAGGTT 115553 36 100.0 30 .................................... TCAGTATGACTAAAAATCCTACTATTTGTG 115619 36 100.0 31 .................................... TCCATTGATGCACGAAGTTTATTTCTACACG 115686 36 100.0 30 .................................... GGCGAAATGTATGTTCTTCCTAAAGATATG 115752 36 100.0 30 .................................... TTATGTTCGTCTAGACCCATTCGGCTATAC 115818 36 100.0 30 .................................... GTCTTATCACAGCTTTTTAATTATGCTTGA 115884 36 100.0 30 .................................... CAAGCGAAATACGAAAAGACCACTCATTCG 115950 36 100.0 30 .................................... TTCCTTTTTTGTTGCAACCAACGCTTCCTG 116016 36 100.0 30 .................................... AATAGGGTCTTTAACCATAACAGAATACCA 116082 36 100.0 30 .................................... CTGATGCTACAACTATTCCTGTAGTATTAG 116148 36 100.0 30 .................................... CTTTCTGTTAGGCCTAAAGCAGTTTATACA 116214 36 100.0 30 .................................... CACTCAAAAAACCTTTTTTAAAAGCATTTT 116280 36 100.0 30 .................................... GAAGAAGATAGAAGCGATATTAGTGAAACA 116346 36 100.0 30 .................................... AGTTGCATTCTCATCGGCAGTATTTATATG 116412 36 100.0 30 .................................... GACGCAGAAGATTGCGACGCAGGAGGATTC 116478 36 100.0 30 .................................... ACTGTCACTCCTAATAAAAATTGGCAGACG 116544 36 100.0 30 .................................... TTTGGGATAACTGGGAAGATTTTATAACAG 116610 36 100.0 30 .................................... ATATAAATCACTTTCTTGCACATTTTTATA 116676 36 100.0 30 .................................... TGATAATCTAGTAGCTCTCAAATCAACAAG 116742 36 100.0 30 .................................... AGCTATCAAGATAAGGTTTATCAATGCGAG 116808 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 27 36 100.0 30 ATTTTAGCATAGAAAGATTTAAAAAGGGACTAAAAC # Left flank : GGGGGAGTATCCGCTGTCTTATTATCACAGAGAAGCAGTTTGATTCTATGGAGATTTTGCTAGGTGGGGTGGGATTCAATGAGATGATGAATGAGCCAAGAAATCTCGTGCTTTTTGGGTTTGATGAGAAAAAGGGAGAGTATGTGTATGCGGATAATGGTAAAGATAGCGATGAAGAGAAGTTGTTGCAATCAAAATTAAAGAAAGCAAGAAATATACAAGGAAGTTTATTTGAGTTTTGAAGATAGAATGGTGTGCTACTTAGGATAATATGTGTAGAATAGTAACAATATGGGGAATATAAAAAACAATAAAATGTGAAAAGTGTTATGTAATATAAAGTAAAAAAGTCTTGGCAAAAAGGGATTTTTGGAGGTTTTTAATCTCACACCCTGCACCTTTACTCCTAGTATTGCCAAGAAATACTTAGGTAGGTTTATTTTAGTCCCTTTTTAAATCTTCTTTTGCTATTGTAGCATAAAATCCCAATTTTTTGGTCT # Right flank : CATATCAGGCTGGGATGTAAGGTCTGTGCTATGCCTACCTTCACTCCTAGCAAATCACTTAGCTCATAACTAAGGCGATTTGCAGGGATTGCCCCTTAAGCGTTCCCCACTCTTATTTTTATGAGTTTATTTATAGTCTTTACCTGATTATTCAACTTGACTTTTGCATATAAATAAACTATAATTACCACAACCAAGCAAACATAGCATTGGGCTCATAACCTAAGAGGAAGCTGGGAGCTTGGTTATCTCTCCTAGTATTTTTTTGTCAATTTTGCCCTTTCCAAAATACATATTTTTATAACTTAGCTCATTTTGTTTCTTTCGTATCTGCTCTATTACCACATAAAAATCATCACTTACTTGTTTAGCACTCACTAATACTTGGTTATTGCTTTTATCTAGGCTTTTGCCTTTAAAATCTGCATTATCTGAGTATTCTTGGTATTTTGCTATTTCCTCTAAAGTTACAGGTTTTTGACCACTGAGCTTAACTAAAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTTAGCATAGAAAGATTTAAAAAGGGACTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA //