Array 1 33966-34551 **** Predicted by CRISPRDetect 2.4 *** >NZ_JNKX01000030.1 Bacteroides sp. Ga6A2 T538DRAFT_scaffold00024.24_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================ ================== 33966 37 100.0 32 ..................................... GTATTGGATACGGCGCTTTCAGTTACTGTTCT 34035 37 97.3 32 ................A.................... CCATTGAATACCGCACTTTCATTTACTGTCCT 34104 37 100.0 32 ..................................... CCATTGGAGACAACGCTTTCTCTGGTTGCACG 34173 37 100.0 32 ..................................... CCATCGGATCCCACGCTTTCAGTTACTGTTCT 34242 37 89.2 29 .A.....................A..C........C. GCATCGAAGACGGGGTTTTCTCTGGCTGC 34308 37 89.2 32 .....A....................C.AT....... ACATCGGAGACTACGCTTTTGCTAGCTGCTCG 34377 37 94.6 32 ............G.............C.......... GAATCGGATCCGGCGCTTTCTATGGATGCACG 34446 37 97.3 32 ..........................C.......... GAATCGGAGACAAGGCTTTCTATGGATGCACG 34515 37 97.3 0 ..........................C.......... | ========== ====== ====== ====== ===================================== ================================ ================== 9 37 96.1 32 GGACTTACATCCATTACTATACCGAATAGCGTGACTA # Left flank : CTAGCATTGGAGAATACGCTTTCCAATACTGTCCTGAACTTACATCCATTACTTTACCTAACAGCGTGACTAGCATTGGAGAATACGCTTTCCAATACTGCTCTGGACTCACATCCATTACTATACCAAACAGCGTAATTAGCATTGAAAATAGTGTTTTCTCTGGCTGCACGGGACTTACATCCATCACTATACCGAATAGCGTGACTAGCATTGGACAATACGCTTTCTCTGGATGCACGGGACTTACATCCATTACTATACCGAACAGCGTGACTAACATTGGAGAAGACGCTTTCTATGACTGCTATGTAACAAAAGAAAACTTTCACAATCAAAGCAATATCACCCCTTCAGGATTAACTGTTTGTGATGTAAGAACAGAATCAGGCATTTGTATAAAAGGCAATGCTCTTGTAAGGTATCTAGGAAAAGAGACAACTTATTCTATTCCAAACAGTATTACTAACATTGGTGAAAGAGCTTTCCAAGACTGCTCT # Right flank : AACATTGGAGAAGACGCTTTCTATGACTGCAAGAACTTAAAAACTGTTTACTGTTACGCAACAAAATTACCAGAAACAAACGAAAACGCATTCGGTATTCATGGCACCATAAATTACGCCACTCTCTATGTTCCAGCCTCTGCTATTAACGAATACAAAGCAATTGCTCCATGGAGGTGGTTTGGCAAAATTCTGCCAATAGAGGATGCAACAACACAAATAGATGCAACATCAACAAACGATTATAACATAGTAGCCAACGGAAGCAATATCATAGTAAAAAGCGATGCTGATGGCGAAAAGGTAAGCATATATACCATTAACGGGCAATTGATTGGCACAACTGCTATAAGAAACGGTTCAGCCGTAATTAACACAAACTTAAAATCGGGTTCTGTTGCAATCGTAAAGATTGGGCAAAATACTTACAAAATCCGTTTAGATTGATATTTTTTAAGATAAAGACCACGCCATTACAAAAAGCGTGGTCTTATCTTTTT # Questionable array : NO Score: 2.65 # Score Detail : 1:0, 2:0, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.59, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGACTTACATCCATTACTATACCGAATAGCGTGACTA # Alternate repeat : GGACTTACATCCATTACTATACCGAACAGCGTGACTA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.40,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 1 90086-90336 **** Predicted by CRISPRDetect 2.4 *** >NZ_JNKX01000008.1 Bacteroides sp. Ga6A2 T538DRAFT_scaffold00005.5_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================ ================== 90086 29 100.0 45 ............................. TCACCAAACTCATTGTAATGTCCCTGCATCGTCCAGCCTCTGAGA 90160 29 100.0 48 ............................. AAGGAAGCAATGCGAGTTAGCAAGTGAATTGAGGTGTTTTCTCTGATA 90237 29 96.6 42 .....A....................... ACCATAAGGGTCAATATCATCAAAATCTCTGTCACTCTGAGA 90308 29 82.8 0 ....CA...............T....AT. | ========== ====== ====== ====== ============================= ================================================ ================== 4 29 94.9 45 GCATTTTCCATTAAAACAAGGATTAAGAC # Left flank : GCATCGCAATAGCAGCCAGCGTTTCTATGATTCTGCCAATCTCTACTCCTCCTAACGCCATTGCCCACTCAACGGGCTTCATCAAGCAGAACGATATGATGCTTGTCGGCGTTATCATGGGTGTGCTTGGCTTGGTAATAGGCTATTGCTGGATGTTCCTTGTGTTCTGAACATAAGTAATAAAAATAGATTTTTTTTCAGGCTCGCGTCTTTGTGAAAAGGTGCGGGTCTTTTTTTTGTGTGCCGTTTCTTTGATTTTTTACATAACCTCATCCCGAACGAATCCCGAAGGCATCCCGAAGAATCTATTTTTAGTGTGAAAAATAAATAGACAAGGTATAAAAATACCATAAAATATATTTTCTCGAATAAAAAAATATCGCTAATTTTGCAAACGAAAATTAAGGGTTGTATTCTTTGTACTTTTTTGTGCCATTCTTTTAGGGTGGTGTGACTAAGTTACTGATAGATAATTACTTTTATTTTCTGCTCCTCTGAGG # Right flank : CATCTTTTTTATCTGGCTTTATTTGTAGCTTTGCTATGTCGAGAATGGTTTTGCTTATCAACGCCAAGGATGAGTGAAAACTAACACATGGTAAGGCTATGGGGATTTTTTTGTTGCTTAGAAACATATAAAGGATGTTAACTAAACAGTAGCGTATTTTGCTTAAATATTTTATATTTGCCGTTGTTTATAATTGATAAAATCGTTAAATATGGGAAAACATTACACTTATACAATGAAAGTTGGCGATAAAAAATTAACTTTAAAAGACTTTAAACCAATATTCGATGAATATAACAAAAAATATTTTTATGGGAAATTAGGCGATTGCCGATTTATGTGGCTTCACCCTAAAGCCGCTTTAGGAAAATATATGTATGATAATGGAGTTTCAACAATTGGTTTTAATCGCAAACCAAACCATCCTGTCACAGATGAATATCTTGAAGAGGTCATGATACACGAAATGATACACATGTATGTCAGAACGATTGAAAACG # Questionable array : NO Score: 5.61 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCATTTTCCATTAAAACAAGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 1 65294-65717 **** Predicted by CRISPRDetect 2.4 *** >NZ_JNKX01000011.1 Bacteroides sp. Ga6A2 T538DRAFT_scaffold00007.7_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 65294 30 96.7 36 ..........T................... GATTCTTTCTGTGTGCTTCGAGGTTCTTAATCTTCA 65360 30 96.7 35 ..........T................... TAACATACCCACACACCGCAGCTATCTTTCAGCCG 65425 30 100.0 34 .............................. ATGATTATCTCGAACTTGATTAAGGTTGTGCGTG 65489 30 100.0 34 .............................. TCTCTTCGGCTTTGGCAAGTGCCCTTGTCTCTGC 65553 30 100.0 37 .............................. TACACATCGCCCACCTTCAGCGGTGCGCGGCAAGTCT 65620 30 100.0 38 .............................. AGACTATGCGCGTCATCGAAGCAATAAAGGCAAAGACA 65688 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 7 30 99.1 36 ATTCTAATCGAACCATAGTGGAATTGAAAC # Left flank : AGGTTTGCAAACGCAAACTTTGGCTCTTTGCCAACGGAATTAATATGGAGTTATGTATGGAGAAACGAGTTGCAAAGATGCTAAAACTGTGTCGCAAATATTTAAATTGGGTTCAGAATTCTGTCTTTGAAGGAGAAATAACCGAATTTCAACTAATACAGTTAGAAGCATCTGCTAAAAAATTTATGGATCCAGACATTGACAGCATAATAGTATTCTCATCGCGCTCGCAAATGTTTATGGATAAGCGTATTATAGGCGCAGAACGAAATCCAATTGATAATTTTCTATAACCTCTTAGGTTGTCGAACTACATTTTTTAGTTATTCTTACGCCAACAAAAAACTTTAACAAGGTATATTTTTCGTTCTAATACTCTGATTAAAAAACAGTTGTCGATCTTCGGCATTTTTTTATCATTACACATTGACATTTCTTTCAGATTATTTTTGTAATTTTGCACTTGATTTCATGGGGCTTTCAGCCCTATTGTTGTCAGC # Right flank : CAAGGTCTATCTCTCCAGTCCACTTAATGCAGATTTTCATAAATAAAAAACAGATAGTACCACCATCCGCAAGGATAGCGACACTATCTGTTTTTATTAGTGAGTTCAACACCTCTACTATCTTTGTGTTATATTATATCACAACTCCCTTATTATCTTGTCAAACTCGTCGGCCTTGCCGTTGTTGCCGGTTAACTTCTGCAACAACTTTTTGCGGACTTTTGTGACGGCTGTCGGACTTCTGCCTATCAAAACCGAAATCTCTGACGGACCGAAGCCGAGGCGGATAAGCGTGCAGATATAAATATCCTGTATCGAAATCTCCGGAATGTTGGTTCGTATGTATGATGTGAACTTCGGATTCTTCTCGTCCACGGCATTCAGGAGTTGCAGAAGCATATCGTCGGCGGCAATCTGACCTCCTCGGGCAAGCGCGTGAAGTTCGTTGCACAGCGAGCCGCCAGCCATATCAGCCATGAAAGCCTGCGTTTCCTGCTCGC # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCTAATCGAACCATAGTGGAATTGAAAC # Alternate repeat : ATTCTAATCGTACCATAGTGGAATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : NA //